Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 3.3e-292 1007.7 512 100.0
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 1.8e-194 682.9 512 67.4
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 4.1e-194 681.8 513 65.7
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 1.5e-191 673.3 551 63.7
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 4.0e-189 665.2 513 64.5
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 1.5e-188 663.3 512 65.8
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.8e-187 659.1 513 64.1
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 5.9e-185 651.4 513 62.8
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 7.2e-183 644.4 512 62.1
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 2.7e-182 642.5 513 62.0
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 3.6e-182 642.1 513 63.5
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 4.7e-182 641.7 513 63.2
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 8.0e-182 641.0 525 61.7
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 8.0e-182 641.0 513 62.6
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 8.0e-182 641.0 513 63.4
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 1.4e-181 640.2 531 61.4
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 1.4e-181 640.2 512 62.7
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 3.0e-181 639.0 514 63.8
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 3.0e-181 639.0 513 63.4
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 4.0e-181 638.6 513 62.0
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 8.8e-181 637.5 513 61.8
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 2.0e-180 636.3 513 61.6
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 2.0e-180 636.3 513 62.4
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 3.4e-180 635.6 514 63.0
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 6.3e-179 631.3 514 61.5
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 1.2e-177 627.1 524 62.0
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 3.5e-177 625.5 554 57.0
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 7.7e-177 624.4 513 60.8
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 7.7e-177 624.4 512 60.0
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 2.9e-176 622.5 513 61.6
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 5.0e-176 621.7 513 60.6
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 6.6e-176 621.3 513 62.0
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 6.6e-176 621.3 513 59.1
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 1.1e-175 620.5 512 59.8
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 1.9e-175 619.8 513 61.0
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 3.3e-175 619.0 514 59.3
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 5.6e-175 618.2 514 61.3
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 9.5e-175 617.5 512 60.2
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 3.6e-174 615.5 513 60.6
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 1.4e-173 613.6 514 59.5
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.3e-173 612.8 514 61.1
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 2.3e-173 612.8 510 59.0
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 3.0e-173 612.5 517 60.0
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 8.9e-173 610.9 513 59.6
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 8.9e-173 610.9 513 60.4
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 1.2e-172 610.5 516 59.5
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 1.2e-172 610.5 512 60.2
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 1.5e-172 610.1 512 60.4
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 4.4e-172 608.6 507 60.0
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 9.8e-172 607.4 512 58.0
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 2.2e-171 606.3 513 60.4
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 4.9e-171 605.1 518 59.3
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 8.3e-171 604.4 513 58.9
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 1.8e-170 603.2 521 58.2
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 2.4e-170 602.8 496 62.3
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 3.2e-170 602.4 513 59.8
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 5.4e-170 601.7 515 59.4
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 7.0e-170 601.3 513 58.9
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 7.0e-170 601.3 513 59.1
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 9.2e-170 600.9 516 59.1
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 4.6e-169 598.6 513 59.6
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 2.3e-168 596.3 515 57.7
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 1.5e-167 593.6 516 59.1
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 1.9e-167 593.2 516 57.9
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 3.3e-167 592.4 517 58.6
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 9.5e-167 590.9 516 58.5
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 3.6e-166 589.0 513 58.5
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 8.0e-166 587.8 521 57.4
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 1.8e-165 586.6 517 58.0
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 1.8e-165 586.6 516 57.6
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 2.3e-165 586.3 513 58.5
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 6.8e-165 584.7 516 57.2
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 6.8e-165 584.7 513 57.9
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 6.8e-165 584.7 513 57.9
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 5.8e-164 581.6 462 64.9
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 7.5e-164 581.3 462 64.5
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 1.7e-163 580.1 428 68.7
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 3.7e-163 578.9 544 57.4
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 6.4e-163 578.2 513 57.1
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 6.4e-163 578.2 518 57.3
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 9.2e-162 574.3 523 58.3
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 1.2e-161 573.9 439 66.7
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 1.0e-160 570.9 500 58.2
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 2.8e-158 562.8 586 51.4
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 3.6e-158 562.4 539 57.5
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 6.8e-157 558.1 488 57.8
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 2.0e-156 556.6 591 51.8
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 7.5e-156 554.7 490 58.4
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 7.8e-153 544.7 512 55.1
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 3.6e-150 535.8 514 52.7
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 1.2e-148 530.8 535 53.8
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 8.6e-144 514.6 542 50.2
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 5.2e-141 505.4 453 58.1
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.4e-138 497.3 512 51.4
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 4.3e-135 485.7 462 55.8
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 5.8e-124 448.7 470 48.9
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 2.3e-120 436.8 522 45.0
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 4.0e-117 426.0 342 64.3
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 2.5e-114 416.8 378 59.3
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 3.2e-114 416.4 391 54.5
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 2.5e-111 406.8 532 43.2
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.1e-101 374.8 387 55.3
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 1.3e-99 367.9 532 41.2
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 2.7e-97 360.1 465 47.7
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 3.7e-94 349.7 327 57.5
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 7.7e-92 342.0 388 48.5
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 2.4e-85 320.5 458 41.7
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 1.5e-82 311.2 263 61.6
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 5.2e-80 302.8 350 45.1
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 5.9e-76 289.3 322 49.7
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 1.1e-74 285.0 428 41.4
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 1.5e-71 274.6 196 68.4
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 9.1e-69 265.4 450 38.7
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 2.6e-63 247.3 137 91.2
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 1.4e-61 241.5 391 38.4
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 4.0e-56 223.4 542 31.2
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 7.0e-53 212.6 359 37.9
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.7e-52 210.7 186 59.1
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 7.5e-47 192.6 135 67.4
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.3e-43 181.0 124 70.2
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.3e-43 181.0 124 70.2
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 3.3e-34 150.6 508 30.1
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 2.7e-28 131.0 216 37.0
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 4.3e-26 123.6 60 93.3
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 9.3e-21 105.9 225 35.6
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 1.2e-20 105.5 115 45.2
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.1e-18 99.0 96 52.1
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 1.9e-18 98.2 77 57.1
C03p92170 Brassica napus HOM05D005843 ORTHO05D040940 2.5e-18 97.8 105 48.6
BolC3t21533H Brassica oleracea HOM05D005843 ORTHO05D040940 2.5e-18 97.8 105 48.6
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 2.5e-18 97.8 53 81.1
BraA10t45356Z Brassica rapa HOM05D005843 ORTHO05D007781 5.8e-15 86.7 67 59.7
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 9.3e-13 79.3 65 64.6
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 5.6e-10 70.1 55 54.5


User provided reference genes

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