Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014558 Daucus carota HOM05D001494 ORTHO05D001364 3.0e-67 258.5 136 100.0
Dinv29225 Davidia involucrata HOM05D001494 ORTHO05D001364 3.1e-24 115.5 139 57.6
Oeu055179.1 Olea europaea HOM05D001494 ORTHO05D001364 2.9e-22 109.0 137 54.7
Cc02_g00950 Coffea canephora HOM05D001494 ORTHO05D001364 1.8e-19 99.8 127 55.9
Hma1.2p1_0415F.1_g148100 Hydrangea macrophylla HOM05D001494 ORTHO05D001364 1.5e-18 96.7 138 54.3
MSTRG.26988 Avicennia marina HOM05D001494 ORTHO05D001364 1.3e-17 93.6 132 52.3
Oeu037967.1 Olea europaea HOM05D001494 ORTHO05D001364 8.2e-17 90.9 142 47.9
GSVIVG01038626001 Vitis vinifera HOM05D001494 ORTHO05D001364 1.4e-16 90.1 135 49.6
Lalb_Chr04g0254231 Lupinus albus HOM05D001494 ORTHO05D001364 2.0e-15 86.3 141 49.6
Sed0008028 Sechium edule HOM05D001494 ORTHO05D001364 7.2e-13 77.8 143 46.2
VMungo0331G1691 Vigna mungo HOM05D001494 ORTHO05D001364 7.2e-13 77.8 144 46.5
Nitab4.5_0000319g0250 Nicotiana tabacum HOM05D001494 ORTHO05D001364 9.4e-13 77.4 134 50.0
Medtr8g024650 Medicago truncatula HOM05D001494 ORTHO05D001364 7.9e-12 74.3 140 47.9
Gohir.A12G115700 Gossypium hirsutum HOM05D001494 ORTHO05D001364 1.4e-11 73.6 143 45.5
arahy.Tifrunner.gnm1.ann1.0T87WI Arachis hypogaea HOM05D001494 ORTHO05D001364 1.8e-11 73.2 148 46.6
arahy.Tifrunner.gnm1.ann1.T3QUTI Arachis hypogaea HOM05D001494 ORTHO05D001364 1.8e-11 73.2 148 46.6
CiPaw.01G080800 Carya illinoinensis HOM05D001494 ORTHO05D001364 2.3e-11 72.8 144 45.8
Ciclev10022233m.g Citrus clementina HOM05D001494 ORTHO05D001364 3.0e-11 72.4 131 46.6
Glyma.07G051300 Glycine max HOM05D001494 ORTHO05D001364 3.0e-11 72.4 132 47.7
Gohir.D12G119300 Gossypium hirsutum HOM05D001494 ORTHO05D001364 3.0e-11 72.4 141 45.4
ECA232G3238 Erigeron canadensis HOM05D001494 ORTHO05D001364 5.1e-11 71.6 135 46.7
Gohir.A12G115500 Gossypium hirsutum HOM05D001494 ORTHO05D001364 5.1e-11 71.6 131 47.3
Gorai.008G129300 Gossypium raimondii HOM05D001494 ORTHO05D001364 5.1e-11 71.6 141 45.4
unitig_52.g16864 Utricularia gibba HOM05D001494 ORTHO05D001364 5.1e-11 71.6 135 43.7
Glyma.16G020400 Glycine max HOM05D001494 ORTHO05D001364 1.1e-10 70.5 129 48.1
Gohir.D12G119100 Gossypium hirsutum HOM05D001494 ORTHO05D001364 1.1e-10 70.5 131 47.3
Gorai.008G129100 Gossypium raimondii HOM05D001494 ORTHO05D001364 1.1e-10 70.5 131 47.3
Thecc.01G335400 Theobroma cacao HOM05D001494 ORTHO05D001364 2.0e-10 69.7 148 47.3
Phvul.010G118100 Phaseolus vulgaris HOM05D001494 ORTHO05D001364 2.6e-10 69.3 131 45.8
SalBow2G0299 Salvia bowleyana HOM05D001494 ORTHO05D001364 2.6e-10 69.3 138 44.9
Actinidia08688 Actinidia chinensis HOM05D001494 ORTHO05D001364 3.3e-10 68.9 117 44.4
Duzib268G0406 Durio zibethinus HOM05D001494 ORTHO05D001364 3.3e-10 68.9 150 45.3
MSTRG.8541 Avicennia marina HOM05D001494 ORTHO05D001364 7.4e-10 67.8 129 40.3
Lj3g0005361 Lotus japonicus HOM05D001494 ORTHO05D001364 7.4e-10 67.8 131 47.3
Manes.05G018100 Manihot esculenta HOM05D001494 ORTHO05D001364 9.7e-10 67.4 142 45.8
TPR.G25262 Trifolium pratense HOM05D001494 ORTHO05D001364 9.7e-10 67.4 149 42.3
CiPaw.02G044200 Carya illinoinensis HOM05D001494 ORTHO05D001364 1.7e-09 66.6 147 45.6
Peaxi162Scf00767g00418 Petunia axillaris HOM05D001494 ORTHO05D001364 2.2e-09 66.2 141 45.4
Atru.chr5.747 Acer truncatum HOM05D001494 ORTHO05D001364 2.8e-09 65.9 147 42.9
