Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 2.0e-109 399.1 193 100.0
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 3.7e-39 165.6 210 50.0
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 1.1e-19 100.9 197 37.6
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 2.5e-19 99.8 200 38.0
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 3.3e-19 99.4 184 37.0
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 5.6e-19 98.6 200 37.5
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 9.5e-19 97.8 175 38.3
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 6.2e-18 95.1 188 37.2
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 2.3e-17 93.2 178 38.8
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 2.3e-17 93.2 178 38.8
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 3.1e-17 92.8 167 38.3
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 4.0e-17 92.4 171 39.2
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 5.2e-17 92.0 171 39.8
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 1.2e-16 90.9 186 37.6
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 1.5e-16 90.5 203 36.0
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 2.0e-16 90.1 206 35.9
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 2.6e-16 89.7 171 38.6
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.6e-16 89.7 174 37.9
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.6e-16 89.7 171 38.6
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 2.6e-16 89.7 184 38.0
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 3.4e-16 89.4 186 36.0
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 3.4e-16 89.4 186 36.0
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 3.4e-16 89.4 187 34.8
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 5.8e-16 88.6 173 34.7
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 5.8e-16 88.6 168 38.1
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 5.8e-16 88.6 188 35.6
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 7.5e-16 88.2 197 35.5
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 9.8e-16 87.8 194 34.0
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 1.3e-15 87.4 163 36.8
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 2.2e-15 86.7 161 41.6
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 2.2e-15 86.7 147 38.1
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 3.7e-15 85.9 172 36.0
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 4.9e-15 85.5 174 34.5
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 4.9e-15 85.5 187 35.8
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 6.4e-15 85.1 172 33.7
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 8.3e-15 84.7 175 33.7
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 1.1e-14 84.3 199 32.2
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 1.4e-14 84.0 181 37.0
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 2.4e-14 83.2 192 35.9
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 3.2e-14 82.8 191 35.6
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 4.1e-14 82.4 178 35.4
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 5.4e-14 82.0 195 33.8
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 7.1e-14 81.6 199 33.7
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 9.2e-14 81.3 167 35.3
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 1.2e-13 80.9 183 33.3
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 1.2e-13 80.9 201 32.8
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 3.5e-13 79.3 178 33.1
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 1.0e-12 77.8 201 33.3
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 1.0e-12 77.8 178 32.6
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 1.0e-12 77.8 187 35.3
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.0e-12 77.8 167 32.9
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 1.3e-12 77.4 203 34.0
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 2.3e-12 76.6 223 34.1
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 3.0e-12 76.3 177 33.3
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 3.0e-12 76.3 187 32.1
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 3.0e-12 76.3 176 31.2
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 3.9e-12 75.9 180 30.6
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 3.9e-12 75.9 180 30.6
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 3.9e-12 75.9 192 33.9
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 3.9e-12 75.9 177 34.5
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 8.6e-12 74.7 231 27.3
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.9e-11 73.6 185 35.1
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 1.9e-11 73.6 157 33.1
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 2.5e-11 73.2 182 35.7
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 3.3e-11 72.8 178 33.7
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 3.3e-11 72.8 187 34.8
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 3.3e-11 72.8 187 34.2
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 4.3e-11 72.4 163 32.5
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 4.3e-11 72.4 185 30.8
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 4.3e-11 72.4 147 33.3
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 5.6e-11 72.0 194 33.0
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 5.6e-11 72.0 148 35.8
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 5.6e-11 72.0 169 32.5
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 7.3e-11 71.6 174 33.3
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 9.5e-11 71.2 153 32.7
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 9.5e-11 71.2 192 32.8
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 1.2e-10 70.9 221 29.9
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 1.2e-10 70.9 182 34.6
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 1.6e-10 70.5 187 30.5
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 2.1e-10 70.1 186 34.4
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 3.6e-10 69.3 236 28.0
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 3.6e-10 69.3 137 34.3
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 3.6e-10 69.3 179 34.1
Lsat_1_v5_gn_1_25160 Lactuca sativa HOM05D007182 ORTHO05D008919 6.2e-10 68.6 205 29.3
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 6.2e-10 68.6 190 34.7
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 6.2e-10 68.6 184 33.7
ECA247G3744 Erigeron canadensis HOM05D007182 ORTHO05D008919 8.1e-10 68.2 170 32.4
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 1.4e-09 67.4 185 30.3
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 2.3e-09 66.6 212 30.7
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.3e-09 66.6 178 33.7
HanXRQChr02g0037031 Helianthus annuus HOM05D007182 ORTHO05D008919 3.1e-09 66.2 200 34.0
DCAR_031230 Daucus carota HOM05D007182 ORTHO05D008919 5.2e-09 65.5 194 30.9
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 1.2e-08 64.3 174 31.0
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 2.0e-08 63.5 131 32.8
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 3.4e-08 62.8 183 30.1
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 3.4e-08 62.8 183 30.1
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 5.8e-08 62.0 184 29.3
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.7e-07 60.5 144 32.6
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 3.7e-07 59.3 152 33.6
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 4.9e-07 58.9 165 30.3
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 6.4e-07 58.5 182 31.9
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 8.4e-07 58.2 179 28.5
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 2.4e-06 56.6 112 35.7
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 4.1e-06 55.8 88 36.4
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 5.4e-06 55.5 193 25.9


User provided reference genes

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