Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014667 Daucus carota HOM05D003811 ORTHO05D004470 5.4e-190 667.5 344 100.0
DCAR_018030 Daucus carota HOM05D003811 ORTHO05D004470 6.2e-130 468.0 324 77.8
Cfa013454 Carpinus fangiana HOM05D003811 ORTHO05D004470 1.6e-93 347.1 353 58.1
Dinv25445 Davidia involucrata HOM05D003811 ORTHO05D004470 7.2e-86 321.6 320 57.8
CSS0000053 Camellia sinensis var. sinensis HOM05D003811 ORTHO05D004470 2.7e-85 319.7 348 56.0
TAR620G0001 Trochodendron aralioides HOM05D003811 ORTHO05D004470 1.8e-84 317.0 350 54.6
CiPaw.07G197300 Carya illinoinensis HOM05D003811 ORTHO05D004470 9.8e-83 311.2 354 55.1
FAN22G1182 Fragaria x ananassa HOM05D003811 ORTHO05D004470 4.8e-82 308.9 348 56.0
Peaxi162Scf01038g00011 Petunia axillaris HOM05D003811 ORTHO05D004470 1.1e-81 307.8 372 51.6
Nitab4.5_0000491g0080 Nicotiana tabacum HOM05D003811 ORTHO05D004470 1.3e-79 300.8 369 49.9
RcHm_v2.0_Chr4g0399481 Rosa chinensis HOM05D003811 ORTHO05D004470 1.7e-79 300.4 338 54.1
FAN17G0360 Fragaria x ananassa HOM05D003811 ORTHO05D004470 5.0e-79 298.9 348 55.2
Cc06_g20840 Coffea canephora HOM05D003811 ORTHO05D004470 8.5e-79 298.1 324 56.2
vmacro05996 Vaccinium macrocarpon HOM05D003811 ORTHO05D004470 1.1e-78 297.7 336 55.1
Duzib168G0111 Durio zibethinus HOM05D003811 ORTHO05D004470 5.5e-78 295.4 340 55.6
Nitab4.5_0000949g0010 Nicotiana tabacum HOM05D003811 ORTHO05D004470 5.5e-78 295.4 372 49.7
Nitab4.5_0000949g0020 Nicotiana tabacum HOM05D003811 ORTHO05D004470 1.6e-77 293.9 370 50.0
CAN.G192.5 Capsicum annuum HOM05D003811 ORTHO05D004470 2.1e-77 293.5 346 52.3
FvH4_4g07270 Fragaria vesca HOM05D003811 ORTHO05D004470 1.4e-76 290.8 357 52.7
FAN12G0553 Fragaria x ananassa HOM05D003811 ORTHO05D004470 4.0e-76 289.3 348 52.3
MBI13_g34046_MAGBIO Magnolia biondii HOM05D003811 ORTHO05D004470 1.5e-75 287.3 335 53.7
Oeu018819.1 Olea europaea HOM05D003811 ORTHO05D004470 4.4e-75 285.8 336 53.3
MD13G1239300 Malus domestica HOM05D003811 ORTHO05D004470 9.8e-75 284.6 357 50.7
PGSC0003DMG400022983 Solanum tuberosum HOM05D003811 ORTHO05D004470 9.8e-75 284.6 379 48.5
FAN07G1538 Fragaria x ananassa HOM05D003811 ORTHO05D004470 1.3e-74 284.3 348 53.4
Hma1.2p1_1326F.1_g275850 Hydrangea macrophylla HOM05D003811 ORTHO05D004470 1.7e-74 283.9 348 50.3
GSVIVG01010855001 Vitis vinifera HOM05D003811 ORTHO05D004470 8.3e-74 281.6 323 53.3
vmacro20813 Vaccinium macrocarpon HOM05D003832 ORTHO05D004365 1.1e-73 281.2 321 51.7
Aqoxy7G02811 Aquilegia oxysepala HOM05D003811 ORTHO05D004470 4.5e-72 275.8 362 50.8
