Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014725 Daucus carota HOM05D005212 ORTHO05D006353 4.5e-172 607.8 308 100.0
Rhsim09G0094100 Rhododendron simsii HOM05D005212 ORTHO05D006353 1.9e-101 373.2 315 62.9
Potri.001G461100 Populus trichocarpa HOM05D005212 ORTHO05D006353 1.1e-98 364.0 325 59.7
CSS0012951 Camellia sinensis var. sinensis HOM05D005212 ORTHO05D006353 2.5e-98 362.8 325 59.1
CiPaw.05G194300 Carya illinoinensis HOM05D005212 ORTHO05D006353 3.3e-98 362.5 325 58.5
Nn3g18288 Nelumbo nucifera HOM05D005212 ORTHO05D006353 5.6e-98 361.7 326 59.2
TWI60G0083 Tripterygium wilfordii HOM05D005212 ORTHO05D006353 1.1e-96 357.5 321 58.3
Haze_10945 Corylus avellana HOM05D005212 ORTHO05D006353 3.1e-96 355.9 311 58.2
GSVIVG01023834001 Vitis vinifera HOM05D005212 ORTHO05D006353 4.5e-95 352.1 325 56.0
Atru.chr12.1198 Acer truncatum HOM05D005212 ORTHO05D006353 1.9e-93 346.7 331 57.1
Prupe.8G002300 Prunus persica HOM05D005212 ORTHO05D006353 5.5e-93 345.1 326 57.1
HanXRQChr12g0363921 Helianthus annuus HOM05D005212 ORTHO05D006353 7.1e-93 344.7 326 57.7
ECA233G1697 Erigeron canadensis HOM05D005212 ORTHO05D006353 2.1e-92 343.2 331 55.3
Lalb_Chr07g0187701 Lupinus albus HOM05D005212 ORTHO05D006353 3.5e-92 342.4 321 56.4
Duzib268G0887 Durio zibethinus HOM05D005212 ORTHO05D006353 7.9e-92 341.3 325 56.3
Migut.E00446 Erythranthe guttata HOM05D005212 ORTHO05D006353 1.3e-91 340.5 325 54.8
Solyc04g007850.3 Solanum lycopersicum HOM05D005212 ORTHO05D006353 1.3e-91 340.5 326 54.3
Manes.17G080300 Manihot esculenta HOM05D005212 ORTHO05D006353 5.1e-91 338.6 319 54.9
Sopen04g002980 Solanum pennellii HOM05D005212 ORTHO05D006353 1.1e-90 337.4 326 54.0
Sed0020748 Sechium edule HOM05D005212 ORTHO05D006353 1.5e-90 337.0 328 55.2
Gohir.D09G202000 Gossypium hirsutum HOM05D005212 ORTHO05D006353 2.5e-90 336.3 325 54.2
Gohir.D13G128200 Gossypium hirsutum HOM05D005212 ORTHO05D006353 3.3e-90 335.9 324 54.0
Gorai.013G143600 Gossypium raimondii HOM05D005212 ORTHO05D006353 3.3e-90 335.9 324 54.0
Prupe.1G329700 Prunus persica HOM05D005212 ORTHO05D006353 4.3e-90 335.5 324 55.2
Gorai.006G225800 Gossypium raimondii HOM05D005212 ORTHO05D006353 5.6e-90 335.1 325 54.2
Peaxi162Scf00723g00423 Petunia axillaris HOM05D005212 ORTHO05D006353 7.4e-90 334.7 335 52.8
Lj4g0012207 Lotus japonicus HOM05D005212 ORTHO05D006353 1.3e-89 334.0 322 56.8
Gohir.A09G208525 Gossypium hirsutum HOM05D005212 ORTHO05D006353 1.6e-89 333.6 326 54.3
Ciclev10028815m.g Citrus clementina HOM05D005212 ORTHO05D006353 2.1e-89 333.2 327 54.7
TPR.G5141 Trifolium pratense HOM05D005212 ORTHO05D006353 2.1e-89 333.2 325 56.3
Glyma.08G095400 Glycine max HOM05D005212 ORTHO05D006353 2.8e-89 332.8 321 55.1
Medtr3g088850 Medicago truncatula HOM05D005212 ORTHO05D006353 8.2e-89 331.3 326 56.1
Oeu014050.1 Olea europaea HOM05D005212 ORTHO05D006353 1.1e-88 330.9 313 57.5
HanXRQChr08g0212231 Helianthus annuus HOM05D005212 ORTHO05D006353 1.4e-88 330.5 324 55.2
Medtr3g096970 Medicago truncatula HOM05D005212 ORTHO05D006353 1.8e-88 330.1 326 57.1
RcHm_v2.0_Chr4g0443611 Rosa chinensis HOM05D005212 ORTHO05D006353 1.8e-88 330.1 327 55.7
