Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014739 Daucus carota HOM05D006082 ORTHO05D007616 1.2e-79 299.7 146 100.0
Migut.L00265 Erythranthe guttata HOM05D006082 ORTHO05D007616 1.4e-35 153.3 222 41.0
Cc03_g11310 Coffea canephora HOM05D006082 ORTHO05D007616 9.4e-35 150.6 229 38.9
TAR375G0813 Trochodendron aralioides HOM05D006082 ORTHO05D007616 3.6e-34 148.7 217 39.6
HanXRQChr14g0454421 Helianthus annuus HOM05D006082 ORTHO05D007616 7.9e-34 147.5 225 39.6
MSTRG.15681 Avicennia marina HOM05D006082 ORTHO05D007616 2.3e-33 146.0 220 40.0
Nn1g00467 Nelumbo nucifera HOM05D006082 ORTHO05D007616 2.3e-33 146.0 223 39.0
MBI06_g35217_MAGBIO Magnolia biondii HOM05D006082 ORTHO05D007616 3.9e-33 145.2 196 42.3
ECA238G2330 Erigeron canadensis HOM05D006082 ORTHO05D007616 6.7e-33 144.4 223 39.5
arahy.Tifrunner.gnm1.ann1.6SRZ86 Arachis hypogaea HOM05D006082 ORTHO05D007616 8.8e-33 144.1 215 38.1
arahy.Tifrunner.gnm1.ann1.9R6DDK Arachis hypogaea HOM05D006082 ORTHO05D007616 1.1e-32 143.7 215 38.1
TPR.G16094 Trifolium pratense HOM05D006082 ORTHO05D007616 1.1e-32 143.7 233 37.8
Potri.014G107300 Populus trichocarpa HOM05D006082 ORTHO05D007616 1.5e-32 143.3 220 37.7
GSVIVG01027464001 Vitis vinifera HOM05D006082 ORTHO05D007616 1.5e-32 143.3 222 36.9
Lalb_Chr17g0343121 Lupinus albus HOM05D006082 ORTHO05D007616 3.3e-32 142.1 224 37.5
Thecc.01G331100 Theobroma cacao HOM05D006082 ORTHO05D007616 3.3e-32 142.1 219 38.8
Psat3g079600 Pisum sativum HOM05D006082 ORTHO05D007616 5.7e-32 141.4 220 37.7
Haze_15761 Corylus avellana HOM05D006082 ORTHO05D007616 1.3e-31 140.2 215 38.6
Aqoxy5G00354 Aquilegia oxysepala HOM05D006082 ORTHO05D007616 2.8e-31 139.0 222 38.7
Glyma.19G129400 Glycine max HOM05D006082 ORTHO05D007616 3.7e-31 138.7 230 36.1
Lj1g0004702 Lotus japonicus HOM05D006082 ORTHO05D007616 3.7e-31 138.7 232 37.1
Phvul.001G121700 Phaseolus vulgaris HOM05D006082 ORTHO05D007616 4.8e-31 138.3 230 36.1
Duzib133G0864 Durio zibethinus HOM05D006082 ORTHO05D007616 8.2e-31 137.5 221 37.1
PGSC0003DMG400016241 Solanum tuberosum HOM05D006082 ORTHO05D007616 1.1e-30 137.1 227 37.9
AL6G51830 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 1.4e-30 136.7 228 35.5
CAN.G691.19 Capsicum annuum HOM05D006082 ORTHO05D007616 1.4e-30 136.7 227 37.9
PSO675G6409 Papaver somniferum HOM05D006082 ORTHO05D007616 1.4e-30 136.7 224 37.1
C09p01160 Brassica napus HOM05D006082 ORTHO05D007616 1.8e-30 136.3 218 39.0
Carub.0006s3568 Capsella rubella HOM05D006082 ORTHO05D007616 1.8e-30 136.3 230 35.7
Ciclev10022037m.g Citrus clementina HOM05D006082 ORTHO05D007616 1.8e-30 136.3 222 37.8
Glyma.03G126300 Glycine max HOM05D006082 ORTHO05D007616 1.8e-30 136.3 230 36.1