Sabra18G0116100 Salix brachista HOM05D003811 ORTHO05D004470 5.9e-72 275.4 377 47.7
Migut.L01879 Erythranthe guttata HOM05D003811 ORTHO05D004470 7.7e-72 275.0 345 51.9
Lj5C615T3 Lonicera japonica HOM05D003811 ORTHO05D004470 1.7e-71 273.9 382 50.8
Sopen07g004460 Solanum pennellii HOM05D003811 ORTHO05D004470 5.0e-71 272.3 378 46.0
Manes.06G019300 Manihot esculenta HOM05D003811 ORTHO05D004470 1.9e-70 270.4 338 52.7
Rhsim01G0116800 Rhododendron simsii HOM05D003811 ORTHO05D004470 3.3e-70 269.6 321 50.8
Solyc07g008540.3 Solanum lycopersicum HOM05D003811 ORTHO05D004470 3.3e-70 269.6 379 45.9
Thecc.09G186300 Theobroma cacao HOM05D003811 ORTHO05D004470 4.3e-70 269.2 336 53.0
Ciclev10008308m.g Citrus clementina HOM05D003811 ORTHO05D004470 7.3e-70 268.5 352 50.3
Oeu006847.1 Olea europaea HOM05D003811 ORTHO05D004470 7.3e-70 268.5 338 50.0
Rhsim03G0266200 Rhododendron simsii HOM05D003811 ORTHO05D004470 1.2e-69 267.7 366 48.6
Dinv41179 Davidia involucrata HOM05D003811 ORTHO05D004470 8.0e-69 265.0 321 51.7
Lsat_1_v5_gn_7_56240 Lactuca sativa HOM05D003811 ORTHO05D004470 1.5e-67 260.8 346 52.3
TWI63G0214 Tripterygium wilfordii HOM05D003811 ORTHO05D004470 1.5e-67 260.8 314 50.6
FAN02G0923 Fragaria x ananassa HOM05D003811 ORTHO05D004470 1.3e-66 257.7 346 48.8
Eucgr.C00112 Eucalyptus grandis HOM05D003811 ORTHO05D004470 6.4e-66 255.4 328 51.2
Oeu034800.1 Olea europaea HOM05D003811 ORTHO05D004470 1.4e-65 254.2 338 49.7
Potri.006G075200 Populus trichocarpa HOM05D003811 ORTHO05D004470 2.4e-65 253.4 366 46.7
Cpa.g.sc95.8 Carica papaya HOM05D003811 ORTHO05D004470 1.2e-64 251.1 392 46.9
Oeu019552.1 Olea europaea HOM05D003811 ORTHO05D004470 1.2e-64 251.1 350 47.7
MELO3C003975.2 Cucumis melo HOM05D003811 ORTHO05D004470 1.6e-64 250.8 352 48.3
MD16G1248400 Malus domestica HOM05D003811 ORTHO05D004470 1.6e-64 250.8 355 49.0
Nn8g40778 Nelumbo nucifera HOM05D003811 ORTHO05D004470 1.6e-64 250.8 324 49.7
ClCG11G011760 Citrullus lanatus HOM05D003811 ORTHO05D004470 2.0e-64 250.4 369 46.6
CsaV3_2G008720 Cucumis sativus L. HOM05D003811 ORTHO05D004470 3.5e-64 249.6 349 48.4
Lj5C612T1 Lonicera japonica HOM05D003811 ORTHO05D004470 4.6e-64 249.2 374 48.4
MSTRG.10438 Avicennia marina HOM05D003811 ORTHO05D004470 1.7e-63 247.3 329 49.5
Migut.J00797 Erythranthe guttata HOM05D003811 ORTHO05D004470 3.0e-63 246.5 343 49.0
arahy.Tifrunner.gnm1.ann1.YRC4PH Arachis hypogaea HOM05D003811 ORTHO05D004470 3.9e-63 246.1 350 48.9
arahy.Tifrunner.gnm1.ann1.0QJD35 Arachis hypogaea HOM05D003811 ORTHO05D004470 5.0e-63 245.7 350 48.9
