Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014742 Daucus carota HOM05D006682 ORTHO05D008627 6.9e-96 354.0 181 100.0
FAN11G1823 Fragaria x ananassa HOM05D006682 ORTHO05D008627 3.1e-72 275.4 176 80.1
RcHm_v2.0_Chr5g0077121 Rosa chinensis HOM05D006682 ORTHO05D008627 3.1e-72 275.4 176 79.5
FvH4_3g43060 Fragaria vesca HOM05D006682 ORTHO05D008627 4.1e-72 275.0 176 80.1
FAN25G2895 Fragaria x ananassa HOM05D006682 ORTHO05D008627 4.1e-72 275.0 176 80.1
Lj1A355T5 Lonicera japonica HOM05D006682 ORTHO05D008627 5.3e-72 274.6 177 76.8
FAN21G3201 Fragaria x ananassa HOM05D006682 ORTHO05D008627 9.1e-72 273.9 176 79.5
FAN16G2773 Fragaria x ananassa HOM05D006682 ORTHO05D008627 1.2e-71 273.5 176 79.0
arahy.Tifrunner.gnm1.ann1.1N3H6Z Arachis hypogaea HOM05D006682 ORTHO05D008627 2.0e-71 272.7 176 78.4
COL.COLO4_14494 Corchorus olitorius HOM05D006682 ORTHO05D008627 2.0e-71 272.7 176 77.3
arahy.Tifrunner.gnm1.ann1.11YZMF Arachis hypogaea HOM05D006682 ORTHO05D008627 2.9e-70 268.9 176 77.8
Prupe.6G023600 Prunus persica HOM05D006682 ORTHO05D008627 2.9e-70 268.9 164 79.9
MD11G1029300 Malus domestica HOM05D006682 ORTHO05D008627 8.5e-70 267.3 166 79.5
Cpa.g.sc21.74 Carica papaya HOM05D006682 ORTHO05D008627 1.1e-69 266.9 175 77.1
Ciclev10012386m.g Citrus clementina HOM05D006682 ORTHO05D008627 2.5e-69 265.8 173 75.7
Dinv36276 Davidia involucrata HOM05D006682 ORTHO05D008627 2.5e-69 265.8 167 79.6
A09p44960 Brassica napus HOM05D006682 ORTHO05D008627 3.2e-69 265.4 181 74.6
BraA09t39955Z Brassica rapa HOM05D006682 ORTHO05D008627 3.2e-69 265.4 181 74.6
Gohir.A01G228400 Gossypium hirsutum HOM05D006682 ORTHO05D008627 3.2e-69 265.4 176 73.9
CiPaw.13G163300 Carya illinoinensis HOM05D006682 ORTHO05D008627 4.2e-69 265.0 166 78.3
Eucgr.B03679 Eucalyptus grandis HOM05D006682 ORTHO05D008627 4.2e-69 265.0 164 79.9
Cpa.g.sc12.111 Carica papaya HOM05D006682 ORTHO05D008627 5.5e-69 264.6 175 77.1
Gohir.D01G218300 Gossypium hirsutum HOM05D006682 ORTHO05D008627 5.5e-69 264.6 173 74.6
Gorai.002G265000 Gossypium raimondii HOM05D006682 ORTHO05D008627 5.5e-69 264.6 173 74.6
MD03G1024200 Malus domestica HOM05D006682 ORTHO05D008627 5.5e-69 264.6 173 76.3
CSS0008647 Camellia sinensis var. sinensis HOM05D006682 ORTHO05D008627 7.2e-69 264.2 175 77.7
Manes.06G166600 Manihot esculenta HOM05D006682 ORTHO05D008627 7.2e-69 264.2 175 77.7
Sp5g10480 Schrenkiella parvula HOM05D006682 ORTHO05D008627 7.2e-69 264.2 181 74.0
AL5G32250 Arabidopsis lyrata HOM05D006682 ORTHO05D008627 9.4e-69 263.8 181 72.9
BcaB01g00416 Brassica carinata HOM05D006682 ORTHO05D008627 1.2e-68 263.5 171 75.4
