Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014792 Daucus carota HOM05D005489 ORTHO05D006629 3.9e-81 304.7 148 100.0
Rhsim06G0109100 Rhododendron simsii HOM05D005489 ORTHO05D006629 3.5e-61 238.4 125 88.8
PSO017G5790 Papaver somniferum HOM05D005489 ORTHO05D006629 5.9e-61 237.7 131 85.5
PSO170G3859 Papaver somniferum HOM05D005489 ORTHO05D006629 5.9e-61 237.7 131 85.5
Aqoxy5G02479 Aquilegia oxysepala HOM05D005489 ORTHO05D006629 7.7e-61 237.3 131 84.0
HanXRQChr11g0326271 Helianthus annuus HOM05D005489 ORTHO05D006629 7.7e-61 237.3 131 86.3
CDE06G1809 Ceratophyllum demersum HOM05D005489 ORTHO05D006629 1.0e-60 236.9 131 84.7
Sc01g0001550 Simmondsia chinensis HOM05D005489 ORTHO05D006629 1.3e-60 236.5 125 88.0
Hma1.2p1_0221F.1_g093180 Hydrangea macrophylla HOM05D005489 ORTHO05D006629 2.2e-60 235.7 131 84.0
COL.COLO4_32811 Corchorus olitorius HOM05D005489 ORTHO05D006629 2.9e-60 235.3 131 83.2
Nitab4.5_0000051g0120 Nicotiana tabacum HOM05D005489 ORTHO05D006629 2.9e-60 235.3 125 88.0
Solyc11g013550.2 Solanum lycopersicum HOM05D005489 ORTHO05D006629 2.9e-60 235.3 131 84.0
PGSC0003DMG400027793 Solanum tuberosum HOM05D005489 ORTHO05D006629 2.9e-60 235.3 131 84.0
TAR628G1556 Trochodendron aralioides HOM05D005489 ORTHO05D006629 2.9e-60 235.3 134 82.1
Dinv26716 Davidia involucrata HOM05D005489 ORTHO05D006629 5.0e-60 234.6 131 82.4
Sopen11g008580 Solanum pennellii HOM05D005489 ORTHO05D006629 6.5e-60 234.2 131 83.2
CAN.G255.20 Capsicum annuum HOM05D005489 ORTHO05D006629 8.5e-60 233.8 131 83.2
Gohir.A01G187700 Gossypium hirsutum HOM05D005489 ORTHO05D006629 8.5e-60 233.8 131 82.4
Gorai.002G220400 Gossypium raimondii HOM05D005489 ORTHO05D006629 8.5e-60 233.8 128 83.6
Lsat_1_v5_gn_4_135561 Lactuca sativa HOM05D005489 ORTHO05D006629 8.5e-60 233.8 131 84.7
MBI06_g01046_MAGBIO Magnolia biondii HOM05D005489 ORTHO05D006629 8.5e-60 233.8 124 87.1
Thecc.08G116800 Theobroma cacao HOM05D005489 ORTHO05D006629 8.5e-60 233.8 131 81.7
TWI56G0906 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 8.5e-60 233.8 131 81.7
Gohir.A02G075000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.1e-59 233.4 134 79.1
Nn5g27958 Nelumbo nucifera HOM05D005489 ORTHO05D006629 1.1e-59 233.4 131 83.2
EL10Ac1g00039 Beta vulgaris HOM05D005489 ORTHO05D006629 1.5e-59 233.0 131 85.5
Hund16821 Selenicereus undatus HOM05D005489 ORTHO05D006629 1.5e-59 233.0 125 85.6
Gohir.A06G041000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.9e-59 232.6 131 81.7
Gohir.D02G082100 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.9e-59 232.6 134 79.1
Gohir.D06G041900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.9e-59 232.6 131 81.7
Gorai.010G047100 Gossypium raimondii HOM05D005489 ORTHO05D006629 1.9e-59 232.6 131 81.7
Nn1g08538 Nelumbo nucifera HOM05D005489 ORTHO05D006629 1.9e-59 232.6 131 81.7
HanXRQChr09g0260151 Helianthus annuus HOM05D005489 ORTHO05D006629 2.5e-59 232.3 131 84.0
Ciclev10002818m.g Citrus clementina HOM05D005489 ORTHO05D006629 3.2e-59 231.9 131 81.7
