Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014590 Daucus carota HOM05D006829 ORTHO05D008742 1.9e-121 439.1 214 100.0
Haze_17346 Corylus avellana HOM05D006829 ORTHO05D008742 1.4e-66 256.9 216 63.0
Cfa001216 Carpinus fangiana HOM05D006829 ORTHO05D008742 2.6e-65 252.7 216 61.6
Cfa001217 Carpinus fangiana HOM05D006829 ORTHO05D008742 2.6e-65 252.7 216 61.6
Lj1C965T6 Lonicera japonica HOM05D006829 ORTHO05D008742 2.8e-64 249.2 173 69.9
CiPaw.01G305500 Carya illinoinensis HOM05D006829 ORTHO05D008742 4.5e-62 241.9 198 64.6
Prupe.2G262600 Prunus persica HOM05D006829 ORTHO05D008742 5.9e-62 241.5 227 58.1
Ah.10g026720 Amaranthus hybridus HOM05D006829 ORTHO05D008742 6.5e-61 238.0 166 70.5
MELO3C020140.2 Cucumis melo HOM05D006829 ORTHO05D008742 2.5e-60 236.1 185 64.3
CsaV3_5G010870 Cucumis sativus L. HOM05D006829 ORTHO05D008742 2.5e-60 236.1 194 63.9
Hund15829 Selenicereus undatus HOM05D006829 ORTHO05D008742 4.2e-60 235.3 196 61.7
CSS0026526 Camellia sinensis var. sinensis HOM05D006829 ORTHO05D008742 1.6e-59 233.4 211 60.7
Sc14g0005620 Simmondsia chinensis HOM05D006829 ORTHO05D008742 2.7e-59 232.6 203 61.1
Duzib114G0477 Durio zibethinus HOM05D006829 ORTHO05D008742 4.7e-59 231.9 193 63.2
ClCG07G005040 Citrullus lanatus HOM05D006829 ORTHO05D008742 6.1e-59 231.5 214 59.8
MD01G1164900 Malus domestica HOM05D006829 ORTHO05D008742 6.1e-59 231.5 220 58.2
TAR636G3228 Trochodendron aralioides HOM05D006829 ORTHO05D008742 6.1e-59 231.5 177 66.1
Cc02_g05470 Coffea canephora HOM05D006829 ORTHO05D008742 8.0e-59 231.1 187 62.6
FvH4_7g25740 Fragaria vesca HOM05D006829 ORTHO05D008742 8.0e-59 231.1 204 61.3
FAN01G1374 Fragaria x ananassa HOM05D006829 ORTHO05D008742 8.0e-59 231.1 202 61.4
FAN06G1082 Fragaria x ananassa HOM05D006829 ORTHO05D008742 8.0e-59 231.1 204 61.3
MD01G1165000 Malus domestica HOM05D006829 ORTHO05D008742 2.3e-58 229.6 185 64.3
RcHm_v2.0_Chr1g0371991 Rosa chinensis HOM05D006829 ORTHO05D008742 3.0e-58 229.2 208 60.6
Oeu004091.1 Olea europaea HOM05D006829 ORTHO05D008742 4.0e-58 228.8 199 62.3
Oeu004092.1 Olea europaea HOM05D006829 ORTHO05D008742 4.0e-58 228.8 199 62.3
QL08p064642 Quercus lobata HOM05D006829 ORTHO05D008742 5.2e-58 228.4 216 59.7
TWI53G0389 Tripterygium wilfordii HOM05D006829 ORTHO05D008742 5.2e-58 228.4 214 56.1
Aqoxy4G02381_Aqoxy4G02382 Aquilegia oxysepala HOM05D006829 ORTHO05D008742 8.8e-58 227.6 202 56.4
FAN03G2028 Fragaria x ananassa HOM05D006829 ORTHO05D008742 8.8e-58 227.6 202 60.9
Gohir.D05G279500 Gossypium hirsutum HOM05D006829 ORTHO05D008742 1.5e-57 226.9 197 60.4
Gorai.009G293000 Gossypium raimondii HOM05D006829 ORTHO05D008742 1.5e-57 226.9 197 60.4
AUR62024915 Chenopodium quinoa HOM05D006829 ORTHO05D008742 2.0e-57 226.5 189 61.4
Thecc.10G183200 Theobroma cacao HOM05D006829 ORTHO05D008742 2.0e-57 226.5 215 58.6
EL10Ac2g02623 Beta vulgaris HOM05D006829 ORTHO05D008742 2.6e-57 226.1 192 63.0
AUR62030629 Chenopodium quinoa HOM05D006829 ORTHO05D008742 2.6e-57 226.1 188 61.2
Ciclev10031828m.g Citrus clementina HOM05D006829 ORTHO05D008742 3.4e-57 225.7 204 59.3