FvH4_6g24780 Fragaria vesca HOM05D003811 ORTHO05D004470 1.5e-62 244.2 353 47.9
Duzib150G1212 Durio zibethinus HOM05D003811 ORTHO05D004470 2.5e-62 243.4 339 47.8
Potri.018G142100 Populus trichocarpa HOM05D003811 ORTHO05D004470 2.5e-62 243.4 377 44.0
Sabra06G0055900 Salix brachista HOM05D003811 ORTHO05D004470 5.6e-62 242.3 358 45.3
Atru.chr7.754 Acer truncatum HOM05D003811 ORTHO05D004470 3.6e-61 239.6 318 50.3
Atru.chr7.775 Acer truncatum HOM05D003811 ORTHO05D004470 3.6e-61 239.6 318 50.3
Hund13780 Selenicereus undatus HOM05D003811 ORTHO05D004470 4.7e-61 239.2 364 46.7
Manes.14G159300 Manihot esculenta HOM05D003811 ORTHO05D004470 6.2e-61 238.8 339 47.8
Ah.10g036890 Amaranthus hybridus HOM05D003811 ORTHO05D004470 1.2e-59 234.6 383 44.9
Ca_27932_v3 Cicer arietinum L. HOM05D003811 ORTHO05D004470 2.6e-59 233.4 333 48.0
Prupe.1G074900 Prunus persica HOM05D003811 ORTHO05D004470 7.5e-59 231.9 357 44.8
TWI34G1601 Tripterygium wilfordii HOM05D003811 ORTHO05D004470 7.5e-59 231.9 314 47.5
MBI16_g05834_MAGBIO Magnolia biondii HOM05D003811 ORTHO05D004470 4.9e-58 229.2 327 48.3
MSTRG.26548 Avicennia marina HOM05D003811 ORTHO05D004470 6.4e-58 228.8 332 46.1
Sc10g0001710 Simmondsia chinensis HOM05D003811 ORTHO05D004470 6.4e-58 228.8 350 47.7
VMungo1215G0314 Vigna mungo HOM05D003811 ORTHO05D004470 1.4e-57 227.6 327 48.6
Psat4g013600 Pisum sativum HOM05D003811 ORTHO05D004470 7.0e-57 225.3 331 50.2
Medtr4g127420 Medicago truncatula HOM05D003811 ORTHO05D004470 1.6e-56 224.2 324 49.4
CDE06G2566 Ceratophyllum demersum HOM05D003811 ORTHO05D004470 3.5e-56 223.0 316 47.2
CiPaw.08G032400 Carya illinoinensis HOM05D003811 ORTHO05D004470 4.6e-56 222.6 327 47.1
ECA240G2391 Erigeron canadensis HOM05D003811 ORTHO05D004470 7.8e-56 221.9 344 45.1
Sed0004951 Sechium edule HOM05D003811 ORTHO05D004470 5.0e-55 219.2 362 44.5
Sed0025374 Sechium edule HOM05D003811 ORTHO05D004470 5.0e-55 219.2 358 43.9
HanXRQChr03g0065501 Helianthus annuus HOM05D003811 ORTHO05D004470 1.1e-54 218.0 405 40.7
Lalb_Chr07g0180651 Lupinus albus HOM05D003811 ORTHO05D004470 1.5e-54 217.6 319 48.3
Glyma.13G100700 Glycine max HOM05D003811 ORTHO05D004470 7.3e-54 215.3 331 46.8
Lalb_Chr13g0299991 Lupinus albus HOM05D003811 ORTHO05D004470 1.6e-53 214.2 324 47.5
Hund16072 Selenicereus undatus HOM05D003811 ORTHO05D004470 2.1e-53 213.8 372 44.6
HanXRQChr09g0245431 Helianthus annuus HOM05D003811 ORTHO05D004470 2.8e-53 213.4 381 42.3
SalBow5G0957 Salvia bowleyana HOM05D003811 ORTHO05D004470 4.7e-53 212.6 327 44.6
Ah.16g102470 Amaranthus hybridus HOM05D003811 ORTHO05D008019 6.2e-53 212.2 359 44.0