PGR102G2323 Punica granatum HOM05D006682 ORTHO05D008627 1.6e-68 263.1 177 76.3
Thecc.05G010600 Theobroma cacao HOM05D006682 ORTHO05D008627 1.6e-68 263.1 173 75.7
BcaB01g00476 Brassica carinata HOM05D006682 ORTHO05D008627 2.1e-68 262.7 181 74.0
C08p27040 Brassica napus HOM05D006682 ORTHO05D008627 2.1e-68 262.7 181 74.0
BolC8t50319H Brassica oleracea HOM05D006682 ORTHO05D008627 2.1e-68 262.7 181 74.0
Sc16g0009700 Simmondsia chinensis HOM05D006682 ORTHO05D008627 2.7e-68 262.3 182 75.3
Haze_23101 Corylus avellana HOM05D006682 ORTHO05D008627 3.6e-68 261.9 169 77.5
Duzib128G1702 Durio zibethinus HOM05D006682 ORTHO05D008627 4.7e-68 261.5 173 75.1
Aa31sc655G20 Aethionema arabicum HOM05D006682 ORTHO05D008627 6.1e-68 261.2 170 75.3
AT3G51790 Arabidopsis thaliana HOM05D006682 ORTHO05D008627 8.0e-68 260.8 175 74.3
Thhalv10010653m.g Eutrema salsugineum HOM05D006682 ORTHO05D008627 8.0e-68 260.8 181 72.9
THA.LOC104807019 Tarenaya hassleriana HOM05D006682 ORTHO05D008627 8.0e-68 260.8 181 72.4
CARHR161420 Cardamine hirsuta HOM05D006682 ORTHO05D008627 1.0e-67 260.4 178 74.7
EL10Ac3g05849 Beta vulgaris HOM05D006682 ORTHO05D008627 3.0e-67 258.8 179 72.6
Cfa009742 Carpinus fangiana HOM05D006682 ORTHO05D008627 3.9e-67 258.5 169 76.9
ClCG03G013350 Citrullus lanatus HOM05D006682 ORTHO05D008627 6.7e-67 257.7 166 78.3
Lsat_1_v5_gn_8_74980 Lactuca sativa HOM05D006682 ORTHO05D008627 8.8e-67 257.3 178 71.3
ECA233G5908 Erigeron canadensis HOM05D006682 ORTHO05D008627 1.5e-66 256.5 169 74.0
TWI38G0692 Tripterygium wilfordii HOM05D006682 ORTHO05D008627 2.6e-66 255.8 177 72.9
Rhsim13G0223700 Rhododendron simsii HOM05D006682 ORTHO05D008627 5.7e-66 254.6 168 75.6
Nn3g18894 Nelumbo nucifera HOM05D006682 ORTHO05D008627 7.4e-66 254.2 172 75.0
Ah.13g066750 Amaranthus hybridus HOM05D006682 ORTHO05D008627 1.3e-65 253.4 181 71.3
Hma1.2p1_0401F.1_g144700 Hydrangea macrophylla HOM05D006682 ORTHO05D008627 1.3e-65 253.4 163 79.1
Lalb_Chr08g0245621 Lupinus albus HOM05D006682 ORTHO05D008627 1.3e-65 253.4 176 72.7
Glyma.11G132200 Glycine max HOM05D006682 ORTHO05D008627 1.7e-65 253.1 180 70.6
Glyma.12G056800 Glycine max HOM05D006682 ORTHO05D008627 1.7e-65 253.1 180 70.6
QL01p005270 Quercus lobata HOM05D006682 ORTHO05D008627 1.7e-65 253.1 163 77.3
CANSAT80G0450 Cannabis sativa HOM05D006682 ORTHO05D008627 2.2e-65 252.7 177 72.3
MSTRG.18416 Avicennia marina HOM05D006682 ORTHO05D008627 2.8e-65 252.3 186 71.0
Aqoxy2G00055 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 2.4e-64 249.2 176 72.2
CsaV3_1G042700 Cucumis sativus L. HOM05D006682 ORTHO05D008627 2.4e-64 249.2 166 74.7