arahy.Tifrunner.gnm1.ann1.1M00W9 Arachis hypogaea HOM05D006829 ORTHO05D008742 4.4e-57 225.3 173 64.7
arahy.Tifrunner.gnm1.ann1.ST33QA Arachis hypogaea HOM05D006829 ORTHO05D008742 4.4e-57 225.3 177 63.8
Gohir.A05G277900 Gossypium hirsutum HOM05D006829 ORTHO05D008742 4.4e-57 225.3 214 58.9
Sabra13G0080500 Salix brachista HOM05D006829 ORTHO05D008742 4.4e-57 225.3 212 59.0
Nn5g26868 Nelumbo nucifera HOM05D006829 ORTHO05D008742 5.7e-57 224.9 166 67.5
PGR142G2558 Punica granatum HOM05D006829 ORTHO05D008742 7.5e-57 224.6 206 58.3
Manes.07G140300 Manihot esculenta HOM05D006829 ORTHO05D008742 9.8e-57 224.2 208 59.1
Cpa.g.sc19.69 Carica papaya HOM05D006829 ORTHO05D008742 1.3e-56 223.8 163 66.3
Potri.013G093500 Populus trichocarpa HOM05D006829 ORTHO05D008742 3.7e-56 222.2 212 58.0
Lsat_1_v5_gn_2_125021 Lactuca sativa HOM05D006829 ORTHO05D008742 6.3e-56 221.5 196 59.2
Carub.0005s2311 Capsella rubella HOM05D006829 ORTHO05D008742 8.3e-56 221.1 217 58.1
Atru.chr12.167 Acer truncatum HOM05D006829 ORTHO05D008742 1.8e-55 219.9 199 56.8
Actinidia33875 Actinidia chinensis HOM05D006829 ORTHO05D008742 1.8e-55 219.9 217 57.6
FAN10G0089 Fragaria x ananassa HOM05D006829 ORTHO05D008742 1.8e-55 219.9 209 57.4
FAN10G3521 Fragaria x ananassa HOM05D006829 ORTHO05D008742 1.8e-55 219.9 209 57.4
C08p31650 Brassica napus HOM05D006829 ORTHO05D008742 4.1e-55 218.8 211 57.3
BolC8t50786H Brassica oleracea HOM05D006829 ORTHO05D008742 4.1e-55 218.8 211 57.3
Thhalv10005995m.g Eutrema salsugineum HOM05D006829 ORTHO05D008742 4.1e-55 218.8 216 56.9
MBI03_g27103_MAGBIO Magnolia biondii HOM05D006829 ORTHO05D008742 4.1e-55 218.8 162 67.3
ECA238G4606 Erigeron canadensis HOM05D000486 ORTHO05D008742 5.4e-55 218.4 170 62.4
Migut.F00600 Erythranthe guttata HOM05D006829 ORTHO05D008742 7.0e-55 218.0 199 57.3
PSO017G4996 Papaver somniferum HOM05D006829 ORTHO05D008742 7.0e-55 218.0 167 60.5
AL5G37660 Arabidopsis lyrata HOM05D006829 ORTHO05D008742 9.1e-55 217.6 212 58.0
Sed0019807 Sechium edule HOM05D006829 ORTHO05D008742 9.1e-55 217.6 202 58.9
PGSC0003DMG401016632 Solanum tuberosum HOM05D006829 ORTHO05D008742 1.6e-54 216.9 170 62.9
HanXRQChr07g0203671 Helianthus annuus HOM05D006829 ORTHO05D008742 2.0e-54 216.5 194 59.3
vmacro06881 Vaccinium macrocarpon HOM05D006829 ORTHO05D008742 2.0e-54 216.5 247 51.8
A09p49290 Brassica napus HOM05D006829 ORTHO05D008742 2.7e-54 216.1 212 57.5
BraA09t40382Z Brassica rapa HOM05D006829 ORTHO05D008742 2.7e-54 216.1 212 57.5
Phvul.009G142000 Phaseolus vulgaris HOM05D006829 ORTHO05D008742 4.5e-54 215.3 167 64.1
Aa31LG10G11220 Aethionema arabicum HOM05D006829 ORTHO05D008742 5.9e-54 214.9 215 55.8
HPP92_013832 Vanilla planifolia HOM05D006829 ORTHO05D008742 7.7e-54 214.5 191 57.1
CARHR166480 Cardamine hirsuta HOM05D006829 ORTHO05D008742 1.3e-53 213.8 215 55.8
AT3G56330 Arabidopsis thaliana HOM05D006829 ORTHO05D008742 1.7e-53 213.4 215 56.7
Eucgr.G03129 Eucalyptus grandis HOM05D006829 ORTHO05D008742 2.2e-53 213.0 172 61.6
Sopen06g015460 Solanum pennellii HOM05D006829 ORTHO05D008742 2.9e-53 212.6 170 62.9
