Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014860 Daucus carota HOM05D007420 ORTHO05D009353 7.8e-36 153.3 79 100.0
Actinidia22015 Actinidia chinensis HOM05D007420 ORTHO05D009353 7.1e-21 103.6 74 71.6
HanXRQChr03g0062071 Helianthus annuus HOM05D007420 ORTHO05D009353 1.3e-19 99.4 71 73.2
Lj4g0001906 Lotus japonicus HOM05D007420 ORTHO05D009353 1.7e-19 99.0 71 69.0
Eucgr.L02717 Eucalyptus grandis HOM05D007420 ORTHO05D009353 2.3e-19 98.6 75 69.3
Glyma.05G010400 Glycine max HOM05D007420 ORTHO05D009353 2.3e-19 98.6 71 70.4
arahy.Tifrunner.gnm1.ann1.QR7ILI Arachis hypogaea HOM05D007420 ORTHO05D009353 3.0e-19 98.2 69 71.0
arahy.Tifrunner.gnm1.ann1.XPL4AE Arachis hypogaea HOM05D007420 ORTHO05D009353 3.0e-19 98.2 69 71.0
FAN23G1905 Fragaria x ananassa HOM05D007420 ORTHO05D009353 3.9e-19 97.8 70 71.4
FAN26G1322 Fragaria x ananassa HOM05D007420 ORTHO05D009353 3.9e-19 97.8 70 71.4
FAN28G1248 Fragaria x ananassa HOM05D007420 ORTHO05D009353 3.9e-19 97.8 70 71.4
TPR.G9078 Trifolium pratense HOM05D007420 ORTHO05D009353 3.9e-19 97.8 67 70.1
Oeu021594.1 Olea europaea HOM05D007420 ORTHO05D009353 5.1e-19 97.4 59 79.7
FAN22G2307 Fragaria x ananassa HOM05D022909 ORTHO05D009353 6.6e-19 97.1 70 71.4
ECA240G1805 Erigeron canadensis HOM05D007420 ORTHO05D009353 8.7e-19 96.7 61 73.8
Eucgr.C01298 Eucalyptus grandis HOM05D007420 ORTHO05D009353 8.7e-19 96.7 71 70.4
RcHm_v2.0_Chr2g0089401 Rosa chinensis HOM05D007420 ORTHO05D009353 8.7e-19 96.7 67 71.6
SalBow1G2150 Salvia bowleyana HOM05D007420 ORTHO05D009353 1.1e-18 96.3 54 88.9
Dinv36572 Davidia involucrata HOM05D007420 ORTHO05D009353 1.5e-18 95.9 71 67.6
Aa31sc12G90 Aethionema arabicum HOM05D007420 ORTHO05D009353 3.3e-18 94.7 71 63.4
SalBow6G6280 Salvia bowleyana HOM05D007420 ORTHO05D009353 5.6e-18 94.0 59 76.3
Psat4g040560 Pisum sativum HOM05D007420 ORTHO05D009353 7.3e-18 93.6 69 69.6
MD02G1037600 Malus domestica HOM05D007420 ORTHO05D009353 9.6e-18 93.2 74 66.2
A07p31870 Brassica napus HOM05D007420 ORTHO05D009353 1.3e-17 92.8 71 69.0
Migut.L01525 Erythranthe guttata HOM05D007420 ORTHO05D009353 1.3e-17 92.8 64 75.0
FAN19G3121 Fragaria x ananassa HOM05D007420 ORTHO05D009353 1.3e-17 92.8 65 69.2
MELO3C004528.2 Cucumis melo HOM05D007420 ORTHO05D009353 2.8e-17 91.7 59 69.5
Gorai.010G066200 Gossypium raimondii HOM05D007420 ORTHO05D009353 2.8e-17 91.7 75 62.7
Thecc.09G120400 Theobroma cacao HOM05D007420 ORTHO05D009353 2.8e-17 91.7 65 66.2
CDE01G0426 Ceratophyllum demersum HOM05D007420 ORTHO05D009353 3.6e-17 91.3 68 69.1
unitig_85.g27256 Utricularia gibba HOM05D000953 ORTHO05D000231 3.6e-17 91.3 55 78.2
Cc06_g08970 Coffea canephora HOM05D007420 ORTHO05D009353 4.8e-17 90.9 58 75.9
TWI32G1185 Tripterygium wilfordii HOM05D007420 ORTHO05D009353 6.2e-17 90.5 56 75.0
Ciclev10009973m.g Citrus clementina HOM05D007420 ORTHO05D009353 1.1e-16 89.7 73 64.4
