Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014760 Daucus carota HOM05D000016 ORTHO05D000109 4.6e-39 164.1 82 100.0
DCAR_014762 Daucus carota HOM05D000016 ORTHO05D000109 4.0e-19 97.8 69 69.6
DCAR_014761 Daucus carota HOM05D000016 ORTHO05D000109 4.9e-17 90.9 69 65.2
DCAR_019024 Daucus carota HOM05D000016 ORTHO05D000109 6.0e-15 84.0 67 59.7
DCAR_019025 Daucus carota HOM05D000016 ORTHO05D000109 1.0e-14 83.2 70 58.6
DCAR_019023 Daucus carota HOM05D000016 ORTHO05D000109 1.8e-14 82.4 70 58.6
DCAR_019017 Daucus carota HOM05D000016 ORTHO05D000109 3.0e-14 81.6 70 55.7
DCAR_014759 Daucus carota HOM05D000016 ORTHO05D000109 1.5e-13 79.3 70 54.3
DCAR_019021 Daucus carota HOM05D000016 ORTHO05D000109 7.4e-13 77.0 70 51.4
DCAR_014757 Daucus carota HOM05D000016 ORTHO05D000109 6.9e-11 70.5 66 54.5
DCAR_014758 Daucus carota HOM05D000016 ORTHO05D000109 2.6e-10 68.6 69 49.3
Gohir.A08G175800 Gossypium hirsutum HOM05D000016 ORTHO05D000109 2.5e-08 62.0 73 43.8
Rhsim08G0106000 Rhododendron simsii HOM05D000016 ORTHO05D000109 5.5e-08 60.8 80 41.2
DCAR_010933 Daucus carota HOM05D000016 ORTHO05D000109 7.1e-08 60.5 72 44.4
Ciclev10019651m.g Citrus clementina HOM05D000016 ORTHO05D000109 1.6e-07 59.3 72 38.9
Ciclev10030448m.g Citrus clementina HOM05D000016 ORTHO05D000109 1.6e-07 59.3 72 38.9
Medtr1g103670 Medicago truncatula HOM05D000016 ORTHO05D000109 1.6e-07 59.3 77 40.3
Rhsim08G0107900 Rhododendron simsii HOM05D000016 ORTHO05D000109 2.1e-07 58.9 69 43.5
CSS0012856 Camellia sinensis var. sinensis HOM05D000016 ORTHO05D000109 2.7e-07 58.5 72 44.4
Haze_09005 Corylus avellana HOM05D000016 ORTHO05D000109 2.7e-07 58.5 72 44.4
Medtr1g103680 Medicago truncatula HOM05D000016 ORTHO05D000109 2.7e-07 58.5 77 37.7
Hma1.2p1_2274F.1_g318590 Hydrangea macrophylla HOM05D000016 ORTHO05D000109 3.5e-07 58.2 72 43.1
Peaxi162Scf00137g00152 Petunia axillaris HOM05D000016 ORTHO05D000109 3.5e-07 58.2 71 40.8
TPR.G35074 Trifolium pratense HOM05D000016 ORTHO05D000109 3.5e-07 58.2 77 40.3
CSS0018419 Camellia sinensis var. sinensis HOM05D000016 ORTHO05D000109 4.6e-07 57.8 72 44.4
Gohir.D08G194600 Gossypium hirsutum HOM05D000016 ORTHO05D000109 6.1e-07 57.4 73 42.5
Gorai.004G205000 Gossypium raimondii HOM05D000016 ORTHO05D000109 6.1e-07 57.4 73 42.5
Peaxi162Scf00183g00067 Petunia axillaris HOM05D000016 ORTHO05D000109 1.0e-06 56.6 71 42.3
TPR.G5497 Trifolium pratense HOM05D000016 ORTHO05D000109 1.0e-06 56.6 77 39.0
Hma1.2p1_2135F.1_g314870 Hydrangea macrophylla HOM05D000016 ORTHO05D000109 1.3e-06 56.2 72 43.1
Hma1.2p1_2513F.1_g323660 Hydrangea macrophylla HOM05D000016 ORTHO05D000109 1.3e-06 56.2 72 43.1
AUR62019732 Chenopodium quinoa HOM05D000016 ORTHO05D000109 1.8e-06 55.8 72 41.7
