Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014541 Daucus carota HOM05D006590 ORTHO05D008427 0.0e+00 1174.5 579 100.0
Actinidia08640 Actinidia chinensis HOM05D006590 ORTHO05D008427 7.0e-251 870.5 604 71.0
CSS0003993 Camellia sinensis var. sinensis HOM05D006590 ORTHO05D008427 5.9e-250 867.5 611 69.6
Prupe.2G311400 Prunus persica HOM05D006590 ORTHO05D008427 3.9e-249 864.8 609 69.6
CiPaw.05G251800 Carya illinoinensis HOM05D006590 ORTHO05D008427 4.3e-248 861.3 610 69.3
Haze_00189 Corylus avellana HOM05D006590 ORTHO05D008427 3.6e-247 858.2 609 69.1
GSVIVG01038710001 Vitis vinifera HOM05D006590 ORTHO05D008427 4.7e-247 857.8 609 69.8
Rhsim03G0207800 Rhododendron simsii HOM05D006590 ORTHO05D008427 1.0e-246 856.7 613 68.8
QL09p009505 Quercus lobata HOM05D006590 ORTHO05D008427 2.3e-246 855.5 594 70.2
vmacro06540 Vaccinium macrocarpon HOM05D006590 ORTHO05D008427 5.2e-246 854.4 613 68.7
Ciclev10004491m.g Citrus clementina HOM05D006590 ORTHO05D008427 2.0e-245 852.4 605 68.6
Dinv35324 Davidia involucrata HOM05D006590 ORTHO05D008427 2.6e-245 852.0 576 72.2
Cfa016251 Carpinus fangiana HOM05D006590 ORTHO05D008427 3.4e-245 851.7 610 68.5
FvH4_7g31750 Fragaria vesca HOM05D006590 ORTHO05D008427 1.9e-243 845.9 614 68.9
FAN06G3161 Fragaria x ananassa HOM05D006590 ORTHO05D008427 1.9e-243 845.9 614 68.9
HanXRQChr09g0250931 Helianthus annuus HOM05D006590 ORTHO05D008427 5.4e-243 844.3 614 67.6
FAN10G1373 Fragaria x ananassa HOM05D006590 ORTHO05D008427 7.0e-243 844.0 614 68.4
FAN06G3878 Fragaria x ananassa HOM05D006590 ORTHO05D008427 1.6e-242 842.8 614 68.7
FAN10G2802 Fragaria x ananassa HOM05D006590 ORTHO05D008427 1.6e-242 842.8 614 68.2
TWI14G0328 Tripterygium wilfordii HOM05D006590 ORTHO05D008427 3.5e-242 841.6 614 68.7
Manes.06G159700 Manihot esculenta HOM05D006590 ORTHO05D008427 1.3e-241 839.7 609 67.5
RcHm_v2.0_Chr1g0380971 Rosa chinensis HOM05D006590 ORTHO05D008427 1.3e-241 839.7 620 68.1
Hma1.2p1_0404F.1_g145500 Hydrangea macrophylla HOM05D006590 ORTHO05D008427 1.7e-241 839.3 587 69.3
FAN03G2401 Fragaria x ananassa HOM05D006590 ORTHO05D008427 6.6e-241 837.4 614 67.9
MD01G1219800 Malus domestica HOM05D006590 ORTHO05D008427 8.6e-241 837.0 610 68.4
ECA232G3273 Erigeron canadensis HOM05D006590 ORTHO05D008427 1.1e-240 836.6 612 67.5
Atru.chr1.163 Acer truncatum HOM05D006590 ORTHO05D008427 5.6e-240 834.3 614 66.4
Peaxi162Scf00550g00546 Petunia axillaris HOM05D006590 ORTHO05D008427 1.6e-239 832.8 590 68.0
FAN01G1498 Fragaria x ananassa HOM05D006590 ORTHO05D008427 2.1e-239 832.4 623 67.3
Migut.F00225 Erythranthe guttata HOM05D006590 ORTHO05D008427 4.7e-239 831.2 613 65.4
Potri.015G017100 Populus trichocarpa HOM05D006590 ORTHO05D008427 6.2e-239 830.9 585 70.4
Ca_16698_v3 Cicer arietinum L. HOM05D006590 ORTHO05D008427 4.0e-238 828.2 610 66.6
arahy.Tifrunner.gnm1.ann1.X012TI Arachis hypogaea HOM05D006590 ORTHO05D008427 1.2e-237 826.6 597 67.5