CAN.G458.6 Capsicum annuum HOM05D005212 ORTHO05D006353 2.4e-88 329.7 326 54.3
Thecc.04G190200 Theobroma cacao HOM05D005212 ORTHO05D006353 2.4e-88 329.7 325 55.1
Gohir.A13G124600 Gossypium hirsutum HOM05D005212 ORTHO05D006353 3.1e-88 329.3 320 53.4
Ca_24783_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 9.0e-88 327.8 324 55.6
MD16G1023100 Malus domestica HOM05D005212 ORTHO05D006353 1.2e-87 327.4 274 59.9
PGR102G0858 Punica granatum HOM05D005212 ORTHO05D006353 1.2e-87 327.4 322 54.0
FvH4_4g34100 Fragaria vesca HOM05D005212 ORTHO05D006353 3.4e-87 325.9 327 54.7
Hma1.2p1_0060F.1_g032750 Hydrangea macrophylla HOM05D005212 ORTHO05D006353 3.4e-87 325.9 326 57.7
RcHm_v2.0_Chr3g0448371 Rosa chinensis HOM05D005212 ORTHO05D006353 5.8e-87 325.1 326 54.9
Psat7g082520 Pisum sativum HOM05D005212 ORTHO05D006353 2.2e-86 323.2 324 55.6
THA.LOC104816387 Tarenaya hassleriana HOM05D005212 ORTHO05D006353 2.9e-86 322.8 324 53.1
Nitab4.5_0009115g0010 Nicotiana tabacum HOM05D005212 ORTHO05D006353 4.9e-86 322.0 327 54.1
TPR.G18569 Trifolium pratense HOM05D005212 ORTHO05D006353 6.5e-86 321.6 325 54.5
Duzib151G1103 Durio zibethinus HOM05D005212 ORTHO05D006353 1.1e-85 320.9 325 54.5
QL03p033836 Quercus lobata HOM05D005212 ORTHO05D006353 3.2e-85 319.3 294 57.8
Ciclev10017606m.g Citrus clementina HOM05D005212 ORTHO05D006353 4.2e-85 318.9 318 56.0
BcaC02g07097 Brassica carinata HOM05D005212 ORTHO05D006353 7.1e-85 318.2 325 51.7
Thhalv10001552m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 1.2e-84 317.4 326 54.3
BolC4t28609H Brassica oleracea HOM05D000073 ORTHO05D006353 1.6e-84 317.0 325 51.7
Lsat_1_v5_gn_4_8681 Lactuca sativa HOM05D005212 ORTHO05D006353 1.6e-84 317.0 314 54.1
GSVIVG01011709001 Vitis vinifera HOM05D005212 ORTHO05D006353 2.1e-84 316.6 339 51.6
PGSC0003DMG400029477 Solanum tuberosum HOM05D005212 ORTHO05D006353 2.7e-84 316.2 298 53.7
vmacro10659 Vaccinium macrocarpon HOM05D005212 ORTHO05D006353 3.5e-84 315.8 303 56.1
Sp4g26600 Schrenkiella parvula HOM05D005212 ORTHO05D006353 7.9e-84 314.7 326 53.7
EL10Ac9g21945 Beta vulgaris HOM05D005212 ORTHO05D006353 1.0e-83 314.3 326 51.5
SalBow2G0696 Salvia bowleyana HOM05D005212 ORTHO05D006353 1.0e-83 314.3 276 57.2
AL4G43530 Arabidopsis lyrata HOM05D005212 ORTHO05D006353 2.3e-83 313.2 328 52.1
Sabra16G0312600 Salix brachista HOM05D005212 ORTHO05D006353 3.0e-83 312.8 349 51.9
C04p71050 Brassica napus HOM05D000073 ORTHO05D006698 8.7e-83 311.2 318 51.6
CsaV3_5G028340 Cucumis sativus L. HOM05D005212 ORTHO05D006353 4.3e-82 308.9 328 51.5
AT2G44510 Arabidopsis thaliana HOM05D005212 ORTHO05D006353 5.7e-82 308.5 328 52.1
A04p33360 Brassica napus HOM05D000073 ORTHO05D006698 7.4e-82 308.1 313 51.8
BraA04t18796Z Brassica rapa HOM05D000073 ORTHO05D000033 3.7e-81 305.8 330 50.3
Eucgr.H01942 Eucalyptus grandis HOM05D005212 ORTHO05D006353 4.8e-81 305.4 341 51.9
Phvul.005G028500 Phaseolus vulgaris HOM05D005212 ORTHO05D006353 6.3e-81 305.1 334 52.1
Lj3C867T4 Lonicera japonica HOM05D005212 ORTHO05D006353 8.2e-81 304.7 305 53.8