PSO675G6921 Papaver somniferum HOM05D006082 ORTHO05D007616 2.4e-30 136.0 222 37.8
Medtr7g089460 Medicago truncatula HOM05D006082 ORTHO05D007616 3.1e-30 135.6 220 35.9
Sp6g01450 Schrenkiella parvula HOM05D006082 ORTHO05D007616 3.1e-30 135.6 218 38.1
Atru.chr5.795 Acer truncatum HOM05D006082 ORTHO05D007616 4.1e-30 135.2 216 37.5
Eucgr.G03261 Eucalyptus grandis HOM05D006082 ORTHO05D007616 4.1e-30 135.2 223 37.2
A09p01070 Brassica napus HOM05D006082 ORTHO05D007616 5.3e-30 134.8 218 39.0
Solyc11g008790.3 Solanum lycopersicum HOM05D006082 ORTHO05D007616 5.3e-30 134.8 227 37.9
Sopen11g004570 Solanum pennellii HOM05D006082 ORTHO05D007616 5.3e-30 134.8 227 37.9
A10p00890 Brassica napus HOM05D006082 ORTHO05D007616 9.1e-30 134.0 212 36.3
BraA10t42369Z Brassica rapa HOM05D006082 ORTHO05D007616 9.1e-30 134.0 212 36.3
Migut.L00585 Erythranthe guttata HOM05D006082 ORTHO05D007616 9.1e-30 134.0 85 71.8
BolC5t28877H Brassica oleracea HOM05D006082 ORTHO05D007616 1.2e-29 133.7 213 36.6
QL01p017595 Quercus lobata HOM05D006082 ORTHO05D007616 1.2e-29 133.7 218 36.7
AL1G11510 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 1.5e-29 133.3 210 37.6
Thhalv10028930m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 2.0e-29 132.9 220 36.8
THA.LOC104815904 Tarenaya hassleriana HOM05D006082 ORTHO05D007616 3.4e-29 132.1 221 34.4
Thhalv10008618m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 4.5e-29 131.7 211 37.0
Actinidia33031 Actinidia chinensis HOM05D006082 ORTHO05D007616 5.9e-29 131.3 220 38.2
Carub.0001s0120 Capsella rubella HOM05D006082 ORTHO05D007616 5.9e-29 131.3 216 36.6
C05p00920 Brassica napus HOM05D006082 ORTHO05D007616 7.7e-29 131.0 208 37.0
CARHR250170 Cardamine hirsuta HOM05D006082 ORTHO05D007616 1.3e-28 130.2 222 35.1
Gorai.007G114300 Gossypium raimondii HOM05D006082 ORTHO05D007616 1.3e-28 130.2 216 35.6
PGR031G0479 Punica granatum HOM05D006082 ORTHO05D007616 1.3e-28 130.2 224 35.7
BcaB03g13546 Brassica carinata HOM05D006082 ORTHO05D007616 1.7e-28 129.8 207 35.7
Sp1g01290 Schrenkiella parvula HOM05D006082 ORTHO05D007616 1.7e-28 129.8 211 36.5
Gohir.A11G102200 Gossypium hirsutum HOM05D006082 ORTHO05D007616 2.9e-28 129.0 216 35.2
TWI14G1025 Tripterygium wilfordii HOM05D006082 ORTHO05D007616 6.5e-28 127.9 222 35.6
CDE08G0270 Ceratophyllum demersum HOM05D006082 ORTHO05D007616 1.1e-27 127.1 224 34.4
Ah.01g019340 Amaranthus hybridus HOM05D006082 ORTHO05D007616 1.9e-27 126.3 217 35.5
ATR1136G056 Amborella trichopoda HOM05D006082 ORTHO05D007616 5.5e-27 124.8 221 35.3
CARHR001490 Cardamine hirsuta HOM05D006082 ORTHO05D007616 5.5e-27 124.8 211 35.1
