Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014735 Daucus carota HOM05D007187 ORTHO05D009219 6.1e-192 674.1 365 100.0
Hma1.2p1_0471F.1_g159290 Hydrangea macrophylla HOM05D007187 ORTHO05D009219 3.9e-122 442.2 298 72.5
GSVIVG01000394001 Vitis vinifera HOM05D007187 ORTHO05D009219 1.3e-120 437.2 341 68.0
Ciclev10020853m.g Citrus clementina HOM05D007187 ORTHO05D009219 2.4e-119 433.0 340 66.2
Lj5C164T17 Lonicera japonica HOM05D007187 ORTHO05D009219 3.4e-118 429.1 321 69.2
Actinidia34651 Actinidia chinensis HOM05D007187 ORTHO05D009219 4.4e-118 428.7 309 70.9
HanXRQChr01g0002671 Helianthus annuus HOM05D007187 ORTHO05D009219 2.7e-115 419.5 302 70.5
ECA238G2937 Erigeron canadensis HOM05D007187 ORTHO05D009219 3.5e-115 419.1 304 71.7
MD06G1234700 Malus domestica HOM05D007187 ORTHO05D009219 4.6e-115 418.7 340 64.4
TAR629G1287 Trochodendron aralioides HOM05D007187 ORTHO05D009219 4.6e-115 418.7 316 69.0
Cc04_g09730 Coffea canephora HOM05D007187 ORTHO05D009219 2.3e-114 416.4 343 65.3
RcHm_v2.0_Chr7g0177701 Rosa chinensis HOM05D007187 ORTHO05D009219 2.3e-114 416.4 307 70.0
Nn4g24583 Nelumbo nucifera HOM05D007187 ORTHO05D009219 3.9e-114 415.6 308 69.5
Rhsim08G0113600 Rhododendron simsii HOM05D007187 ORTHO05D009219 1.1e-113 414.1 312 70.2
Cfa020663 Carpinus fangiana HOM05D007187 ORTHO05D009219 3.3e-113 412.5 307 69.4
Lsat_1_v5_gn_2_15080 Lactuca sativa HOM05D007187 ORTHO05D009219 4.8e-112 408.7 292 71.2
Atru.chr9.1590 Acer truncatum HOM05D007187 ORTHO05D009219 5.8e-110 401.7 305 67.9
FAN13G0144 Fragaria x ananassa HOM05D007187 ORTHO05D009219 7.6e-110 401.4 328 64.9
QL10p033296 Quercus lobata HOM05D007187 ORTHO05D009219 9.9e-110 401.0 342 63.7
QL93p0156_0017 Quercus lobata HOM05D007187 ORTHO05D009219 9.9e-110 401.0 342 63.7
Thecc.03G067300 Theobroma cacao HOM05D007187 ORTHO05D009219 1.3e-109 400.6 333 64.0
Sabra15G0027300 Salix brachista HOM05D007187 ORTHO05D009219 1.9e-108 396.7 315 66.3
Manes.14G173900 Manihot esculenta HOM05D007187 ORTHO05D009219 2.7e-107 392.9 319 63.6
Solyc03g098110.4 Solanum lycopersicum HOM05D007187 ORTHO05D009219 5.1e-106 388.7 286 71.0
Sopen03g028810 Solanum pennellii HOM05D007187 ORTHO05D009219 6.7e-106 388.3 286 70.6
Gohir.A07G061100 Gossypium hirsutum HOM05D007187 ORTHO05D009219 8.7e-106 387.9 333 62.8
Prupe.5G239500 Prunus persica HOM05D007187 ORTHO05D009219 8.7e-106 387.9 325 63.7
CAN.G637.26 Capsicum annuum HOM05D007187 ORTHO05D009219 1.5e-105 387.1 286 69.9
ClCG04G010390 Citrullus lanatus HOM05D007187 ORTHO05D009219 2.5e-105 386.3 329 61.4
Dinv19316 Davidia involucrata HOM05D007187 ORTHO05D009219 3.3e-105 386.0 304 67.8
PGR083G1346 Punica granatum HOM05D007187 ORTHO05D009219 9.6e-105 384.4 298 67.4
Gorai.001G069400 Gossypium raimondii HOM05D007187 ORTHO05D009219 1.3e-104 384.0 333 62.2
PSO063G6433 Papaver somniferum HOM05D007187 ORTHO05D009219 1.3e-104 384.0 346 59.5
Peaxi162Scf00171g00732 Petunia axillaris HOM05D007187 ORTHO05D009219 1.3e-104 384.0 299 67.6
Gohir.D07G065800 Gossypium hirsutum HOM05D007187 ORTHO05D009219 1.6e-104 383.6 333 62.2
PGSC0003DMG400031050 Solanum tuberosum HOM05D007187 ORTHO05D009219 1.6e-104 383.6 287 69.7