SalBow5G1085 Salvia bowleyana HOM05D006682 ORTHO05D008627 2.4e-64 249.2 190 68.9
SalBow8G0417 Salvia bowleyana HOM05D006682 ORTHO05D008627 3.1e-64 248.8 180 70.6
Sed0028089 Sechium edule HOM05D006682 ORTHO05D008627 4.1e-64 248.4 166 73.5
Migut.O00578 Erythranthe guttata HOM05D006682 ORTHO05D008627 7.0e-64 247.7 180 70.6
Lj3g0017048 Lotus japonicus HOM05D006682 ORTHO05D008627 9.1e-64 247.3 177 69.5
MELO3C015204.2 Cucumis melo HOM05D006682 ORTHO05D008627 1.2e-63 246.9 166 73.5
Nitab4.5_0002026g0020 Nicotiana tabacum HOM05D006682 ORTHO05D008627 1.2e-63 246.9 180 68.9
TAR623G0191 Trochodendron aralioides HOM05D006682 ORTHO05D008627 1.6e-63 246.5 175 73.1
TAR623G0396 Trochodendron aralioides HOM05D006682 ORTHO05D008627 1.6e-63 246.5 175 73.1
Cc00_g20370 Coffea canephora HOM05D006682 ORTHO05D008627 2.0e-63 246.1 181 69.1
VMungo1127G1130 Vigna mungo HOM05D006682 ORTHO05D008627 3.5e-63 245.4 168 72.0
CDE03G0115 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 4.5e-63 245.0 174 67.2
Phvul.011G058400 Phaseolus vulgaris HOM05D006682 ORTHO05D008627 4.5e-63 245.0 177 71.2
Lj3P268T21 Lonicera japonica HOM05D006682 ORTHO05D008627 7.7e-63 244.2 164 76.2
CDE04G1557 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 1.7e-62 243.0 172 68.0
PGSC0003DMG400023913 Solanum tuberosum HOM05D006682 ORTHO05D008627 1.7e-62 243.0 179 68.7
Manes.14G001136 Manihot esculenta HOM05D006682 ORTHO05D008627 2.9e-62 242.3 172 73.3
Medtr4g065610 Medicago truncatula HOM05D006682 ORTHO05D008627 2.9e-62 242.3 174 69.0
Solyc09g005870.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 2.9e-62 242.3 172 69.2
CAN.G350.11 Capsicum annuum HOM05D006682 ORTHO05D008627 3.8e-62 241.9 184 67.4
Sopen09g001750 Solanum pennellii HOM05D006682 ORTHO05D008627 3.8e-62 241.9 172 69.8
SGA_v2.0_scaffold42G16114 Striga asiatica HOM05D006682 ORTHO05D008627 5.0e-62 241.5 183 67.2
Solyc03g033990.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 6.5e-62 241.1 172 69.2
Sopen03g006750 Solanum pennellii HOM05D006682 ORTHO05D008627 6.5e-62 241.1 172 69.2
Actinidia16314 Actinidia chinensis HOM05D006682 ORTHO05D008627 8.5e-62 240.7 173 68.2
PGSC0003DMG400009816 Solanum tuberosum HOM05D006682 ORTHO05D008627 1.1e-61 240.4 179 67.6
Sabra03G0151700 Salix brachista HOM05D006682 ORTHO05D008627 1.5e-61 240.0 173 69.9
Potri.003G205200 Populus trichocarpa HOM05D006682 ORTHO05D008627 1.9e-61 239.6 164 71.3
MBI13_g31544_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 1.6e-60 236.5 178 67.4