FvH4_1g03930 Fragaria vesca HOM05D007420 ORTHO05D009353 1.1e-16 89.7 67 68.7
Nitab4.5_0000750g0050 Nicotiana tabacum HOM05D007420 ORTHO05D009353 1.1e-16 89.7 71 63.4
Potri.011G024500 Populus trichocarpa HOM05D007420 ORTHO05D009353 1.1e-16 89.7 69 68.1
HPP92_024085 Vanilla planifolia HOM05D007420 ORTHO05D009353 1.1e-16 89.7 71 60.6
Atru.chr7.1239 Acer truncatum HOM05D007420 ORTHO05D009353 1.4e-16 89.4 67 65.7
Hma1.2p1_0018F.1_g012820 Hydrangea macrophylla HOM05D007420 ORTHO05D009353 1.4e-16 89.4 71 66.2
TWI34G1269 Tripterygium wilfordii HOM05D007420 ORTHO05D009353 1.4e-16 89.4 56 75.0
Cfa003340 Carpinus fangiana HOM05D007420 ORTHO05D009353 1.8e-16 89.0 69 62.3
Eucgr.C01109 Eucalyptus grandis HOM05D007420 ORTHO05D009353 1.8e-16 89.0 68 69.1
THA.LOC104809007 Tarenaya hassleriana HOM05D007420 ORTHO05D009353 1.8e-16 89.0 71 64.8
PSO170G5167 Papaver somniferum HOM05D007420 ORTHO05D009353 2.4e-16 88.6 52 80.8
Phvul.003G161000 Phaseolus vulgaris HOM05D007420 ORTHO05D009353 3.1e-16 88.2 68 66.2
CSS0016223 Camellia sinensis var. sinensis HOM05D007420 ORTHO05D009353 4.0e-16 87.8 68 66.2
CANSAT56G4260 Cannabis sativa HOM05D007420 ORTHO05D009353 4.0e-16 87.8 67 65.7
Thhalv10019233m.g Eutrema salsugineum HOM05D007420 ORTHO05D009353 4.0e-16 87.8 68 69.1
BcaB03g15440 Brassica carinata HOM05D007420 ORTHO05D009353 5.3e-16 87.4 68 69.1
BcaC08g45947 Brassica carinata HOM05D007420 ORTHO05D009353 5.3e-16 87.4 68 69.1
C06p37440 Brassica napus HOM05D007420 ORTHO05D032647 5.3e-16 87.4 68 69.1
BolC6t38847H Brassica oleracea HOM05D007420 ORTHO05D009353 5.3e-16 87.4 68 69.1
CDE03G0079 Ceratophyllum demersum HOM05D007420 ORTHO05D009353 5.3e-16 87.4 68 67.6
AUR62033448 Chenopodium quinoa HOM05D007420 ORTHO05D009353 5.3e-16 87.4 69 63.8
MD15G1177800 Malus domestica HOM05D007420 ORTHO05D009353 5.3e-16 87.4 68 69.1
AT1G68680 Arabidopsis thaliana HOM05D007420 ORTHO05D009353 6.9e-16 87.0 68 67.6
BraA07t30816Z Brassica rapa HOM05D007420 ORTHO05D009353 6.9e-16 87.0 69 68.1
CiPaw.03G239800 Carya illinoinensis HOM05D007420 ORTHO05D009353 6.9e-16 87.0 67 64.2
Hund09157 Selenicereus undatus HOM05D007420 ORTHO05D009353 6.9e-16 87.0 67 67.2
Sc14g0000270 Simmondsia chinensis HOM05D007420 ORTHO05D009353 6.9e-16 87.0 65 64.6
QL02p087339 Quercus lobata HOM05D007420 ORTHO05D009353 9.0e-16 86.7 67 65.7
AL2G27600 Arabidopsis lyrata HOM05D007420 ORTHO05D009353 1.2e-15 86.3 68 67.6
Sp5g23780 Schrenkiella parvula HOM05D007420 ORTHO05D009353 1.2e-15 86.3 68 67.6
Lalb_Chr13g0302091 Lupinus albus HOM05D007420 ORTHO05D009353 1.5e-15 85.9 68 64.7
SEGI_24866 Sequoiadendron giganteum HOM05D007420 ORTHO05D009353 2.0e-15 85.5 71 60.6
vmacro20648 Vaccinium macrocarpon HOM05D007420 ORTHO05D009353 2.0e-15 85.5 69 65.2
Eucgr.C01288 Eucalyptus grandis HOM05D007420 ORTHO05D009353 2.6e-15 85.1 59 69.5
Nitab4.5_0001193g0010 Nicotiana tabacum HOM05D007420 ORTHO05D009353 2.6e-15 85.1 68 63.2
