Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014702 Daucus carota HOM05D003020 ORTHO05D003226 1.3e-140 503.1 253 100.0
DCAR_017969 Daucus carota HOM05D003020 ORTHO05D003226 5.3e-70 268.5 268 59.0
Oeu042166.1 Olea europaea HOM05D003020 ORTHO05D003226 1.4e-38 164.1 268 43.7
Hma1.2p1_1025F.1_g249270 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 3.3e-35 152.9 276 40.9
Actinidia04141 Actinidia chinensis HOM05D003020 ORTHO05D003226 2.8e-34 149.8 264 42.0
RcHm_v2.0_Chr4g0402471 Rosa chinensis HOM05D003020 ORTHO05D003226 8.0e-34 148.3 249 40.6
Lj9P685T21 Lonicera japonica HOM05D003020 ORTHO05D003226 1.2e-32 144.4 231 42.4
Cfa013505 Carpinus fangiana HOM05D003020 ORTHO05D003226 1.5e-32 144.1 257 41.6
Haze_22098 Corylus avellana HOM05D003020 ORTHO05D003226 2.6e-32 143.3 263 41.8
FvH4_4g08220 Fragaria vesca HOM05D003020 ORTHO05D003226 2.6e-32 143.3 260 40.0
FAN12G0399 Fragaria x ananassa HOM05D003020 ORTHO05D003226 3.4e-32 142.9 260 40.0
Dinv41250 Davidia involucrata HOM05D003020 ORTHO05D003226 7.5e-32 141.7 269 41.3
FAN22G0428 Fragaria x ananassa HOM05D003020 ORTHO05D003226 2.2e-31 140.2 261 39.5
Prupe.1G086100 Prunus persica HOM05D003020 ORTHO05D003226 2.9e-31 139.8 265 40.0
FAN07G1960 Fragaria x ananassa HOM05D003020 ORTHO05D003226 3.7e-31 139.4 261 39.5
FAN17G2997 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.1e-30 137.9 261 38.3
Atru.chr7.633 Acer truncatum HOM05D003020 ORTHO05D003226 9.2e-30 134.8 264 40.5
Cpa.g.sc95.49 Carica papaya HOM05D003020 ORTHO05D003226 9.2e-30 134.8 257 40.9
TAR625G0330 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.2e-29 134.4 266 39.5
CiPaw.05G049400 Carya illinoinensis HOM05D003020 ORTHO05D003226 6.0e-29 132.1 249 41.0
Manes.14G153400 Manihot esculenta HOM05D003020 ORTHO05D003226 6.0e-29 132.1 244 40.2
MD13G1253900 Malus domestica HOM05D003020 ORTHO05D003226 3.0e-28 129.8 258 36.8
Manes.14G153300 Manihot esculenta HOM05D003020 ORTHO05D003226 1.1e-27 127.9 264 37.5
DCAR_019362 Daucus carota HOM05D003020 ORTHO05D003226 1.5e-27 127.5 175 51.4
Oeu004196.1 Olea europaea HOM05D003020 ORTHO05D003226 1.5e-27 127.5 240 43.3
CANSAT11G1249 Cannabis sativa HOM05D003020 ORTHO05D003226 2.5e-27 126.7 271 37.6
CiPaw.08G036400 Carya illinoinensis HOM05D003020 ORTHO05D003226 4.3e-27 125.9 249 38.2
QL02p097728 Quercus lobata HOM05D003020 ORTHO05D003226 4.3e-27 125.9 277 38.6
Duzib168G2116 Durio zibethinus HOM05D003020 ORTHO05D003226 7.3e-27 125.2 256 39.8
Manes.14G153500 Manihot esculenta HOM05D003020 ORTHO05D003226 1.2e-26 124.4 245 38.4
Thecc.09G173200 Theobroma cacao HOM05D003020 ORTHO05D003226 1.2e-26 124.4 252 38.5
Rhsim01G0004800 Rhododendron simsii HOM05D003020 ORTHO05D003226 1.6e-26 124.0 265 37.7
Glyma.20G083700 Glycine max HOM05D003020 ORTHO05D003226 2.1e-26 123.6 230 38.3
PGR102G0964 Punica granatum HOM05D003020 ORTHO05D003226 2.8e-26 123.2 299 34.4
CiPaw.07G192300 Carya illinoinensis HOM05D003020 ORTHO05D003226 3.6e-26 122.9 257 37.7
Potri.018G092800 Populus trichocarpa HOM05D003020 ORTHO05D003226 3.6e-26 122.9 251 43.4