Sed0020940 Sechium edule HOM05D007187 ORTHO05D009219 2.8e-104 382.9 309 64.1
MELO3C002156.2 Cucumis melo HOM05D007187 ORTHO05D009219 4.0e-103 379.0 323 61.9
SalBow5G2942 Salvia bowleyana HOM05D007187 ORTHO05D009219 5.3e-103 378.6 294 68.0
CsaV3_1G007400 Cucumis sativus L. HOM05D007187 ORTHO05D009219 9.0e-103 377.9 323 61.9
Aqoxy3G04047 Aquilegia oxysepala HOM05D007187 ORTHO05D009219 1.2e-102 377.5 306 62.7
PSO782G3824 Papaver somniferum HOM05D007187 ORTHO05D009219 1.2e-102 377.5 292 66.1
Nitab4.5_0000936g0080 Nicotiana tabacum HOM05D007187 ORTHO05D009219 1.5e-102 377.1 279 70.3
AT1G73470 Arabidopsis thaliana HOM05D007187 ORTHO05D009219 4.5e-102 375.6 314 63.4
Eucgr.H00587 Eucalyptus grandis HOM05D007187 ORTHO05D009219 7.6e-102 374.8 290 66.6
arahy.Tifrunner.gnm1.ann1.RE1P9T Arachis hypogaea HOM05D007187 ORTHO05D009219 1.3e-101 374.0 320 63.1
Thhalv10018766m.g Eutrema salsugineum HOM05D007187 ORTHO05D009219 1.7e-101 373.6 332 60.8
MSTRG.11527 Avicennia marina HOM05D007187 ORTHO05D009219 2.9e-101 372.9 333 63.1
A02p18740 Brassica napus HOM05D007187 ORTHO05D009219 6.5e-101 371.7 323 61.9
Carub.0002s2020 Capsella rubella HOM05D007187 ORTHO05D009219 6.5e-101 371.7 314 62.7
TWI15G0155 Tripterygium wilfordii HOM05D007187 ORTHO05D009219 6.5e-101 371.7 341 59.8
arahy.Tifrunner.gnm1.ann1.ZBK6XN Arachis hypogaea HOM05D007187 ORTHO05D009219 1.1e-100 370.9 300 66.0
C02p31110 Brassica napus HOM05D007187 ORTHO05D009219 1.1e-100 370.9 322 62.4
AL2G33240 Arabidopsis lyrata HOM05D007187 ORTHO05D009219 1.4e-100 370.5 335 60.6
Nitab4.5_0004454g0040 Nicotiana tabacum HOM05D007187 ORTHO05D009219 5.5e-100 368.6 278 69.1
HPP92_016177 Vanilla planifolia HOM05D007187 ORTHO05D009219 1.2e-99 367.5 313 62.0
HPP92_026739 Vanilla planifolia HOM05D007187 ORTHO05D009219 1.6e-99 367.1 304 63.2
Migut.O00232 Erythranthe guttata HOM05D007187 ORTHO05D009219 2.1e-99 366.7 318 61.9
LjContig00484g0006565 Lotus japonicus HOM05D007187 ORTHO05D009219 2.7e-99 366.3 300 65.7
Sp5g28650 Schrenkiella parvula HOM05D007187 ORTHO05D009219 2.7e-99 366.3 337 59.6
BolC2t09155H Brassica oleracea HOM05D007187 ORTHO05D009219 2.3e-98 363.2 327 61.2
Aa31LG4G3710 Aethionema arabicum HOM05D007187 ORTHO05D009219 1.9e-97 360.1 333 59.2
ATR0598G346 Amborella trichopoda HOM05D007187 ORTHO05D009219 1.1e-95 354.4 312 60.9
Nitab4.5_0000021g0400 Nicotiana tabacum HOM05D007187 ORTHO05D009219 1.1e-95 354.4 277 68.6
VMungo0251G3256 Vigna mungo HOM05D007187 ORTHO05D009219 3.1e-95 352.8 298 62.8
Phvul.002G332600 Phaseolus vulgaris HOM05D007187 ORTHO05D009219 4.1e-95 352.4 298 63.4
TPR.G1397 Trifolium pratense HOM05D007187 ORTHO05D009219 1.5e-94 350.5 309 60.5
FvH4_5g17910 Fragaria vesca HOM05D007187 ORTHO05D009219 1.7e-93 347.1 265 66.8
BraA02t06916Z Brassica rapa HOM05D007187 ORTHO05D009219 5.0e-93 345.5 339 57.5
Hma1.2p1_0471F.1_g159280 Hydrangea macrophylla HOM05D007187 ORTHO05D009219 1.2e-91 340.9 234 71.8
MD14G1241900 Malus domestica HOM05D007187 ORTHO05D009219 5.1e-90 335.5 341 55.4
CiPaw.15G149500 Carya illinoinensis HOM05D007187 ORTHO05D009219 4.8e-88 328.9 283 61.8
SGA_v2.0_scaffold90G27781 Striga asiatica HOM05D007187 ORTHO05D009219 8.5e-85 318.2 295 58.6
