Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014819 Daucus carota HOM05D003067 ORTHO05D009378 1.2e-152 543.1 266 100.0
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 2.0e-43 180.3 253 40.7
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 5.8e-43 178.7 233 42.9
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 2.2e-37 160.2 256 37.1
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 8.2e-37 158.3 241 34.9
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 6.9e-36 155.2 256 36.3
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 1.2e-35 154.5 253 37.5
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 1.5e-35 154.1 250 37.6
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 2.0e-35 153.7 260 36.2
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 2.0e-35 153.7 276 36.6
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 2.6e-35 153.3 256 34.8
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 1.0e-34 151.4 247 36.0
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 1.7e-34 150.6 253 36.0
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 2.2e-34 150.2 279 33.7
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 2.2e-34 150.2 253 36.0
CAN.G551.28 Capsicum annuum HOM05D003067 ORTHO05D009378 5.5e-33 145.6 256 33.6
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 2.1e-32 143.7 264 34.8
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 6.1e-32 142.1 263 33.5
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 6.1e-32 142.1 263 33.1
Sopen12g005120 Solanum pennellii HOM05D003067 ORTHO05D009378 6.1e-32 142.1 252 36.5
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 7.9e-32 141.7 238 36.6
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 1.0e-31 141.4 252 36.1
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 1.0e-31 141.4 265 33.6
Solyc12g010230.2 Solanum lycopersicum HOM05D003067 ORTHO05D009378 1.0e-31 141.4 252 34.9
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 1.4e-31 141.0 258 35.3
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 1.8e-31 140.6 257 34.6
SGA_v2.0_scaffold265G46124 Striga asiatica HOM05D003067 ORTHO05D009378 6.7e-31 138.7 247 33.6
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 1.1e-30 137.9 268 31.0
MSTRG.6118 Avicennia marina HOM05D003067 ORTHO05D009378 1.5e-30 137.5 254 33.1
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 1.5e-30 137.5 264 32.2
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 1.9e-30 137.1 263 32.7
Medtr2g450220 Medicago truncatula HOM05D003067 ORTHO05D009378 1.9e-30 137.1 261 34.5
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 2.5e-30 136.7 262 33.2
Potri.006G187500 Populus trichocarpa HOM05D003067 ORTHO05D009378 5.3e-28 129.0 258 32.9
CDE06G1077 Ceratophyllum demersum HOM05D003067 ORTHO05D009378 6.9e-28 128.6 263 28.9
Migut.J01329 Erythranthe guttata HOM05D003067 ORTHO05D009378 6.9e-28 128.6 251 34.3
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 1.2e-27 127.9 257 30.7
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 1.0e-26 124.8 244 32.8
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 2.2e-26 123.6 255 31.4
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 8.5e-26 121.7 263 31.9
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 1.9e-25 120.6 254 33.9
Peaxi162Scf00108g00714 Petunia axillaris HOM05D003067 ORTHO05D009378 3.2e-25 119.8 256 33.2