COL.COLO4_35897 Corchorus olitorius HOM05D003020 ORTHO05D003226 1.4e-25 120.9 263 39.2
ECA234G3857 Erigeron canadensis HOM05D003020 ORTHO05D003226 1.4e-25 120.9 256 37.1
Lsat_1_v5_gn_5_84881 Lactuca sativa HOM05D003020 ORTHO05D003226 1.8e-25 120.6 257 37.0
Oeu025224.1 Olea europaea HOM05D003020 ORTHO05D003226 2.3e-25 120.2 258 37.6
HanXRQChr09g0244991 Helianthus annuus HOM05D003020 ORTHO05D003226 4.0e-25 119.4 304 35.2
VMungo1215G0012 Vigna mungo HOM05D003020 ORTHO05D003226 4.0e-25 119.4 262 34.0
Gohir.D08G094000 Gossypium hirsutum HOM05D003020 ORTHO05D003226 5.2e-25 119.0 258 38.4
Psat0s2889g0080 Pisum sativum HOM05D003020 ORTHO05D003226 5.2e-25 119.0 272 37.9
Glyma.17G063300 Glycine max HOM05D003020 ORTHO05D003226 6.8e-25 118.6 261 35.6
Gohir.A08G084400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 6.8e-25 118.6 262 38.5
Lsat_1_v5_gn_7_54521 Lactuca sativa HOM05D003020 ORTHO05D003226 6.8e-25 118.6 253 39.5
MD16G1257900 Malus domestica HOM05D003020 ORTHO05D003226 8.9e-25 118.2 263 38.0
Medtr4g128160 Medicago truncatula HOM05D003020 ORTHO05D003226 8.9e-25 118.2 262 37.4
Lalb_Chr12g0199391 Lupinus albus HOM05D003020 ORTHO05D003226 1.2e-24 117.9 258 37.2
MSTRG.6214 Avicennia marina HOM05D003020 ORTHO05D003226 1.5e-24 117.5 215 40.9
Thhalv10026023m.g Eutrema salsugineum HOM05D003020 ORTHO05D003226 1.5e-24 117.5 245 35.9
Lj9C24T7 Lonicera japonica HOM05D003020 ORTHO05D003226 1.5e-24 117.5 236 38.6
DCAR_031845 Daucus carota HOM05D003020 ORTHO05D003226 2.0e-24 117.1 164 50.0
Phvul.003G146000 Phaseolus vulgaris HOM05D003020 ORTHO05D003226 2.6e-24 116.7 198 40.9
Potri.006G168400 Populus trichocarpa HOM05D003020 ORTHO05D003226 3.4e-24 116.3 239 40.2
Ca_21174_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 9.9e-24 114.8 258 35.3
Ca_21223_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 9.9e-24 114.8 258 35.3
Duzib170G0355 Durio zibethinus HOM05D003020 ORTHO05D003226 9.9e-24 114.8 267 39.3
Lj9A26T13 Lonicera japonica HOM05D003020 ORTHO05D003226 1.3e-23 114.4 234 38.5
ClCG06G013330 Citrullus lanatus HOM05D003020 ORTHO05D003226 2.9e-23 113.2 255 37.6
MELO3C017464.2 Cucumis melo HOM05D003020 ORTHO05D003226 2.9e-23 113.2 264 36.0
ECA240G3460 Erigeron canadensis HOM05D003020 ORTHO05D003226 3.7e-23 112.8 269 36.1
A03p59690 Brassica napus HOM05D003020 ORTHO05D003226 1.4e-22 110.9 255 34.5
Duzib150G1089 Durio zibethinus HOM05D003020 ORTHO05D003226 1.9e-22 110.5 218 41.7
CsaV3_1G031590 Cucumis sativus L. HOM05D003020 ORTHO05D003226 2.4e-22 110.2 266 35.0
Lj4g0004544 Lotus japonicus HOM05D003020 ORTHO05D003226 2.4e-22 110.2 272 33.1
Ciclev10010819m.g Citrus clementina HOM05D003020 ORTHO05D003226 3.2e-22 109.8 292 35.6
Gorai.004G031500 Gossypium raimondii HOM05D003020 ORTHO05D003226 4.1e-22 109.4 252 37.3
Dinv42724 Davidia involucrata HOM05D003020 ORTHO05D003226 5.4e-22 109.0 258 37.2
Dinv43377 Davidia involucrata HOM05D003020 ORTHO05D003226 5.4e-22 109.0 258 37.2
Sed0018084 Sechium edule HOM05D003020 ORTHO05D003226 5.4e-22 109.0 249 36.9