CARHR139690 Cardamine hirsuta HOM05D005212 ORTHO05D006353 1.4e-80 303.9 326 52.1
CANSAT01G1481 Cannabis sativa HOM05D005212 ORTHO05D006353 3.1e-80 302.8 325 52.0
Aqoxy7G01425 Aquilegia oxysepala HOM05D005212 ORTHO05D006353 4.1e-80 302.4 313 55.3
Carub.0004s2707 Capsella rubella HOM05D005212 ORTHO05D006353 4.1e-80 302.4 324 51.9
Dinv36246 Davidia involucrata HOM05D005212 ORTHO05D006353 1.3e-78 297.4 310 54.5
SGA_v2.0_scaffold39G15210 Striga asiatica HOM05D005212 ORTHO05D006353 1.7e-78 297.0 324 50.6
Aa31LG1G21440 Aethionema arabicum HOM05D005212 ORTHO05D006353 3.8e-78 295.8 332 49.1
Ca_01441_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 1.6e-76 290.4 293 54.6
Ah.11g044490 Amaranthus hybridus HOM05D005212 ORTHO05D006353 7.9e-76 288.1 332 49.7
BcaB06g29383 Brassica carinata HOM05D005212 ORTHO05D006353 3.0e-75 286.2 325 48.0
AUR62008760 Chenopodium quinoa HOM05D005212 ORTHO05D006353 2.5e-74 283.1 326 50.3
Sc10g0005560 Simmondsia chinensis HOM05D005212 ORTHO05D006353 3.3e-74 282.7 294 52.4
Oeu063592.1 Olea europaea HOM05D005212 ORTHO05D006353 4.3e-74 282.3 276 55.1
Manes.15G130900 Manihot esculenta HOM05D005212 ORTHO05D006353 9.7e-74 281.2 304 51.6
Dinv28041 Davidia involucrata HOM05D005212 ORTHO05D006353 1.7e-73 280.4 249 61.0
FAN07G0183 Fragaria x ananassa HOM05D005212 ORTHO05D006353 2.8e-73 279.6 314 50.3
Sed0012238 Sechium edule HOM05D005212 ORTHO05D006353 2.8e-73 279.6 233 58.8
ClCG01G006340 Citrullus lanatus HOM05D005212 ORTHO05D006353 6.3e-73 278.5 356 46.3
ATR0829G227 Amborella trichopoda HOM05D005212 ORTHO05D006353 4.2e-69 265.8 313 48.6
FAN12G1848 Fragaria x ananassa HOM05D005212 ORTHO05D006353 1.6e-68 263.8 299 50.8
HPP92_020815 Vanilla planifolia HOM05D005212 ORTHO05D006353 4.7e-68 262.3 341 45.2
MSTRG.13603 Avicennia marina HOM05D005212 ORTHO05D006353 1.4e-67 260.8 214 60.7
FAN22G0397 Fragaria x ananassa HOM05D005212 ORTHO05D006353 1.4e-67 260.8 328 47.0
FAN17G0532 Fragaria x ananassa HOM05D005212 ORTHO05D006353 1.7e-65 253.8 303 49.2
Zm00001eb210590 Zea mays HOM05D005212 ORTHO05D006353 8.2e-65 251.5 295 46.4
Os03g0853900 Oryza sativa ssp. japonica HOM05D005212 ORTHO05D006353 3.1e-64 249.6 346 42.5
PSO339G5759 Papaver somniferum HOM05D005212 ORTHO05D006353 7.0e-64 248.4 339 46.0
PSO017G4317 Papaver somniferum HOM05D005212 ORTHO05D006353 5.9e-63 245.4 339 45.4
MELO3C005296.2 Cucumis melo HOM05D005212 ORTHO05D006353 7.7e-63 245.0 326 44.5
VMungo1080G0912 Vigna mungo HOM05D005212 ORTHO05D006353 1.7e-62 243.8 314 48.1
PSO478G2757 Papaver somniferum HOM05D005212 ORTHO05D006353 2.9e-62 243.0 340 44.4
Mapoly0006s0099 Marchantia polymorpha HOM05D005212 ORTHO05D006353 1.8e-59 233.8 266 45.1
Hund05206 Selenicereus undatus HOM05D005212 ORTHO05D006353 2.2e-57 226.9 274 48.2
BcaC01g05169 Brassica carinata HOM05D005212 ORTHO05D006353 2.8e-57 226.5 274 49.3
Ca_09937_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 3.1e-56 223.0 209 55.5
Ca_09949_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 3.1e-56 223.0 209 55.5
Cc04_g08850 Coffea canephora HOM05D005212 ORTHO05D006353 3.1e-56 223.0 172 61.6