Peaxi162Scf01011g00023 Petunia axillaris HOM05D005489 ORTHO05D006629 5.5e-59 231.1 131 84.0
Dinv27383 Davidia involucrata HOM05D005489 ORTHO05D006629 7.2e-59 230.7 131 82.4
TAR197G0004 Trochodendron aralioides HOM05D005489 ORTHO05D006629 7.2e-59 230.7 131 81.7
Atru.chr13.1318 Acer truncatum HOM05D005489 ORTHO05D006629 9.4e-59 230.3 131 80.2
Atru.chr13.1362 Acer truncatum HOM05D005489 ORTHO05D006629 9.4e-59 230.3 131 80.2
GSVIVG01008943001 Vitis vinifera HOM05D005489 ORTHO05D006629 1.2e-58 229.9 131 80.9
PGR044G1289 Punica granatum HOM05D005489 ORTHO05D006629 2.7e-58 228.8 131 80.2
THA.LOC104813132 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 2.7e-58 228.8 131 80.2
MELO3C022783.2 Cucumis melo HOM05D005489 ORTHO05D006629 3.6e-58 228.4 131 79.4
Manes.18G073000 Manihot esculenta HOM05D005489 ORTHO05D006629 3.6e-58 228.4 131 79.4
Sed0015736 Sechium edule HOM05D005489 ORTHO05D006629 3.6e-58 228.4 131 79.4
QL12p035283 Quercus lobata HOM05D005489 ORTHO05D006629 4.7e-58 228.0 131 80.2
THA.LOC104806808 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 4.7e-58 228.0 131 79.4
Duzib041G0073 Durio zibethinus HOM05D005489 ORTHO05D006629 6.1e-58 227.6 134 77.6
TWI12G0464 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 6.1e-58 227.6 131 78.6
RcHm_v2.0_Chr7g0240921 Rosa chinensis HOM05D005489 ORTHO05D006629 1.0e-57 226.9 131 79.4
SGA_v2.0_scaffold24G10504 Striga asiatica HOM05D005489 ORTHO05D006629 1.0e-57 226.9 124 84.7
Aa31LG6G9070 Aethionema arabicum HOM05D005489 ORTHO05D006629 1.4e-57 226.5 125 80.8
CiPaw.05G228700 Carya illinoinensis HOM05D005489 ORTHO05D006629 1.4e-57 226.5 131 79.4
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 1.4e-57 226.5 131 80.9
MD15G1359200 Malus domestica HOM05D005489 ORTHO05D006629 1.4e-57 226.5 131 80.2
BcaB03g13640 Brassica carinata HOM05D005489 ORTHO05D006629 1.8e-57 226.1 131 77.9
A05p23180 Brassica napus HOM05D005489 ORTHO05D006629 1.8e-57 226.1 131 77.9
C05p36630 Brassica napus HOM05D005489 ORTHO05D006629 1.8e-57 226.1 131 77.9
BraA05t21185Z Brassica rapa HOM05D005489 ORTHO05D006629 1.8e-57 226.1 131 77.9
SalBow1G3581 Salvia bowleyana HOM05D005489 ORTHO05D006629 1.8e-57 226.1 124 84.7
Gohir.D01G181900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 2.3e-57 225.7 128 82.0
CARHR034780 Cardamine hirsuta HOM05D005489 ORTHO05D006629 3.0e-57 225.3 131 77.1
Nitab4.5_0002332g0020 Nicotiana tabacum HOM05D005489 ORTHO05D006629 3.0e-57 225.3 119 87.4
Sabra02G0070300 Salix brachista HOM05D005489 ORTHO05D006629 3.0e-57 225.3 131 78.6
Sp1g31180 Schrenkiella parvula HOM05D005489 ORTHO05D006629 3.0e-57 225.3 131 77.9
AL1G51120 Arabidopsis lyrata HOM05D005489 ORTHO05D006629 4.0e-57 224.9 131 77.1
AT1G36980 Arabidopsis thaliana HOM05D005489 ORTHO05D006629 4.0e-57 224.9 131 77.1
Carub.0001s3388 Capsella rubella HOM05D005489 ORTHO05D006629 4.0e-57 224.9 131 77.9
Thhalv10005115m.g Eutrema salsugineum HOM05D005489 ORTHO05D006629 4.0e-57 224.9 131 77.1