Migut.J01478 Erythranthe guttata HOM05D003020 ORTHO05D003226 7.1e-22 108.6 265 35.1
TAR383G0860 Trochodendron aralioides HOM05D003020 ORTHO05D003226 9.2e-22 108.2 259 36.3
AT4G30230 Arabidopsis thaliana HOM05D003020 ORTHO05D003226 1.2e-21 107.8 258 36.0
BraA03t15021Z Brassica rapa HOM05D003020 ORTHO05D003226 1.2e-21 107.8 251 33.5
AL7G21920 Arabidopsis lyrata HOM05D003020 ORTHO05D003226 2.7e-21 106.7 266 36.1
Lalb_Chr07g0180461 Lupinus albus HOM05D003020 ORTHO05D003226 3.5e-21 106.3 205 38.5
Carub.0007s1038 Capsella rubella HOM05D003020 ORTHO05D003226 4.6e-21 105.9 260 34.6
Gohir.D08G033900 Gossypium hirsutum HOM05D003020 ORTHO05D003226 4.6e-21 105.9 251 37.1
Sp7g28110 Schrenkiella parvula HOM05D003020 ORTHO05D003226 4.6e-21 105.9 258 34.5
TPR.G5404 Trifolium pratense HOM05D003020 ORTHO05D003226 4.6e-21 105.9 304 32.6
Sabra18G0080000 Salix brachista HOM05D003020 ORTHO05D003226 6.0e-21 105.5 216 41.7
Sed0024933 Sechium edule HOM05D003020 ORTHO05D003226 6.0e-21 105.5 247 36.4
TAR383G0645 Trochodendron aralioides HOM05D003020 ORTHO05D003226 7.8e-21 105.1 265 36.2
C07p57710 Brassica napus HOM05D003020 ORTHO05D003226 1.0e-20 104.8 245 35.1
BolC7t46232H Brassica oleracea HOM05D003020 ORTHO05D003226 1.0e-20 104.8 245 35.1
Nn2g12774 Nelumbo nucifera HOM05D003020 ORTHO05D003226 1.3e-20 104.4 259 34.4
SalBow6G2220 Salvia bowleyana HOM05D003020 ORTHO05D003226 1.7e-20 104.0 262 38.5
Gohir.A08G023400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 2.3e-20 103.6 252 36.5
Eucgr.C00156 Eucalyptus grandis HOM05D003020 ORTHO05D003226 5.1e-20 102.4 256 34.8
Ciclev10010534m.g Citrus clementina HOM05D003020 ORTHO05D003226 8.6e-20 101.7 275 34.2
TAR383G0698 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.3e-19 99.8 267 38.2
TAR636G2901 Trochodendron aralioides HOM05D003020 ORTHO05D003226 5.6e-19 99.0 266 35.3
Sabra06G0129900 Salix brachista HOM05D003020 ORTHO05D003226 9.5e-19 98.2 197 41.1
THA.LOC104803497 Tarenaya hassleriana HOM05D003020 ORTHO05D003226 2.8e-18 96.7 251 36.7
Gorai.004G099800 Gossypium raimondii HOM05D003020 ORTHO05D003226 3.6e-18 96.3 149 45.6
BcaNung03008 Brassica carinata HOM05D003020 ORTHO05D003226 3.1e-17 93.2 239 31.4
CARHR238140 Cardamine hirsuta HOM05D003020 ORTHO05D003226 4.0e-17 92.8 251 33.1
Eucgr.C02308 Eucalyptus grandis HOM05D003020 ORTHO05D003226 2.0e-16 90.5 267 32.2
BcaC09g51805 Brassica carinata HOM05D003020 ORTHO05D003226 9.9e-16 88.2 248 31.0
C01p08830 Brassica napus HOM05D003020 ORTHO05D003226 9.9e-16 88.2 248 31.0
BolC1t00873H Brassica oleracea HOM05D003020 ORTHO05D003226 9.9e-16 88.2 248 31.0
A01p07910 Brassica napus HOM05D003020 ORTHO05D003226 1.3e-15 87.8 242 31.4
BraA01t00737Z Brassica rapa HOM05D003020 ORTHO05D003226 1.3e-15 87.8 242 31.4
Aa31LG2G20290 Aethionema arabicum HOM05D003020 ORTHO05D003226 1.7e-15 87.4 248 32.3
TAR626G0085 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.7e-15 87.4 257 29.6
TAR383G0288 Trochodendron aralioides HOM05D003020 ORTHO05D003226 4.9e-15 85.9 254 31.1