Psat7g213040 Pisum sativum HOM05D006682 ORTHO05D008627 8.0e-60 234.2 173 67.6
SHI11277 Sapria himalayana HOM05D006682 ORTHO05D008627 1.0e-59 233.8 171 69.0
HPP92_017841 Vanilla planifolia HOM05D006682 ORTHO05D008627 2.3e-59 232.6 181 68.0
Ca_20573_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 3.0e-59 232.3 164 67.1
Ca_30508_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 3.0e-59 232.3 164 67.1
SGA_v2.0_scaffold4G02325 Striga asiatica HOM05D006682 ORTHO05D008627 3.0e-59 232.3 176 69.3
Os10g0545800 Oryza sativa ssp. japonica HOM05D006682 ORTHO05D008627 4.0e-59 231.9 163 69.9
Zm00001eb022720 Zea mays HOM05D006682 ORTHO05D008627 1.3e-57 226.9 179 63.7
ATR0605G320 Amborella trichopoda HOM05D006682 ORTHO05D008627 1.1e-56 223.8 174 67.2
AUR62015492 Chenopodium quinoa HOM05D006682 ORTHO05D008627 2.4e-56 222.6 155 71.0
PSO339G5979 Papaver somniferum HOM05D006682 ORTHO05D008627 2.4e-56 222.6 172 64.0
Zm00001eb394030 Zea mays HOM05D006682 ORTHO05D008627 1.6e-55 219.9 179 62.0
PSO384G2735 Papaver somniferum HOM05D006682 ORTHO05D008627 2.0e-55 219.5 172 63.4
SEGI_12993 Sequoiadendron giganteum HOM05D006682 ORTHO05D008627 3.8e-54 215.3 163 63.8
TPR.G35025 Trifolium pratense HOM05D006682 ORTHO05D008627 1.1e-53 213.8 179 61.5
AUR62002207 Chenopodium quinoa HOM05D006072 ORTHO05D007363 1.5e-53 213.4 151 71.5
Pp3c14_20080 Physcomitrium patens HOM05D006682 ORTHO05D008627 1.5e-50 203.4 165 58.8
Mapoly0003s0021 Marchantia polymorpha HOM05D006682 ORTHO05D008627 1.3e-49 200.3 169 59.2
unitig_26.g10134 Utricularia gibba HOM05D006682 ORTHO05D008627 2.4e-48 196.1 182 60.4
Psat7g244600 Pisum sativum HOM05D006682 ORTHO05D008627 5.2e-43 178.3 127 66.1
HanXRQChr17g0534121 Helianthus annuus HOM05D006682 ORTHO05D008627 2.5e-37 159.5 97 77.3
Nitab4.5_0000492g0110 Nicotiana tabacum HOM05D006682 ORTHO05D008627 1.6e-31 140.2 108 66.7
GSVIVG01025303001 Vitis vinifera HOM05D006682 ORTHO05D008627 2.7e-23 112.8 99 61.6
EL10Ac6g14324 Beta vulgaris HOM05D006682 ORTHO05D007363 1.5e-18 97.1 71 66.2
CBR_g49935 Chara braunii HOM05D000019 ORTHO05D000048 5.4e-16 88.6 124 46.8
Carub.0005s1814 Capsella rubella HOM05D006682 ORTHO05D008627 3.5e-15 85.9 50 74.0
MBI13_g31542_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 1.9e-13 80.1 88 48.9
CBR_g49937 Chara braunii HOM05D000019 ORTHO05D000002 2.1e-12 76.6 64 50.0
Peaxi162Scf00029g00296 Petunia axillaris HOM05D006682 ORTHO05D008627 1.2e-10 70.9 51 66.7
Aqoxy4G00577 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 1.1e-08 64.3 55 65.5


User provided reference genes

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