CANSAT21G0035 Cannabis sativa HOM05D006590 ORTHO05D008427 1.2e-237 826.6 605 66.4
Oeu041046.1 Olea europaea HOM05D006590 ORTHO05D008427 2.2e-236 822.4 610 66.7
PGR042G1173 Punica granatum HOM05D006590 ORTHO05D008427 2.9e-236 822.0 601 67.4
Eucgr.A01466 Eucalyptus grandis HOM05D006590 ORTHO05D008427 6.4e-236 820.8 605 66.1
Lalb_Chr08g0240321 Lupinus albus HOM05D006590 ORTHO05D008427 8.3e-236 820.5 611 65.8
Glyma.04G236600 Glycine max HOM05D006590 ORTHO05D008427 2.7e-234 815.5 602 65.8
Lj1g0007393 Lotus japonicus HOM05D006590 ORTHO05D008427 6.0e-234 814.3 609 65.2
Thecc.03G196200 Theobroma cacao HOM05D006590 ORTHO05D008427 6.0e-234 814.3 610 65.2
Duzib205G0486 Durio zibethinus HOM05D006590 ORTHO05D008427 7.8e-234 813.9 610 65.4
Glyma.06G127700 Glycine max HOM05D006590 ORTHO05D008427 7.8e-234 813.9 610 65.2
VMungo1309G0677 Vigna mungo HOM05D006590 ORTHO05D008427 1.0e-233 813.5 610 65.2
TPR.G17286 Trifolium pratense HOM05D006590 ORTHO05D008427 2.3e-233 812.4 612 64.7
CAN.G108.67 Capsicum annuum HOM05D006590 ORTHO05D008427 6.6e-233 810.8 614 64.7
Phvul.009G053500 Phaseolus vulgaris HOM05D006590 ORTHO05D008427 6.6e-233 810.8 608 65.5
Sopen03g023190 Solanum pennellii HOM05D006590 ORTHO05D008427 1.1e-232 810.1 612 64.2
arahy.Tifrunner.gnm1.ann1.ICGL65 Arachis hypogaea HOM05D006590 ORTHO05D008427 1.9e-232 809.3 613 65.6
Medtr3g091290 Medicago truncatula HOM05D006590 ORTHO05D008427 7.3e-232 807.4 608 64.5
Psat5g078080 Pisum sativum HOM05D006590 ORTHO05D008427 6.2e-231 804.3 610 63.8
PGSC0003DMG400009120 Solanum tuberosum HOM05D006590 ORTHO05D008427 8.1e-231 803.9 612 63.7
COL.COLO4_11262 Corchorus olitorius HOM05D006590 ORTHO05D008427 1.5e-229 799.7 638 63.2
Sc13g0009780 Simmondsia chinensis HOM05D006590 ORTHO05D008427 8.3e-228 793.9 616 64.1
Aqoxy5G04233 Aquilegia oxysepala HOM05D006590 ORTHO05D008427 2.4e-227 792.3 598 66.2
Gohir.D12G251400 Gossypium hirsutum HOM05D006590 ORTHO05D008427 5.4e-227 791.2 613 64.1
SalBow4G1653 Salvia bowleyana HOM05D006590 ORTHO05D008427 7.1e-227 790.8 611 64.3
Nn1g01869 Nelumbo nucifera HOM05D006590 ORTHO05D008427 1.0e-225 786.9 593 65.9
Gorai.008G269500 Gossypium raimondii HOM05D006590 ORTHO05D008427 1.3e-225 786.6 613 63.8
THA.LOC104800297 Tarenaya hassleriana HOM05D006590 ORTHO05D008427 3.0e-225 785.4 610 63.6
Gohir.A12G250600 Gossypium hirsutum HOM05D006590 ORTHO05D008427 3.9e-225 785.0 606 64.0
Nitab4.5_0007081g0010 Nicotiana tabacum HOM05D006590 ORTHO05D008427 1.1e-224 783.5 573 67.4
MELO3C008489.2 Cucumis melo HOM05D006590 ORTHO05D008427 1.9e-224 782.7 611 63.3
Cc02_g01670 Coffea canephora HOM05D006590 ORTHO05D008427 2.8e-223 778.9 581 65.2
TAR375G1022 Trochodendron aralioides HOM05D006590 ORTHO05D008427 3.6e-223 778.5 615 64.2
Sed0010238 Sechium edule HOM05D006590 ORTHO05D008427 6.2e-223 777.7 642 61.1