Aqoxy7G03070 Aquilegia oxysepala HOM05D003020 ORTHO05D003226 6.4e-15 85.5 271 32.5
THA.LOC104819978 Tarenaya hassleriana HOM05D003020 ORTHO05D003226 8.4e-15 85.1 252 33.3
TWI63G1498 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 8.4e-15 85.1 243 35.4
TAR626G1849 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.2e-14 83.2 258 28.7
MBI14_g17368_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D000358 5.4e-14 82.4 261 29.5
QL08p056680 Quercus lobata HOM05D003020 ORTHO05D003226 3.9e-12 76.3 273 27.5
TWI34G0269 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 1.5e-11 74.3 258 31.8
Migut.K00242 Erythranthe guttata HOM05D003020 ORTHO05D003226 5.6e-11 72.4 266 26.7
CiPaw.02G176000 Carya illinoinensis HOM05D003020 ORTHO05D003226 7.3e-11 72.0 281 29.9
CiPaw.07G071600 Carya illinoinensis HOM05D003020 ORTHO05D003226 8.1e-10 68.6 274 28.5
BcaNung00532 Brassica carinata HOM05D003020 ORTHO05D003226 1.4e-09 67.8 221 33.0
Cpa.g.sc53.28 Carica papaya HOM05D003020 ORTHO05D003226 1.8e-09 67.4 257 25.7
AUR62033218 Chenopodium quinoa HOM05D000002 ORTHO05D000001 6.9e-09 65.5 154 33.1
PGR044G1634 Punica granatum HOM05D003020 ORTHO05D003226 9.0e-09 65.1 263 29.7
Duzib106G1942 Durio zibethinus HOM05D003020 ORTHO05D003226 1.2e-08 64.7 275 28.0
Thecc.10G069300 Theobroma cacao HOM05D003020 ORTHO05D003226 1.5e-08 64.3 290 29.0
PSO170G3450 Papaver somniferum HOM05D003020 ORTHO05D003226 2.6e-08 63.5 266 28.2
Hma1.2p1_0453F.1_g156030 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 4.4e-08 62.8 244 25.8
MBI16_g42581_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D003226 4.4e-08 62.8 233 28.8
MBI16_g41356_MAGBIO Magnolia biondii HOM05D003020 ORTHO05D003226 5.8e-08 62.4 224 29.5
AUR62021300 Chenopodium quinoa HOM05D003020 ORTHO05D003226 9.9e-08 61.6 157 30.6
Sabra10G0168900 Salix brachista HOM05D003020 ORTHO05D003226 9.9e-08 61.6 241 29.5
Manes.07G102900 Manihot esculenta HOM05D003020 ORTHO05D003226 1.3e-07 61.2 268 25.7
ClCG09G020480 Citrullus lanatus HOM05D003020 ORTHO05D003226 1.7e-07 60.8 271 28.0
EL10Ac8g18285 Beta vulgaris HOM05D003020 ORTHO05D003226 2.9e-07 60.1 151 31.8
Eucgr.J01120 Eucalyptus grandis HOM05D003020 ORTHO05D003226 3.8e-07 59.7 255 26.3
Potri.008G043300 Populus trichocarpa HOM05D003020 ORTHO05D003226 3.8e-07 59.7 266 27.8
Prupe.2G217400 Prunus persica HOM05D003020 ORTHO05D003226 8.4e-07 58.5 256 27.0
FAN10G0626 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.4e-06 57.8 258 25.6
Dinv31353 Davidia involucrata HOM05D003020 ORTHO05D003226 5.4e-06 55.8 222 29.7
FAN03G1700 Fragaria x ananassa HOM05D003020 ORTHO05D003226 5.4e-06 55.8 258 26.0
Sabra08G0029900 Salix brachista HOM05D003020 ORTHO05D003226 5.4e-06 55.8 266 28.6
Sc18g0007500 Simmondsia chinensis HOM05D003020 ORTHO05D003226 5.4e-06 55.8 157 31.8
Dinv31354 Davidia involucrata HOM05D003020 ORTHO05D003226 7.1e-06 55.5 237 27.4
CiPaw.01G275700 Carya illinoinensis HOM05D003020 ORTHO05D003226 9.3e-06 55.1 241 28.2


User provided reference genes

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