Lalb_Chr16g0386871 Lupinus albus HOM05D007187 ORTHO05D009219 2.6e-78 296.6 291 58.4
Ca_17169_v3 Cicer arietinum L. HOM05D005071 ORTHO05D006069 8.5e-77 291.6 252 61.9
Glyma.08G057000 Glycine max HOM05D007187 ORTHO05D009219 1.2e-75 287.7 257 60.7
Potri.015G033200 Populus trichocarpa HOM05D007187 ORTHO05D009219 3.5e-70 269.6 231 61.9
vmacro17853 Vaccinium macrocarpon HOM05D007187 ORTHO05D009219 1.2e-67 261.2 345 46.7
SMO137G0317 Selaginella moellendorffii HOM05D007187 ORTHO05D009219 1.6e-67 260.8 350 44.6
Sc10g0008990 Simmondsia chinensis HOM05D007187 ORTHO05D009219 1.8e-66 257.3 258 55.0
Pp3c24_15180 Physcomitrium patens HOM05D007187 ORTHO05D009219 5.2e-66 255.8 310 49.4
Hund22370 Selenicereus undatus HOM05D007187 ORTHO05D009219 6.7e-66 255.4 317 50.2
Mapoly0047s0078 Marchantia polymorpha HOM05D007187 ORTHO05D009219 3.3e-65 253.1 291 50.2
Haze_18954 Corylus avellana HOM05D007187 ORTHO05D009219 3.7e-64 249.6 353 45.6
SEGI_30595 Sequoiadendron giganteum HOM05D007187 ORTHO05D009219 2.4e-63 246.9 286 50.3
AagrBONN_evm.TU.Sc2ySwM_228.159 Anthoceros agrestis HOM05D007187 ORTHO05D009219 2.7e-62 243.4 295 47.1
EL10Ac8g19490 Beta vulgaris HOM05D007187 ORTHO05D009219 1.1e-60 238.0 312 47.8
CBR_g23710 Chara braunii HOM05D000019 ORTHO05D000002 9.8e-57 224.9 303 45.2
Psat7g000640 Pisum sativum HOM05D007187 ORTHO05D009219 3.1e-55 219.9 241 51.5
SMO134G0127 Selaginella moellendorffii HOM05D007187 ORTHO05D009219 2.7e-54 216.9 241 51.0
Cpa.g.sc7.111 Carica papaya HOM05D007187 ORTHO05D009219 1.4e-50 204.5 161 63.4
FAN08G2087 Fragaria x ananassa HOM05D007187 ORTHO05D009219 1.2e-46 191.4 134 68.7
FAN18G0372 Fragaria x ananassa HOM05D007187 ORTHO05D009219 1.2e-46 191.4 134 68.7
FAN08G0101 Fragaria x ananassa HOM05D007187 ORTHO05D009219 4.3e-44 183.0 237 47.7
Zm00001eb314540 Zea mays HOM05D007187 ORTHO05D009219 1.2e-43 181.4 209 49.3
CARHR066500 Cardamine hirsuta HOM05D007187 ORTHO05D009219 2.0e-41 174.1 168 58.3
Os09g0448900 Oryza sativa ssp. japonica HOM05D007187 ORTHO05D009219 5.6e-36 156.0 135 62.2
MSTRG.10865 Avicennia marina HOM05D007187 ORTHO05D009219 6.4e-32 142.5 100 76.0
Ah.14g085920 Amaranthus hybridus HOM05D005606 ORTHO05D001302 1.0e-29 135.2 282 35.5
MSTRG.10866 Avicennia marina HOM05D007187 ORTHO05D009219 1.9e-28 131.0 103 65.0
CDE11G1050 Ceratophyllum demersum HOM05D007187 ORTHO05D009219 2.1e-27 127.5 108 62.0
Aqoxy3G04295 Aquilegia oxysepala HOM05D007187 ORTHO05D009219 4.1e-23 113.2 101 61.4
Aqoxy3G04293 Aquilegia oxysepala HOM05D007187 ORTHO05D009219 4.7e-19 99.8 90 61.1
Cre09.g407450 Chlamydomonas reinhardtii HOM05D007187 ORTHO05D009219 3.1e-18 97.1 412 24.3
Cpa.g.sc7.112 Carica papaya HOM05D007187 ORTHO05D009219 6.8e-18 95.9 70 64.3
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 8.4e-16 89.0 110 50.9
RcHm_v2.0_Chr6g0283931 Rosa chinensis HOM05D007187 ORTHO05D009219 2.8e-11 73.9 58 62.1
PRCOL_00002241 Prasinoderma coloniale HOM05D007187 ORTHO05D009219 2.7e-06 57.4 288 26.4
A07p29800 Brassica napus HOM05D007187 ORTHO05D040946 7.8e-06 55.8 74 50.0


User provided reference genes

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