Lj4g0014027 Lotus japonicus HOM05D003811 ORTHO05D004470 6.2e-53 212.2 334 47.3
SalBow5G4432 Salvia bowleyana HOM05D003811 ORTHO05D004470 6.2e-53 212.2 327 45.6
Glyma.17G059100 Glycine max HOM05D003811 ORTHO05D004470 1.4e-52 211.1 332 46.1
EL10Ac2g04726 Beta vulgaris HOM05D003811 ORTHO05D004470 4.0e-52 209.5 363 44.4
Lsat_1_v5_gn_8_69001 Lactuca sativa HOM05D003811 ORTHO05D004470 6.8e-52 208.8 329 47.1
unitig_8.g4051 Utricularia gibba HOM05D003811 ORTHO05D004470 2.0e-51 207.2 290 47.2
unitig_22.g5159 Utricularia gibba HOM05D003811 ORTHO05D004470 6.4e-50 202.2 281 49.5
HanXRQChr10g0308851 Helianthus annuus HOM05D003811 ORTHO05D004470 8.3e-50 201.8 339 46.0
Lsat_1_v5_gn_5_83141 Lactuca sativa HOM05D003811 ORTHO05D004470 3.2e-49 199.9 337 46.0
AUR62040721 Chenopodium quinoa HOM05D003811 ORTHO05D004470 1.6e-48 197.6 360 44.4
QL02p046940 Quercus lobata HOM05D003811 ORTHO05D004470 1.0e-47 194.9 349 44.1
TPR.G32975 Trifolium pratense HOM05D003811 ORTHO05D004470 3.0e-47 193.4 329 45.3
AUR62012114 Chenopodium quinoa HOM05D003811 ORTHO05D004470 1.5e-46 191.0 364 43.1
Phvul.003G141200 Phaseolus vulgaris HOM05D003811 ORTHO05D004470 1.5e-46 191.0 326 44.2
Lalb_Chr12g0199621 Lupinus albus HOM05D003811 ORTHO05D004470 5.6e-46 189.1 317 45.1
Eucgr.C02219 Eucalyptus grandis HOM05D003811 ORTHO05D004470 7.3e-46 188.7 335 43.3
Thhalv10013517m.g Eutrema salsugineum HOM05D003811 ORTHO05D004470 9.5e-46 188.3 388 37.9
PSO170G1122 Papaver somniferum HOM05D003811 ORTHO05D004470 6.8e-44 182.2 347 44.1
COL.COLO4_07099 Corchorus olitorius HOM05D003811 ORTHO05D004470 1.5e-43 181.0 338 40.5
Sp6g18910 Schrenkiella parvula HOM05D003811 ORTHO05D004470 3.4e-43 179.9 395 37.7
PSO063G0992 Papaver somniferum HOM05D003811 ORTHO05D004470 4.4e-43 179.5 350 43.7
Gohir.D05G002600 Gossypium hirsutum HOM05D003811 ORTHO05D004470 6.4e-42 175.6 277 47.7
Aa31LG3G13080 Aethionema arabicum HOM05D003811 ORTHO05D004470 1.9e-41 174.1 407 38.8
Gohir.A05G002200 Gossypium hirsutum HOM05D003811 ORTHO05D004470 3.2e-41 173.3 276 47.5
PGR001G0001 Punica granatum HOM05D003811 ORTHO05D004470 4.1e-41 172.9 333 42.6
Gorai.009G002400 Gossypium raimondii HOM05D003811 ORTHO05D004470 7.1e-41 172.2 277 46.6
C01p21610 Brassica napus HOM05D003811 ORTHO05D004470 3.9e-39 166.4 360 38.3
BolC1t02080H Brassica oleracea HOM05D003811 ORTHO05D004470 3.9e-39 166.4 360 38.3
Thhalv10025322m.g Eutrema salsugineum HOM05D003811 ORTHO05D004470 3.9e-39 166.4 353 38.2
BcaC09g50723 Brassica carinata HOM05D003811 ORTHO05D004470 3.3e-38 163.3 360 38.1