PSO384G3589 Papaver somniferum HOM05D005212 ORTHO05D006353 3.8e-54 216.1 307 44.6
Pp3c25_10280 Physcomitrium patens HOM05D005212 ORTHO05D006353 1.5e-53 214.2 268 44.8
Thhalv10014438m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 4.2e-53 212.6 222 54.1
AUR62025478 Chenopodium quinoa HOM05D005212 ORTHO05D006353 5.5e-53 212.2 216 53.7
AagrBONN_evm.TU.Sc2ySwM_344.3756 Anthoceros agrestis HOM05D005212 ORTHO05D006353 7.2e-53 211.8 273 41.8
AUR62014218 Chenopodium quinoa HOM05D005212 ORTHO05D006353 2.6e-50 203.4 232 51.7
SMO334G0102 Selaginella moellendorffii HOM05D005212 ORTHO05D006353 2.2e-49 200.3 241 43.2
AUR62014219 Chenopodium quinoa HOM05D005212 ORTHO05D006353 3.1e-48 196.4 274 43.4
BcaNung07052 Brassica carinata HOM05D005212 ORTHO05D006353 4.5e-47 192.6 325 38.8
BolC3t15307H Brassica oleracea HOM05D005212 ORTHO05D006353 2.1e-44 183.7 210 49.0
CiPaw.06G048200 Carya illinoinensis HOM05D005212 ORTHO05D006353 2.3e-43 180.3 333 39.3
COL.COLO4_35970 Corchorus olitorius HOM05D005212 ORTHO05D006353 2.0e-42 177.2 172 51.7
CDE04G0882 Ceratophyllum demersum HOM05D005212 ORTHO05D006353 5.7e-42 175.6 150 58.0
AUR62018080 Chenopodium quinoa HOM05D005212 ORTHO05D006353 9.1e-40 168.3 217 41.9
BcaB01g03308 Brassica carinata HOM05D005212 ORTHO05D006353 1.0e-38 164.9 220 42.7
unitig_22.g5595 Utricularia gibba HOM05D005212 ORTHO05D006353 6.6e-38 162.2 179 48.0
AT5G03830 Arabidopsis thaliana HOM05D005212 ORTHO05D006353 1.5e-37 161.0 245 42.4
C03p29590 Brassica napus HOM05D005212 ORTHO05D006353 2.5e-37 160.2 214 45.3
Cpa.g.sc1084.4 Carica papaya HOM05D005212 ORTHO05D006353 5.5e-37 159.1 122 60.7
Hund24107 Selenicereus undatus HOM05D005212 ORTHO05D006353 6.8e-35 152.1 130 58.5
AL6G13400 Arabidopsis lyrata HOM05D005212 ORTHO05D006353 1.2e-31 141.4 143 50.3
MCO05G230 Micromonas commoda HOM05D005212 ORTHO05D006353 4.5e-31 139.4 249 33.7
Cc04_g08860 Coffea canephora HOM05D005212 ORTHO05D006353 3.9e-30 136.3 142 56.3
SEGI_04595 Sequoiadendron giganteum HOM05D005212 ORTHO05D006353 2.5e-29 133.7 159 42.8
CBR_g30204 Chara braunii HOM05D000019 ORTHO05D000353 6.8e-27 125.6 146 45.9
Thhalv10015472m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 8.9e-27 125.2 137 53.3
Cre03.g200991 Chlamydomonas reinhardtii HOM05D005212 ORTHO05D006353 3.7e-25 119.8 276 27.9
unitig_22.g5596 Utricularia gibba HOM05D005212 ORTHO05D006353 2.0e-23 114.0 136 50.7
Sabra11G0142300 Salix brachista HOM05D005212 ORTHO05D006353 3.3e-21 106.7 138 47.1
AUR62014216 Chenopodium quinoa HOM05D005212 ORTHO05D006353 1.2e-20 104.8 221 35.7
Peaxi162Scf00376g00010 Petunia axillaris HOM05D005212 ORTHO05D006353 2.4e-16 90.5 167 37.1
Cfa023609 Carpinus fangiana HOM05D005212 ORTHO05D006353 3.0e-14 83.6 172 30.8
Aqoxy6G02632 Aquilegia oxysepala HOM05D005212 ORTHO05D006353 1.1e-11 75.1 69 60.9
ATR0594G067 Amborella trichopoda HOM05D005212 ORTHO05D006353 2.9e-09 67.0 80 45.0
Peaxi162Scf00376g00009 Petunia axillaris HOM05D005212 ORTHO05D006353 3.9e-06 56.6 31 77.4


User provided reference genes

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