Hma1.2p1_0451F.1_g155790 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 9.4e-27 124.0 72 75.0
Aa31LG1G10340 Aethionema arabicum HOM05D006082 ORTHO05D007616 2.7e-26 122.5 220 35.5
Potri.002G181700 Populus trichocarpa HOM05D006082 ORTHO05D007616 3.6e-26 122.1 148 43.9
HPP92_015681 Vanilla planifolia HOM05D006082 ORTHO05D007616 3.6e-26 122.1 222 34.2
Hma1.2p1_0262F.1_g105255 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 6.1e-26 121.3 74 70.3
BolC9t53049H Brassica oleracea HOM05D006082 ORTHO05D007616 7.9e-26 120.9 247 34.4
AUR62016743 Chenopodium quinoa HOM05D006082 ORTHO05D007616 7.9e-26 120.9 215 34.0
Ca_08380_v3 Cicer arietinum L. HOM05D006082 ORTHO05D007616 7.9e-26 120.9 83 65.1
CsaV3_3G007110 Cucumis sativus L. HOM05D006082 ORTHO05D007616 7.9e-26 120.9 225 33.3
BraA09t35778Z Brassica rapa HOM05D006082 ORTHO05D007616 1.8e-25 119.8 246 34.6
Os03g0784300 Oryza sativa ssp. japonica HOM05D006082 ORTHO05D007616 1.8e-25 119.8 224 36.2
Prupe.2G201100 Prunus persica HOM05D006082 ORTHO05D007616 3.0e-25 119.0 220 34.5
Aa31LG5G1260 Aethionema arabicum HOM05D006082 ORTHO05D007616 6.7e-25 117.9 212 33.0
COL.COLO4_23067 Corchorus olitorius HOM05D006082 ORTHO05D007616 1.1e-24 117.1 77 67.5
FAN06G3489 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.1e-24 117.1 220 34.5
RcHm_v2.0_Chr1g0361381 Rosa chinensis HOM05D006082 ORTHO05D007616 1.1e-24 117.1 220 34.1
unitig_899.g14456 Utricularia gibba HOM05D003044 ORTHO05D007616 1.5e-24 116.7 86 62.8
FvH4_7g17940 Fragaria vesca HOM05D006082 ORTHO05D007616 2.0e-24 116.3 220 34.5
MD01G1091900 Malus domestica HOM05D006082 ORTHO05D007616 2.0e-24 116.3 220 34.1
Manes.05G014900 Manihot esculenta HOM05D006082 ORTHO05D007616 2.0e-24 116.3 83 61.4
Dinv04258 Davidia involucrata HOM05D006082 ORTHO05D007616 2.6e-24 115.9 225 33.3
CSS0012451 Camellia sinensis var. sinensis HOM05D006082 ORTHO05D007616 2.8e-23 112.5 157 43.9
FAN03G2817 Fragaria x ananassa HOM05D006082 ORTHO05D007616 2.8e-23 112.5 230 33.0
Gohir.D11G106800 Gossypium hirsutum HOM05D006082 ORTHO05D007616 2.8e-23 112.5 186 38.2
FAN06G1515 Fragaria x ananassa HOM05D006082 ORTHO05D007616 3.7e-23 112.1 226 33.6
AT4G01510 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 6.3e-23 111.3 93 55.9
ClCG05G000050 Citrullus lanatus HOM05D006082 ORTHO05D007616 1.4e-22 110.2 240 30.4
SEGI_04405 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 1.4e-22 110.2 223 32.7
vmacro11192 Vaccinium macrocarpon HOM05D006082 ORTHO05D007616 2.4e-22 109.4 93 55.9
MELO3C005932.2 Cucumis melo HOM05D006082 ORTHO05D007616 4.1e-22 108.6 223 31.4
FAN10G2982 Fragaria x ananassa HOM05D006082 ORTHO05D007616 4.1e-22 108.6 233 32.6