HanXRQChr05g0133261 Helianthus annuus HOM05D003067 ORTHO05D009378 2.7e-24 116.7 253 33.6
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 7.9e-24 115.2 214 33.6
THA.LOC104803568 Tarenaya hassleriana HOM05D003067 ORTHO05D009378 7.9e-24 115.2 264 31.4
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 1.0e-23 114.8 262 29.4
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 2.3e-23 113.6 261 34.1
HPP92_017493 Vanilla planifolia HOM05D003067 ORTHO05D009378 3.0e-23 113.2 256 31.6
MD02G1010100 Malus domestica HOM05D003067 ORTHO05D009378 8.8e-23 111.7 231 32.0
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 3.3e-22 109.8 256 34.0
COL.COLO4_18774 Corchorus olitorius HOM05D003067 ORTHO05D009378 4.4e-22 109.4 242 31.4
SalBow1G0452 Salvia bowleyana HOM05D003067 ORTHO05D009378 1.3e-21 107.8 232 31.0
Lj6g0006451 Lotus japonicus HOM05D003067 ORTHO05D009378 4.8e-21 105.9 254 29.9
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 8.2e-21 105.1 257 33.9
Nitab4.5_0002315g0060 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.4e-20 104.4 256 30.1
BcaC09g51887 Brassica carinata HOM05D003067 ORTHO05D009378 6.9e-20 102.1 260 31.2
C01p07950 Brassica napus HOM05D003067 ORTHO05D009378 9.1e-20 101.7 260 31.5
BolC1t00782H Brassica oleracea HOM05D003067 ORTHO05D009378 9.1e-20 101.7 260 31.5
AL7G21080 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 1.2e-19 101.3 264 31.8
BcaNung03423 Brassica carinata HOM05D003067 ORTHO05D009378 1.5e-19 100.9 265 31.7
A01p07190 Brassica napus HOM05D003067 ORTHO05D009378 2.6e-19 100.1 260 31.2
Oeu043496.1 Olea europaea HOM05D003067 ORTHO05D009378 5.9e-19 99.0 109 45.0
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 7.7e-19 98.6 257 29.6
Oeu043497.1 Olea europaea HOM05D003067 ORTHO05D009378 2.2e-18 97.1 109 44.0
BraA01t00670Z Brassica rapa HOM05D003067 ORTHO05D009378 3.8e-18 96.3 260 30.8
CsaV3_2G003640 Cucumis sativus L. HOM05D003067 ORTHO05D009378 5.0e-18 95.9 256 28.1
Glyma.15G205500 Glycine max HOM05D003067 ORTHO05D009378 1.9e-17 94.0 260 27.7
ClCG02G017140 Citrullus lanatus HOM05D003067 ORTHO05D009378 9.4e-17 91.7 270 28.5
FAN19G0469 Fragaria x ananassa HOM05D003067 ORTHO05D009378 1.6e-16 90.9 110 42.7
MELO3C004431.2 Cucumis melo HOM05D003067 ORTHO05D009378 2.7e-16 90.1 289 27.0
Sabra18G0093300 Salix brachista HOM05D003067 ORTHO05D009378 2.7e-16 90.1 323 25.1
AT4G30993 Arabidopsis thaliana HOM05D003067 ORTHO05D009378 4.7e-16 89.4 118 46.6
Lsat_1_v5_gn_8_59821 Lactuca sativa HOM05D003067 ORTHO05D009378 5.2e-15 85.9 251 26.7
SGA_v2.0_scaffold214G42289 Striga asiatica HOM05D003067 ORTHO05D009378 8.8e-15 85.1 253 24.9
Zm00001eb374750 Zea mays HOM05D003067 ORTHO05D009378 8.8e-15 85.1 252 27.8
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 4.8e-13 79.3 150 30.7
PGSC0003DMG400007894 Solanum tuberosum HOM05D003067 ORTHO05D009378 9.1e-12 75.1 139 34.5
vmacro06093 Vaccinium macrocarpon HOM05D003067 ORTHO05D009378 9.1e-12 75.1 231 28.1
Cpa.g.sc46.125 Carica papaya HOM05D003067 ORTHO05D009378 1.6e-11 74.3 71 46.5
CARHR238890 Cardamine hirsuta HOM05D003067 ORTHO05D009378 2.9e-10 70.1 108 41.7
Nitab4.5_0000525g0300 Nicotiana tabacum HOM05D003067 ORTHO05D009378 3.8e-10 69.7 232 27.2
SGA_v2.0_scaffold113G31772 Striga asiatica HOM05D003067 ORTHO05D009378 1.1e-09 68.2 208 25.5
Nitab4.5_0001478g0160 Nicotiana tabacum HOM05D003067 ORTHO05D009378 9.7e-06 55.1 148 27.0


User provided reference genes

Program Settings