AL7G27010 Arabidopsis lyrata HOM05D003811 ORTHO05D004470 5.6e-38 162.5 335 37.0
BcaC06g32778 Brassica carinata HOM05D003811 ORTHO05D004470 3.6e-37 159.8 324 40.4
Actinidia38496 Actinidia chinensis HOM05D003811 ORTHO05D004470 4.7e-37 159.5 165 56.4
BcaB05g22326 Brassica carinata HOM05D003811 ORTHO05D004470 2.4e-36 157.1 352 36.9
Sp7g24010 Schrenkiella parvula HOM05D003811 ORTHO05D004470 5.2e-36 156.0 348 36.8
A01p17250 Brassica napus HOM05D003811 ORTHO05D004470 8.9e-36 155.2 342 37.1
AT5G57180 Arabidopsis thaliana HOM05D003811 ORTHO05D004470 7.6e-35 152.1 369 37.1
BraA03t14705Z Brassica rapa HOM05D003811 ORTHO05D004470 7.6e-35 152.1 327 39.8
BraA01t01681Z Brassica rapa HOM05D003811 ORTHO05D004470 9.9e-35 151.8 342 37.1
CARHR270970 Cardamine hirsuta HOM05D003811 ORTHO05D004470 9.9e-35 151.8 375 37.3
AT4G25990 Arabidopsis thaliana HOM05D003811 ORTHO05D004470 2.9e-34 150.2 256 41.4
A02p08670 Brassica napus HOM05D003811 ORTHO05D004470 6.4e-34 149.1 326 38.0
BolC7t45947H Brassica oleracea HOM05D003811 ORTHO05D004470 8.4e-34 148.7 337 37.7
BraA02t05937Z Brassica rapa HOM05D003811 ORTHO05D004470 1.1e-33 148.3 327 37.9
SGA_v2.0_scaffold31G12764 Striga asiatica HOM05D003811 ORTHO05D004470 1.4e-33 147.9 350 40.0
BcaC04g19992 Brassica carinata HOM05D003811 ORTHO05D004470 2.4e-33 147.1 322 37.6
BolC9t57752H Brassica oleracea HOM05D003811 ORTHO05D004470 4.2e-33 146.4 330 37.9
HanXRQChr05g0141071 Helianthus annuus HOM05D003811 ORTHO05D004470 1.6e-32 144.4 295 40.7
C09p49010 Brassica napus HOM05D003811 ORTHO05D004470 2.1e-32 144.1 339 36.9
Carub.0007s1496 Capsella rubella HOM05D003811 ORTHO05D004470 2.1e-32 144.1 339 38.9
CARHR233500 Cardamine hirsuta HOM05D003811 ORTHO05D004470 2.1e-32 144.1 341 35.5
AL8G33110 Arabidopsis lyrata HOM05D003811 ORTHO05D004470 2.7e-32 143.7 374 36.1
C07p54590 Brassica napus HOM05D003811 ORTHO05D004470 7.8e-32 142.1 337 36.8
BcaC03g14176 Brassica carinata HOM05D003811 ORTHO05D004470 5.1e-31 139.4 324 36.1
C02p14510 Brassica napus HOM05D003811 ORTHO05D004470 5.1e-31 139.4 324 36.1
BolC2t07575H Brassica oleracea HOM05D003811 ORTHO05D004470 5.1e-31 139.4 324 36.1
BcaB08g36076 Brassica carinata HOM05D003811 ORTHO05D004470 1.9e-30 137.5 342 37.1
SGA_v2.0_scaffold511G52626 Striga asiatica HOM05D003811 ORTHO05D004470 1.3e-29 134.8 323 37.2
A10p14570 Brassica napus HOM05D003811 ORTHO05D004470 2.8e-29 133.7 304 37.2
ECA234G4485 Erigeron canadensis HOM05D003811 ORTHO05D004470 4.8e-29 132.9 175 51.4
Glyma.09G059800 Glycine max HOM05D003811 ORTHO05D004470 1.1e-28 131.7 364 35.7