EL10Ac9g21719 Beta vulgaris HOM05D006082 ORTHO05D003517 2.0e-21 106.3 83 61.4
Pp3c10_9330 Physcomitrium patens HOM05D006082 ORTHO05D007616 2.0e-21 106.3 69 63.8
CANSAT56G1086 Cannabis sativa HOM05D006082 ORTHO05D007616 1.0e-20 104.0 80 62.5
SEGI_20928 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 1.0e-20 104.0 64 71.9
CANSAT56G0035 Cannabis sativa HOM05D006082 ORTHO05D007616 1.3e-20 103.6 202 35.1
Lsat_1_v5_gn_2_88861 Lactuca sativa HOM05D006082 ORTHO05D007616 8.5e-20 100.9 191 36.1
Sc24g0001860 Simmondsia chinensis HOM05D006082 ORTHO05D007616 3.2e-19 99.0 190 33.7
C05p00960 Brassica napus HOM05D006082 ORTHO05D007616 1.2e-18 97.1 70 64.3
SMO367G0224 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 2.1e-18 96.3 63 61.9
BolC5t28880H Brassica oleracea HOM05D006082 ORTHO05D007616 8.0e-18 94.4 70 62.9
Nitab4.5_0000743g0220 Nicotiana tabacum HOM05D006082 ORTHO05D007616 1.7e-15 86.7 146 41.1
CBR_g1036 Chara braunii HOM05D006082 ORTHO05D007616 5.3e-14 81.6 66 54.5
Mapoly0050s0018 Marchantia polymorpha HOM05D006082 ORTHO05D007616 5.3e-14 81.6 76 47.4
Nitab4.5_0001677g0060 Nicotiana tabacum HOM05D006082 ORTHO05D007616 1.2e-13 80.5 78 55.1
Peaxi162Scf00090g00046 Petunia axillaris HOM05D006082 ORTHO05D007616 1.6e-13 80.1 256 27.3
AagrBONN_evm.TU.Sc2ySwM_340.22 Anthoceros agrestis HOM05D006082 ORTHO05D007616 2.9e-12 75.9 61 52.5
QL03p043604 Quercus lobata HOM05D006082 ORTHO05D007616 2.9e-12 75.9 112 38.4
arahy.Tifrunner.gnm1.ann1.PGF6M0 Arachis hypogaea HOM05D006082 ORTHO05D007616 3.8e-12 75.5 66 54.5
CiPaw.01G087100 Carya illinoinensis HOM05D006082 ORTHO05D007616 1.9e-11 73.2 67 55.2
MD07G1162500 Malus domestica HOM05D006082 ORTHO05D007616 3.2e-11 72.4 91 41.8
Zm00001eb059810 Zea mays HOM05D006082 ORTHO05D007616 2.1e-10 69.7 198 27.8
GSVIVG01003186001 Vitis vinifera HOM05D006082 ORTHO05D007616 1.0e-09 67.4 115 36.5
FAN01G2730 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.4e-09 67.0 221 26.7
Sed0024729 Sechium edule HOM05D006082 ORTHO05D007616 1.8e-09 66.6 74 41.9
BcaC05g24597 Brassica carinata HOM05D006082 ORTHO05D007616 6.7e-09 64.7 142 30.3
Hma1.2p1_0451F.1_g155800 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 2.0e-08 63.2 46 65.2
AT1G01020 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 5.7e-08 61.6 48 54.2
C05p00940 Brassica napus HOM05D006082 ORTHO05D007616 1.7e-07 60.1 51 54.9
GSVIVG01003191001 Vitis vinifera HOM05D006082 ORTHO05D007616 2.2e-07 59.7 51 54.9
MD07G1162600 Malus domestica HOM05D006082 ORTHO05D007616 3.7e-07 58.9 51 58.8


User provided reference genes

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