Atru.chr5.345 Acer truncatum HOM05D000016 ORTHO05D000109 2.3e-06 55.5 72 38.9
Duzib205G1641 Durio zibethinus HOM05D000016 ORTHO05D000109 2.3e-06 55.5 71 39.4
Gohir.D09G188300 Gossypium hirsutum HOM05D000016 ORTHO05D000109 2.3e-06 55.5 71 40.8
Psat6g207280 Pisum sativum HOM05D000016 ORTHO05D000109 2.3e-06 55.5 77 37.7
GSVIVG01027555001 Vitis vinifera HOM05D000016 ORTHO05D000109 2.3e-06 55.5 72 38.9
Peaxi162Scf00286g00646 Petunia axillaris HOM05D000016 ORTHO05D000109 3.0e-06 55.1 71 43.7
RcHm_v2.0_Chr4g0431751 Rosa chinensis HOM05D000016 ORTHO05D000109 3.0e-06 55.1 72 40.3
Solyc02g065230.3 Solanum lycopersicum HOM05D000016 ORTHO05D000109 3.0e-06 55.1 70 38.6
Sopen02g015370 Solanum pennellii HOM05D000016 ORTHO05D000109 3.0e-06 55.1 70 38.6
TPR.G5542 Trifolium pratense HOM05D000016 ORTHO05D000109 3.0e-06 55.1 77 37.7
CSS0017707 Camellia sinensis var. sinensis HOM05D000016 ORTHO05D000109 3.9e-06 54.7 69 42.0
Gorai.006G211000 Gossypium raimondii HOM05D000016 ORTHO05D000109 3.9e-06 54.7 71 40.8
CSS0038003 Camellia sinensis var. sinensis HOM05D000016 ORTHO05D000109 5.1e-06 54.3 69 42.0
COL.COLO4_09010 Corchorus olitorius HOM05D000016 ORTHO05D000109 5.1e-06 54.3 71 33.8
Haze_09006 Corylus avellana HOM05D000016 ORTHO05D000109 5.1e-06 54.3 71 39.4
Gorai.004G205400 Gossypium raimondii HOM05D000016 ORTHO05D000109 5.1e-06 54.3 71 40.8
Nitab4.5_0005371g0020 Nicotiana tabacum HOM05D000016 ORTHO05D000109 5.1e-06 54.3 72 41.7
Atru.chr3.2801 Acer truncatum HOM05D000016 ORTHO05D000109 6.7e-06 53.9 72 38.9
Ca_10893_v3 Cicer arietinum L. HOM05D000016 ORTHO05D000109 6.7e-06 53.9 80 38.8
Ca_30332_v3 Cicer arietinum L. HOM05D000016 ORTHO05D000109 6.7e-06 53.9 80 38.8
Hund06498 Selenicereus undatus HOM05D000016 ORTHO05D000109 6.7e-06 53.9 69 43.5
PGSC0003DMG400046106 Solanum tuberosum HOM05D000016 ORTHO05D000109 6.7e-06 53.9 72 38.9
TWI15G0364 Tripterygium wilfordii HOM05D000016 ORTHO05D000109 6.7e-06 53.9 71 38.0
unitig_32.g11687 Utricularia gibba HOM05D000016 ORTHO05D000109 6.7e-06 53.9 78 43.6
Atru.chr5.340 Acer truncatum HOM05D000016 ORTHO05D000109 8.7e-06 53.5 72 37.5
Atru.chr5.343 Acer truncatum HOM05D000016 ORTHO05D000109 8.7e-06 53.5 72 37.5
Ca_10894_v3 Cicer arietinum L. HOM05D000016 ORTHO05D000109 8.7e-06 53.5 77 35.1
Ca_30331_v3 Cicer arietinum L. HOM05D000016 ORTHO05D000109 8.7e-06 53.5 77 35.1
COL.COLO4_23817 Corchorus olitorius HOM05D000016 ORTHO05D000109 8.7e-06 53.5 71 40.8
Glyma.20G148000 Glycine max HOM05D000016 ORTHO05D000109 8.7e-06 53.5 77 35.1
Lj7C40T0 Lonicera japonica HOM05D000016 ORTHO05D000109 8.7e-06 53.5 71 39.4


User provided reference genes

Program Settings