CsaV3_3G027870 Cucumis sativus L. HOM05D006590 ORTHO05D008427 5.2e-222 774.6 611 62.4
PSO063G2913 Papaver somniferum HOM05D006590 ORTHO05D008427 2.6e-221 772.3 606 63.0
PSO170G2823 Papaver somniferum HOM05D006590 ORTHO05D008427 5.8e-221 771.2 606 62.9
Nitab4.5_0000714g0140 Nicotiana tabacum HOM05D006590 ORTHO05D008427 1.2e-218 763.5 614 62.7
Thhalv10012882m.g Eutrema salsugineum HOM05D006590 ORTHO05D008427 4.6e-218 761.5 610 63.3
BolC9t57211H Brassica oleracea HOM05D006590 ORTHO05D008427 1.3e-217 760.0 608 64.1
Sp6g15580 Schrenkiella parvula HOM05D006590 ORTHO05D008427 1.7e-217 759.6 609 63.4
MBI07_g07100_MAGBIO Magnolia biondii HOM05D006590 ORTHO05D008427 3.0e-217 758.8 627 60.9
AUR62006110 Chenopodium quinoa HOM05D006590 ORTHO05D008427 5.1e-217 758.1 592 63.7
AUR62019378 Chenopodium quinoa HOM05D006590 ORTHO05D008427 8.7e-217 757.3 631 60.1
BraA10t43179Z Brassica rapa HOM05D006590 ORTHO05D008427 5.6e-216 754.6 613 63.5
AL8G28150 Arabidopsis lyrata HOM05D006590 ORTHO05D008427 1.1e-214 750.4 611 62.0
Carub.0008s1361 Capsella rubella HOM05D006590 ORTHO05D008427 2.4e-214 749.2 613 62.2
Aa31LG3G9610 Aethionema arabicum HOM05D006590 ORTHO05D008427 2.0e-213 746.1 611 62.2
CARHR266570 Cardamine hirsuta HOM05D006590 ORTHO05D008427 9.9e-213 743.8 612 62.7
C09p43300 Brassica napus HOM05D001108 ORTHO05D001619 6.2e-207 724.5 585 63.2
Potri.015G016801 Populus trichocarpa HOM05D006590 ORTHO05D008427 1.5e-205 719.9 533 69.6
Lsat_1_v5_gn_5_75160 Lactuca sativa HOM05D006590 ORTHO05D008427 2.0e-205 719.5 626 61.0
A10p10910 Brassica napus HOM05D001108 ORTHO05D001619 4.5e-205 718.4 590 62.5
SGA_v2.0_scaffold44G16790 Striga asiatica HOM05D006590 ORTHO05D008427 8.4e-204 714.1 590 60.8
CSS0014515 Camellia sinensis var. sinensis HOM05D006590 ORTHO05D008427 1.4e-198 696.8 473 71.2
BcaB08g35710 Brassica carinata HOM05D006590 ORTHO05D008427 4.5e-197 691.8 611 60.2
Os01g0655500 Oryza sativa ssp. japonica HOM05D006590 ORTHO05D008427 1.0e-196 690.6 588 57.5
EL10Ac3g05300 Beta vulgaris HOM05D006590 ORTHO05D008427 2.9e-196 689.1 592 59.6
HPP92_006416 Vanilla planifolia HOM05D006590 ORTHO05D008427 2.1e-194 682.9 592 57.3
unitig_899.g15485 Utricularia gibba HOM05D006590 ORTHO05D008427 2.4e-190 669.5 558 60.2
ATR0602G100 Amborella trichopoda HOM05D006590 ORTHO05D008427 5.8e-189 664.8 619 56.4
Hma1.2p1_0404F.1_g145510 Hydrangea macrophylla HOM05D006590 ORTHO05D008427 2.7e-186 656.0 409 75.1
Lj1C1015G5 Lonicera japonica HOM05D006590 ORTHO05D008427 2.7e-186 656.0 589 58.7
Solyc03g083420.4 Solanum lycopersicum HOM05D006590 ORTHO05D008427 2.2e-180 636.3 473 65.1
SEGI_37244 Sequoiadendron giganteum HOM05D006590 ORTHO05D008427 1.2e-178 630.6 599 55.1
Cpa.g.sc3.70 Carica papaya HOM05D006590 ORTHO05D008427 1.5e-176 623.6 575 57.0
Mapoly0022s0163 Marchantia polymorpha HOM05D006590 ORTHO05D008427 5.9e-149 531.9 591 46.4