HPP92_017127 Vanilla planifolia HOM05D003811 ORTHO05D004470 1.4e-28 131.3 345 35.9
HPP92_010287 Vanilla planifolia HOM05D003811 ORTHO05D004470 1.8e-28 131.0 333 35.4
FAN05G4809 Fragaria x ananassa HOM05D003811 ORTHO05D004470 1.2e-27 128.3 185 47.6
BraA10t43544Z Brassica rapa HOM05D003811 ORTHO05D004470 2.0e-27 127.5 302 36.4
BcaNung03775 Brassica carinata HOM05D003811 ORTHO05D004470 7.6e-27 125.6 357 34.7
Glyma.15G166500 Glycine max HOM05D003811 ORTHO05D004470 6.4e-26 122.5 329 35.0
Carub.0008s1769 Capsella rubella HOM05D003811 ORTHO05D004470 9.3e-25 118.6 370 33.2
ECA236G3708 Erigeron canadensis HOM05D003811 ORTHO05D004470 2.7e-24 117.1 280 36.4
Medtr2g038010 Medicago truncatula HOM05D003811 ORTHO05D004470 2.7e-24 117.1 345 35.4
Ca_02108_v3 Cicer arietinum L. HOM05D003811 ORTHO05D004470 3.5e-24 116.7 327 37.0
Psat1g144040 Pisum sativum HOM05D003811 ORTHO05D004470 3.9e-23 113.2 332 37.3
Actinidia29953 Actinidia chinensis HOM05D003811 ORTHO05D004470 5.1e-23 112.8 143 48.3
A03p56350 Brassica napus HOM05D003811 ORTHO05D004470 4.3e-22 109.8 325 33.8
Phvul.009G236100 Phaseolus vulgaris HOM05D003811 ORTHO05D004470 2.8e-21 107.1 286 35.3
TPR.G7568 Trifolium pratense HOM05D002228 ORTHO05D002347 3.6e-21 106.7 324 35.5
SGA_v2.0_scaffold112G31580 Striga asiatica HOM05D003811 ORTHO05D004470 1.1e-20 105.1 267 36.0
FAN24G1311 Fragaria x ananassa HOM05D003811 ORTHO05D004470 1.8e-20 104.4 120 50.0
Oeu064847.1 Olea europaea HOM05D003811 ORTHO05D004470 3.1e-20 103.6 112 58.0
Os02g0148000 Oryza sativa ssp. japonica HOM05D003811 ORTHO05D004470 9.0e-20 102.1 284 35.9
FvH4_2g01490 Fragaria vesca HOM05D003811 ORTHO05D004470 1.2e-19 101.7 110 50.9
ATR0626G357 Amborella trichopoda HOM05D003811 ORTHO05D004470 2.2e-18 97.4 238 39.5
FAN05G5342 Fragaria x ananassa HOM05D003811 ORTHO05D004470 1.1e-17 95.1 85 65.9
Zm00001eb208040 Zea mays HOM05D003811 ORTHO05D004470 1.3e-15 88.2 279 34.1
Zm00001eb272980 Zea mays HOM05D018649 ORTHO05D004470 1.8e-15 87.8 365 32.6
Zm00001eb226810 Zea mays HOM05D018649 ORTHO05D004470 6.7e-15 85.9 359 31.5
Os06g0699600 Oryza sativa ssp. japonica HOM05D003811 ORTHO05D004470 3.7e-13 80.1 234 34.2
Lsat_1_v5_gn_5_27801 Lactuca sativa HOM05D003811 ORTHO05D036460 2.9e-10 70.5 88 43.2
Lsat_1_v5_gn_5_45681 Lactuca sativa HOM05D003811 ORTHO05D036460 6.5e-10 69.3 72 45.8
Lsat_1_v5_gn_9_75161 Lactuca sativa HOM05D003811 ORTHO05D036460 7.9e-08 62.4 72 44.4
Lsat_1_v5_gn_6_95500 Lactuca sativa HOM05D003811 ORTHO05D004470 1.3e-07 61.6 152 35.5


User provided reference genes

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