Sp5g06170 Schrenkiella parvula HOM05D006829 ORTHO05D008742 3.8e-53 212.2 214 56.1
Ca_16876_v3 Cicer arietinum L. HOM05D006829 ORTHO05D008742 6.5e-53 211.5 164 64.0
Glyma.06G144200 Glycine max HOM05D006829 ORTHO05D008742 6.5e-53 211.5 167 63.5
VMungo1309G2158 Vigna mungo HOM05D006829 ORTHO05D008742 8.5e-53 211.1 164 64.0
THA.LOC104824240 Tarenaya hassleriana HOM05D006829 ORTHO05D008742 1.9e-52 209.9 214 56.1
Lalb_Chr11g0067871 Lupinus albus HOM05D006829 ORTHO05D008742 2.5e-52 209.5 169 61.5
Nitab4.5_0004599g0030 Nicotiana tabacum HOM05D006829 ORTHO05D008742 4.2e-52 208.8 182 58.2
CDE06G0932 Ceratophyllum demersum HOM05D006829 ORTHO05D008742 7.2e-52 208.0 210 53.8
Rhsim03G0151300 Rhododendron simsii HOM05D006829 ORTHO05D008742 7.2e-52 208.0 261 48.3
Nitab4.5_0001743g0020 Nicotiana tabacum HOM05D006829 ORTHO05D008742 1.2e-51 207.2 181 58.0
Psat5g068000 Pisum sativum HOM05D006829 ORTHO05D008742 8.0e-51 204.5 164 61.0
Medtr3g094190 Medicago truncatula HOM05D006829 ORTHO05D008742 8.8e-50 201.1 161 62.7
Lj1g0006364 Lotus japonicus HOM05D006829 ORTHO05D008742 2.0e-49 199.9 178 59.0
TPR.G16111 Trifolium pratense HOM05D006829 ORTHO05D008742 3.4e-49 199.1 164 59.1
Pp3c22_6520 Physcomitrium patens HOM05D006829 ORTHO05D008742 5.6e-44 181.8 196 48.5
Dinv21837 Davidia involucrata HOM05D006829 ORTHO05D008742 1.6e-43 180.3 118 74.6
COL.COLO4_19445 Corchorus olitorius HOM05D006829 ORTHO05D008742 2.3e-42 176.4 154 60.4
Mapoly0122s0019 Marchantia polymorpha HOM05D006829 ORTHO05D008742 2.9e-40 169.5 166 48.8
SMO246G0016 Selaginella moellendorffii HOM05D006829 ORTHO05D008742 2.9e-40 169.5 190 47.9
ATR1127G148 Amborella trichopoda HOM05D006829 ORTHO05D008742 4.9e-40 168.7 280 37.1
GSVIVG01032697001 Vitis vinifera HOM05D006829 ORTHO05D008742 1.4e-39 167.2 117 68.4
unitig_37.g12471 Utricularia gibba HOM05D006829 ORTHO05D002567 5.4e-39 165.2 137 62.0
Zm00001eb285100 Zea mays HOM05D006829 ORTHO05D008742 1.2e-38 164.1 166 49.4
Os05g0324200 Oryza sativa ssp. japonica HOM05D006829 ORTHO05D008742 1.6e-38 163.7 162 51.2
CBR_g8316 Chara braunii HOM05D000601 ORTHO05D000407 4.4e-33 145.6 231 37.2
SEGI_12327 Sequoiadendron giganteum HOM05D006829 ORTHO05D008742 3.0e-29 132.9 166 45.2
TAR381G0177 Trochodendron aralioides HOM05D006829 ORTHO05D008742 5.8e-25 118.6 95 61.1
PRCOL_00004084 Prasinoderma coloniale HOM05D006829 ORTHO05D008742 3.2e-23 112.8 199 37.7
CAN.G24.7 Capsicum annuum HOM05D006829 ORTHO05D008742 1.5e-20 104.0 119 47.1
MCO02G392 Micromonas commoda HOM05D006829 ORTHO05D008742 1.5e-20 104.0 177 36.7
MD07G1232400 Malus domestica HOM05D006829 ORTHO05D008742 7.1e-15 85.1 56 71.4
Cre10.g428100 Chlamydomonas reinhardtii HOM05D006829 ORTHO05D008742 6.0e-14 82.0 66 51.5
Lj4g0017249 Lotus japonicus HOM05D006829 ORTHO05D008742 3.9e-13 79.3 49 71.4
PRCOL_00005295 Prasinoderma coloniale HOM05D003582 ORTHO05D004789 3.2e-07 59.7 127 33.1
MCO10G029 Micromonas commoda HOM05D003582 ORTHO05D004789 9.3e-07 58.2 116 31.0


User provided reference genes

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