SalBow4G1387 Salvia bowleyana HOM05D006590 ORTHO05D008427 1.0e-145 521.2 360 68.1
SMO172G0068 Selaginella moellendorffii HOM05D006590 ORTHO05D008427 4.1e-142 509.2 592 47.3
AT5G53450 Arabidopsis thaliana HOM05D006590 ORTHO05D008427 5.4e-142 508.8 400 65.5
ClCG05G008870 Citrullus lanatus HOM05D006590 ORTHO05D008427 7.5e-136 488.4 375 65.3
Zm00001eb158040 Zea mays HOM05D006590 ORTHO05D008427 2.3e-129 466.8 357 62.2
Potri.015G016500 Populus trichocarpa HOM05D006590 ORTHO05D008427 1.3e-84 318.2 325 52.3
CBR_g39728 Chara braunii HOM05D006590 ORTHO05D008427 2.7e-77 293.9 813 27.9
Sabra15G0013100 Salix brachista HOM05D006590 ORTHO05D008427 3.0e-76 290.4 252 63.1
Actinidia33527 Actinidia chinensis HOM05D006590 ORTHO05D008427 4.1e-73 280.0 344 47.7
Sabra15G0012800 Salix brachista HOM05D006590 ORTHO05D008427 9.1e-49 199.1 147 67.3
Potri.015G016300 Populus trichocarpa HOM05D006590 ORTHO05D008427 1.3e-39 168.7 134 64.2
Potri.015G016600 Populus trichocarpa HOM05D006590 ORTHO05D008427 1.6e-37 161.8 159 54.7
Potri.015G016375 Populus trichocarpa HOM05D006590 ORTHO05D008427 3.0e-28 131.0 71 85.9
Actinidia34212 Actinidia chinensis HOM05D006590 ORTHO05D008427 3.4e-27 127.5 73 78.1
BcaC04g19592 Brassica carinata HOM05D006590 ORTHO05D008427 3.1e-25 120.9 71 80.3
COL.COLO4_02893 Corchorus olitorius HOM05D006590 ORTHO05D008427 2.7e-24 117.9 61 88.5
Hma1.2p1_0404F.1_g145520 Hydrangea macrophylla HOM05D006590 ORTHO05D008427 7.5e-19 99.8 62 75.8
CDE10G1176 Ceratophyllum demersum HOM05D006590 ORTHO05D008427 7.0e-17 93.2 58 70.7
Lsat_1_v5_gn_2_64600 Lactuca sativa HOM05D006590 ORTHO05D011991 2.5e-14 84.7 54 70.4
Aqoxy2G01300 Aquilegia oxysepala HOM05D006590 ORTHO05D008427 5.8e-11 73.6 47 68.1
Cre02.g120250 Chlamydomonas reinhardtii HOM05D002406 ORTHO05D007964 3.7e-10 70.9 264 28.4
Hund04856 Selenicereus undatus HOM05D006590 ORTHO05D008427 6.4e-10 70.1 125 37.6
CDE09G1163 Ceratophyllum demersum HOM05D002406 ORTHO05D007964 2.4e-09 68.2 269 25.3
Pp3c4_25980 Physcomitrium patens HOM05D002406 ORTHO05D007964 3.2e-09 67.8 269 26.0
AagrBONN_evm.TU.Sc2ySwM_117.16 Anthoceros agrestis HOM05D002406 ORTHO05D007964 5.4e-09 67.0 256 23.4
Pp3c26_5140 Physcomitrium patens HOM05D002406 ORTHO05D007964 6.0e-08 63.5 270 25.2
Sabra10G0098600 Salix brachista HOM05D002406 ORTHO05D007964 1.0e-07 62.8 280 23.9
CsaV3_5G025330 Cucumis sativus L. HOM05D002406 ORTHO05D007964 1.7e-07 62.0 280 20.7
CAN.G37.10 Capsicum annuum HOM05D006590 ORTHO05D008427 2.3e-07 61.6 56 53.6
Mapoly0009s0197 Marchantia polymorpha HOM05D002406 ORTHO05D007964 3.0e-07 61.2 273 24.2
Manes.14G097700 Manihot esculenta HOM05D002406 ORTHO05D007964 5.0e-07 60.5 269 22.3
Sed0011685 Sechium edule HOM05D002406 ORTHO05D007964 5.0e-07 60.5 285 22.8
THA.LOC104808195 Tarenaya hassleriana HOM05D002406 ORTHO05D007964 5.0e-07 60.5 254 24.4
COL.COLO4_07869 Corchorus olitorius HOM05D002406 ORTHO05D007964 6.6e-07 60.1 280 21.4