Prupe.7G237700 Prunus persica HOM05D007420 ORTHO05D009353 2.6e-15 85.1 71 62.0
Sabra11G0015300 Salix brachista HOM05D007420 ORTHO05D009353 2.6e-15 85.1 69 65.2
Gohir.A06G058200 Gossypium hirsutum HOM05D007420 ORTHO05D009353 3.4e-15 84.7 68 64.7
Gohir.D06G056500 Gossypium hirsutum HOM05D007420 ORTHO05D009353 3.4e-15 84.7 68 64.7
CARHR061490 Cardamine hirsuta HOM05D007420 ORTHO05D009353 4.5e-15 84.3 68 66.2
BcaB03g15439 Brassica carinata HOM05D007420 ORTHO05D009353 9.9e-15 83.2 67 67.2
Haze_25622 Corylus avellana HOM05D007420 ORTHO05D009353 1.3e-14 82.8 67 61.2
Carub.0002s1522 Capsella rubella HOM05D007420 ORTHO05D009353 1.7e-14 82.4 68 64.7
Manes.06G052500 Manihot esculenta HOM05D007420 ORTHO05D009353 2.2e-14 82.0 68 63.2
Peaxi162Scf00361g00611 Petunia axillaris HOM05D007420 ORTHO05D009353 2.9e-14 81.6 53 69.8
CsaV3_2G002630 Cucumis sativus L. HOM05D007420 ORTHO05D009353 3.8e-14 81.3 52 73.1
Hma1.2p1_0018F.1_g012830 Hydrangea macrophylla HOM05D007420 ORTHO05D009353 4.9e-14 80.9 55 70.9
Sed0006703 Sechium edule HOM05D007420 ORTHO05D009353 6.4e-14 80.5 68 63.2
CAN.G1424.4 Capsicum annuum HOM05D007420 ORTHO05D009353 8.4e-14 80.1 66 63.6
ClCG11G002810 Citrullus lanatus HOM05D007420 ORTHO05D009353 1.1e-13 79.7 64 62.5
Nn2g11931 Nelumbo nucifera HOM05D007420 ORTHO05D009353 1.1e-13 79.7 68 61.8
PGR102G0502 Punica granatum HOM05D007420 ORTHO05D009353 1.1e-13 79.7 69 60.9
Nn8g39361 Nelumbo nucifera HOM05D007420 ORTHO05D009353 1.4e-13 79.3 67 59.7
Zm00001eb283090 Zea mays HOM05D007420 ORTHO05D009353 1.9e-13 79.0 53 69.8
Solyc07g005430.3 Solanum lycopersicum HOM05D007420 ORTHO05D009353 2.4e-13 78.6 71 59.2
Sopen07g001360 Solanum pennellii HOM05D007420 ORTHO05D009353 2.4e-13 78.6 71 59.2
EL10Ac8g18588 Beta vulgaris HOM05D007420 ORTHO05D009353 5.4e-13 77.4 68 58.8
Duzib150G1214 Durio zibethinus HOM05D007420 ORTHO05D009353 5.4e-13 77.4 47 78.7
PGSC0003DMG401011174 Solanum tuberosum HOM05D007420 ORTHO05D009353 2.1e-12 75.5 97 48.5
GSVIVG01015481001 Vitis vinifera HOM05D007420 ORTHO05D009353 2.7e-12 75.1 71 57.7
SHI28897 Sapria himalayana HOM05D007420 ORTHO05D009353 3.5e-12 74.7 66 54.5
Mapoly0048s0106 Marchantia polymorpha HOM05D007420 ORTHO05D009353 1.3e-11 72.8 71 53.5
CBR_g3296 Chara braunii HOM05D007420 ORTHO05D009353 1.8e-11 72.4 54 61.1
AagrBONN_evm.TU.Sc2ySwM_362.2614 Anthoceros agrestis HOM05D007420 ORTHO05D009353 3.9e-11 71.2 53 64.2
Os05g0176600 Oryza sativa ssp. japonica HOM05D007420 ORTHO05D009353 5.1e-11 70.9 43 79.1
Pp3c11_6600 Physcomitrium patens HOM05D007420 ORTHO05D009353 1.9e-10 68.9 56 55.4
Glyma.13G033951 Glycine max HOM05D007420 ORTHO05D009353 3.4e-07 58.2 35 74.3
Eucgr.C01292 Eucalyptus grandis HOM05D007420 ORTHO05D009353 2.2e-06 55.5 33 78.8
MCO15G341 Micromonas commoda HOM05D007420 ORTHO05D009353 6.4e-06 53.9 78 41.0


User provided reference genes

Program Settings