FvH4_5g38950 Fragaria vesca HOM05D005489 ORTHO05D006629 4.0e-57 224.9 131 79.4
FAN04G1587 Fragaria x ananassa HOM05D005489 ORTHO05D006629 4.0e-57 224.9 131 79.4
FAN08G2064 Fragaria x ananassa HOM05D005489 ORTHO05D006629 4.0e-57 224.9 131 79.4
FAN18G3455 Fragaria x ananassa HOM05D005489 ORTHO05D006629 4.0e-57 224.9 131 79.4
ECA232G0625 Erigeron canadensis HOM05D005489 ORTHO05D006629 5.2e-57 224.6 127 85.0
Duzib093G1687 Durio zibethinus HOM05D005489 ORTHO05D006629 6.7e-57 224.2 131 79.4
SGA_v2.0_scaffold118G32436 Striga asiatica HOM05D005489 ORTHO05D006629 6.7e-57 224.2 124 83.1
Potri.005G171901 Populus trichocarpa HOM05D005489 ORTHO05D006629 8.8e-57 223.8 134 76.1
Potri.002G089300 Populus trichocarpa HOM05D005489 ORTHO05D006629 2.0e-56 222.6 131 77.1
Glyma.04G253700 Glycine max HOM05D005489 ORTHO05D006629 2.6e-56 222.2 124 82.3
Oeu032962.1 Olea europaea HOM05D005489 ORTHO05D006629 2.6e-56 222.2 131 80.2
MSTRG.1486 Avicennia marina HOM05D005489 ORTHO05D006629 4.4e-56 221.5 124 81.5
Glyma.06G108600 Glycine max HOM05D005489 ORTHO05D006629 5.7e-56 221.1 131 77.9
arahy.Tifrunner.gnm1.ann1.204R5H Arachis hypogaea HOM05D005489 ORTHO05D006629 9.7e-56 220.3 131 76.3
arahy.Tifrunner.gnm1.ann1.64ZY3M Arachis hypogaea HOM05D005489 ORTHO05D006629 9.7e-56 220.3 131 76.3
Ca_25761_v3 Cicer arietinum L. HOM05D005489 ORTHO05D006629 9.7e-56 220.3 131 77.1
Cc10_g10440 Coffea canephora HOM05D005489 ORTHO05D006629 1.3e-55 219.9 125 83.2
Medtr3g073300 Medicago truncatula HOM05D005489 ORTHO05D006629 1.3e-55 219.9 131 77.1
Prupe.1G506000 Prunus persica HOM05D005489 ORTHO05D006629 1.3e-55 219.9 131 77.9
TPR.G32948 Trifolium pratense HOM05D005489 ORTHO05D006629 1.7e-55 219.5 131 76.3
Psat5g135600 Pisum sativum HOM05D005489 ORTHO05D006629 3.7e-55 218.4 131 76.3
Migut.C01190 Erythranthe guttata HOM05D005489 ORTHO05D006629 6.3e-55 217.6 124 77.4
VMungo1127G1458 Vigna mungo HOM05D005489 ORTHO05D006629 8.2e-55 217.2 131 75.6
Phvul.011G165300 Phaseolus vulgaris HOM05D005489 ORTHO05D006629 1.1e-54 216.9 131 75.6
Lalb_Chr08g0241711 Lupinus albus HOM05D005489 ORTHO05D006629 1.4e-54 216.5 131 74.8
Lalb_Chr11g0065701 Lupinus albus HOM05D005489 ORTHO05D006629 1.4e-54 216.5 131 74.8
Oeu043793.1 Olea europaea HOM05D005489 ORTHO05D006629 1.4e-54 216.5 133 75.9
Lj1g0000272 Lotus japonicus HOM05D005489 ORTHO05D006629 4.1e-54 214.9 131 76.3
Migut.N03320 Erythranthe guttata HOM05D005489 ORTHO05D006629 2.7e-53 212.2 124 80.6
Zm00001eb244520 Zea mays HOM05D005489 ORTHO05D006629 7.2e-51 204.1 131 71.0
HPP92_002297 Vanilla planifolia HOM05D005489 ORTHO05D006629 2.1e-50 202.6 132 72.0
Os02g0566900 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 4.7e-50 201.4 132 70.5
Actinidia29431 Actinidia chinensis HOM05D005489 ORTHO05D006629 6.1e-50 201.1 124 75.8
BolC5t32398H Brassica oleracea HOM05D005489 ORTHO05D006629 2.3e-49 199.1 120 75.8
HPP92_005944 Vanilla planifolia HOM05D005489 ORTHO05D006629 3.0e-49 198.7 132 70.5
BcaC05g27681 Brassica carinata HOM05D005489 ORTHO05D006629 5.2e-49 198.0 120 75.0