CAN.G430.6 Capsicum annuum HOM05D002406 ORTHO05D007964 8.6e-07 59.7 265 22.3
CDE02G2223 Ceratophyllum demersum HOM05D002406 ORTHO05D007964 8.6e-07 59.7 270 24.4
Potri.008G116800 Populus trichocarpa HOM05D002406 ORTHO05D007964 8.6e-07 59.7 280 21.1
MELO3C002949.2 Cucumis melo HOM05D002406 ORTHO05D007964 1.1e-06 59.3 285 21.4
Oeu022120.1 Olea europaea HOM05D002406 ORTHO05D007964 1.5e-06 58.9 262 21.8
Thecc.02G360900 Theobroma cacao HOM05D002406 ORTHO05D007964 1.5e-06 58.9 285 21.8
TWI31G1069 Tripterygium wilfordii HOM05D002406 ORTHO05D007964 1.5e-06 58.9 295 22.0
CSS0033832 Camellia sinensis var. sinensis HOM05D002406 ORTHO05D007964 2.5e-06 58.2 285 22.1
CBR_g8256 Chara braunii HOM05D002406 ORTHO05D007964 2.5e-06 58.2 261 22.2
PRCOL_00001571 Prasinoderma coloniale HOM05D002406 ORTHO05D007964 2.5e-06 58.2 260 25.4
RcHm_v2.0_Chr4g0435821 Rosa chinensis HOM05D002406 ORTHO05D007964 2.5e-06 58.2 267 24.3
unitig_52.g17148 Utricularia gibba HOM05D002406 ORTHO05D007964 2.5e-06 58.2 254 22.8
ATR0681G159 Amborella trichopoda HOM05D002406 ORTHO05D007964 3.3e-06 57.8 280 21.4
FAN07G2527 Fragaria x ananassa HOM05D002406 ORTHO05D007964 3.3e-06 57.8 262 21.8
Sabra08G0088500 Salix brachista HOM05D002406 ORTHO05D007964 3.3e-06 57.8 287 23.3
SGA_v2.0_scaffold14G06823 Striga asiatica HOM05D002406 ORTHO05D007964 3.3e-06 57.8 262 21.8
Eucgr.G02347 Eucalyptus grandis HOM05D002406 ORTHO05D007964 4.3e-06 57.4 269 23.4
Nn3g17743 Nelumbo nucifera HOM05D002406 ORTHO05D007964 4.3e-06 57.4 205 24.4
Phvul.003G027300 Phaseolus vulgaris HOM05D002406 ORTHO05D007964 4.3e-06 57.4 269 23.4
SMO364G0095 Selaginella moellendorffii HOM05D002406 ORTHO05D007964 4.3e-06 57.4 254 22.4
BcaB03g15855 Brassica carinata HOM05D002406 ORTHO05D007964 5.6e-06 57.0 254 24.8
CiPaw.15G003700 Carya illinoinensis HOM05D002406 ORTHO05D007964 5.6e-06 57.0 280 21.4
Migut.K01266 Erythranthe guttata HOM05D002406 ORTHO05D007964 5.6e-06 57.0 280 21.4
PSO063G1488 Papaver somniferum HOM05D002406 ORTHO05D007964 5.6e-06 57.0 262 22.5
PSO782G1356 Papaver somniferum HOM05D002406 ORTHO05D007964 5.6e-06 57.0 262 22.5
Sp5g23940 Schrenkiella parvula HOM05D002406 ORTHO05D007964 5.6e-06 57.0 254 23.6
ClCG03G009900 Citrullus lanatus HOM05D002406 ORTHO05D007964 7.3e-06 56.6 263 21.3
Nitab4.5_0000597g0020 Nicotiana tabacum HOM05D002406 ORTHO05D007964 7.3e-06 56.6 254 22.0
Hund25103 Selenicereus undatus HOM05D002406 ORTHO05D007964 7.3e-06 56.6 270 20.4
Aa31LG8G10060 Aethionema arabicum HOM05D002406 ORTHO05D007964 9.5e-06 56.2 254 22.0
FvH4_4g28080 Fragaria vesca HOM05D002406 ORTHO05D007964 9.5e-06 56.2 262 21.8
FAN12G2143 Fragaria x ananassa HOM05D002406 ORTHO05D007964 9.5e-06 56.2 262 21.8
PGR119G0491 Punica granatum HOM05D002406 ORTHO05D007964 9.5e-06 56.2 272 22.1


User provided reference genes

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