Sabra14G0076400 Salix brachista HOM05D001494 ORTHO05D001364 2.8e-09 65.9 140 45.0
Nitab4.5_0001993g0030 Nicotiana tabacum HOM05D001494 ORTHO05D001364 3.7e-09 65.5 135 43.7
PGSC0003DMG400003212 Solanum tuberosum HOM05D001494 ORTHO05D001364 4.8e-09 65.1 130 43.8
Actinidia07997 Actinidia chinensis HOM05D001494 ORTHO05D001364 6.3e-09 64.7 134 44.8
CARHR001310 Cardamine hirsuta HOM05D001494 ORTHO05D001364 8.2e-09 64.3 139 38.8
Duzib138G1081 Durio zibethinus HOM05D001494 ORTHO05D001364 1.4e-08 63.5 146 42.5
RcHm_v2.0_Chr1g0360841 Rosa chinensis HOM05D001494 ORTHO05D001364 1.4e-08 63.5 127 40.2
FAN10G2837 Fragaria x ananassa HOM05D001494 ORTHO05D001364 2.4e-08 62.8 128 41.4
Lalb_Chr10g0100811 Lupinus albus HOM05D001494 ORTHO05D001364 2.4e-08 62.8 96 49.0
Potri.014G103900 Populus trichocarpa HOM05D001494 ORTHO05D001364 4.1e-08 62.0 140 44.3
TWI59G0773 Tripterygium wilfordii HOM05D001494 ORTHO05D001364 4.1e-08 62.0 115 43.5
Duzib133G0286 Durio zibethinus HOM05D001494 ORTHO05D001364 5.3e-08 61.6 136 47.8
Sc13g0010160 Simmondsia chinensis HOM05D001494 ORTHO05D001364 7.0e-08 61.2 136 43.4
Ca_23493_v3 Cicer arietinum L. HOM05D001494 ORTHO05D001364 1.2e-07 60.5 131 45.0
Ca_29945_v3 Cicer arietinum L. HOM05D001494 ORTHO05D001364 1.2e-07 60.5 131 45.0
HanXRQChr08g0225711 Helianthus annuus HOM05D001494 ORTHO05D001364 1.5e-07 60.1 144 43.1
vmacro12651 Vaccinium macrocarpon HOM05D001494 ORTHO05D001364 1.5e-07 60.1 148 45.3
EL10Ac1g00201 Beta vulgaris HOM05D001494 ORTHO05D001364 3.4e-07 58.9 153 41.2
Hma1.2p1_0180F.1_g079880 Hydrangea macrophylla HOM05D001494 ORTHO05D001364 3.4e-07 58.9 122 44.3
ClCG11G006560 Citrullus lanatus HOM05D001494 ORTHO05D001364 4.5e-07 58.5 119 46.2
Peaxi162Scf00542g00625 Petunia axillaris HOM05D001494 ORTHO05D001364 4.5e-07 58.5 138 39.9
Lalb_Chr17g0342941 Lupinus albus HOM05D001494 ORTHO05D001364 5.9e-07 58.2 127 44.9
Hund09701 Selenicereus undatus HOM05D001494 ORTHO05D001364 5.9e-07 58.2 136 42.6
Cc02_g39850 Coffea canephora HOM05D001494 ORTHO05D001364 7.7e-07 57.8 141 41.1
Haze_15714 Corylus avellana HOM05D001494 ORTHO05D001364 1.3e-06 57.0 153 41.2
AL1G11340 Arabidopsis lyrata HOM05D001494 ORTHO05D001364 1.7e-06 56.6 138 37.7
DCAR_008968 Daucus carota HOM05D001494 ORTHO05D176984 1.7e-06 56.6 99 41.4
Lsat_1_v5_gn_9_50160 Lactuca sativa HOM05D001494 ORTHO05D001364 1.7e-06 56.6 144 38.9
EL10Ac3g05200 Beta vulgaris HOM05D001494 ORTHO05D001364 2.9e-06 55.8 128 42.2
Cpa.g.sc141.17 Carica papaya HOM05D001494 ORTHO05D001364 2.9e-06 55.8 142 42.3
AUR62006021 Chenopodium quinoa HOM05D001494 ORTHO05D001364 2.9e-06 55.8 125 44.0
Solyc03g082480.4 Solanum lycopersicum HOM05D001494 ORTHO05D001364 2.9e-06 55.8 136 38.2
Sopen03g022210 Solanum pennellii HOM05D001494 ORTHO05D001364 2.9e-06 55.8 136 38.2
Carub.0001s0105 Capsella rubella HOM05D001494 ORTHO05D001364 5.0e-06 55.1 138 38.4
Potri.002G177600 Populus trichocarpa HOM05D001494 ORTHO05D001364 5.0e-06 55.1 146 43.2
A09p68940 Brassica napus HOM05D001494 ORTHO05D001364 6.5e-06 54.7 141 36.2
BraA09t42234Z Brassica rapa HOM05D001494 ORTHO05D001364 6.5e-06 54.7 141 36.2
CsaV3_6G001440 Cucumis sativus L. HOM05D001494 ORTHO05D001364 6.5e-06 54.7 150 40.7
Duzib068G0628 Durio zibethinus HOM05D001494 ORTHO05D001364 8.5e-06 54.3 122 37.7


User provided reference genes

Program Settings