Zm00001eb100550 Zea mays HOM05D005489 ORTHO05D006629 6.8e-49 197.6 133 71.4
AagrBONN_evm.TU.Sc2ySwM_344.2049 Anthoceros agrestis HOM05D005489 ORTHO05D006629 5.7e-48 194.5 128 71.1
Os09g0453000 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 5.7e-48 194.5 133 70.7
unitig_747.g21477 Utricularia gibba HOM05D003597 ORTHO05D004420 3.7e-47 191.8 194 53.1
SEGI_34511 Sequoiadendron giganteum HOM05D005489 ORTHO05D006629 2.4e-46 189.1 124 75.0
SMO116G0262 Selaginella moellendorffii HOM05D005489 ORTHO05D006629 1.3e-44 183.3 121 71.1
Pp3c2_28270 Physcomitrium patens HOM05D005489 ORTHO05D006629 4.7e-42 174.9 125 68.0
Pp3c1_10200 Physcomitrium patens HOM05D005489 ORTHO05D006629 8.0e-42 174.1 133 63.9
Mapoly0004s0020 Marchantia polymorpha HOM05D005489 ORTHO05D006629 1.4e-41 173.3 142 62.7
CBR_g30829 Chara braunii HOM05D005489 ORTHO05D006629 4.4e-40 168.3 119 65.5
Sabra05G0129400 Salix brachista HOM05D005489 ORTHO05D006629 1.2e-37 160.2 124 65.3
DCAR_023128 Daucus carota HOM05D005489 ORTHO05D006629 2.0e-37 159.5 75 96.0
Gorai.005G092000 Gossypium raimondii HOM05D005489 ORTHO05D006629 9.5e-35 150.6 90 77.8
TAR127G0005 Trochodendron aralioides HOM05D005489 ORTHO05D006629 1.6e-34 149.8 75 89.3
Haze_00523 Corylus avellana HOM05D005489 ORTHO05D006629 2.1e-34 149.4 76 85.5
ATR0121G008 Amborella trichopoda HOM05D005489 ORTHO05D006629 2.8e-34 149.1 74 90.5
CANSAT25G2554 Cannabis sativa HOM05D005489 ORTHO05D006629 2.8e-34 149.1 92 72.8
ClCG03G009110 Citrullus lanatus HOM05D005489 ORTHO05D006629 3.6e-34 148.7 74 86.5
CsaV3_5G023520 Cucumis sativus L. HOM05D005489 ORTHO05D006629 3.6e-34 148.7 74 86.5
Cfa015959 Carpinus fangiana HOM05D005489 ORTHO05D006629 1.0e-33 147.1 132 58.3
BcaC05g27682 Brassica carinata HOM05D005489 ORTHO05D006629 1.2e-32 143.7 74 82.4
C05p36640 Brassica napus HOM05D005489 ORTHO05D006629 1.2e-32 143.7 74 82.4
Nn2g15248 Nelumbo nucifera HOM05D005489 ORTHO05D006629 1.6e-29 133.3 73 78.1
Oeu050268.1 Olea europaea HOM05D005489 ORTHO05D006629 4.3e-27 125.2 76 76.3
AUR62004694 Chenopodium quinoa HOM05D005489 ORTHO05D006629 4.7e-26 121.7 139 51.1
Cre01.g042950 Chlamydomonas reinhardtii HOM05D005489 ORTHO05D006629 2.0e-24 116.3 125 44.8
Sopen11g008620 Solanum pennellii HOM05D000147 ORTHO05D004360 2.3e-17 92.8 68 69.1
Eucgr.F04378 Eucalyptus grandis HOM05D005489 ORTHO05D006629 1.3e-15 87.0 47 78.7
ClCG03G009140 Citrullus lanatus HOM05D005489 ORTHO05D006629 2.2e-15 86.3 67 64.2
PRCOL_00003843 Prasinoderma coloniale HOM05D005489 ORTHO05D006629 2.9e-15 85.9 110 44.5
SalBow7G4082 Salvia bowleyana HOM05D005489 ORTHO05D006629 1.3e-12 77.0 156 38.5
Solyc11g013660.1 Solanum lycopersicum HOM05D005489 ORTHO05D006629 1.3e-12 77.0 70 60.0
Cre03.g159300 Chlamydomonas reinhardtii HOM05D005489 ORTHO05D006629 1.2e-10 70.5 119 33.6
Os08g0469200 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 3.6e-10 68.9 74 51.4
SalBow7G1125 Salvia bowleyana HOM05D002998 ORTHO05D006629 5.2e-09 65.1 35 74.3


User provided reference genes

Program Settings