Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014524 Daucus carota HOM05D007099 ORTHO05D009081 5.7e-78 294.3 159 100.0
Lj2P1221T100 Lonicera japonica HOM05D007099 ORTHO05D009081 2.8e-32 142.5 100 71.0
COL.COLO4_06718 Corchorus olitorius HOM05D007099 ORTHO05D009081 3.6e-32 142.1 103 68.9
Aqoxy12s037 Aquilegia oxysepala HOM05D007099 ORTHO05D009081 3.1e-31 139.0 100 68.0
THA.LOC104825605 Tarenaya hassleriana HOM05D007099 ORTHO05D009081 3.1e-31 139.0 103 68.0
Rhsim11G0096700 Rhododendron simsii HOM05D007099 ORTHO05D009081 4.0e-31 138.7 161 50.3
Nitab4.5_0000068g0330 Nicotiana tabacum HOM05D007099 ORTHO05D009081 5.2e-31 138.3 96 72.9
Nitab4.5_0012613g0010 Nicotiana tabacum HOM05D007099 ORTHO05D009081 5.2e-31 138.3 96 72.9
Ciclev10022860m.g Citrus clementina HOM05D007099 ORTHO05D009081 8.9e-31 137.5 103 68.9
Zm00001eb261270 Zea mays HOM05D002252 ORTHO05D002451 8.9e-31 137.5 115 62.6
EL10Ac3g05283 Beta vulgaris HOM05D007099 ORTHO05D009081 1.2e-30 137.1 130 60.0
BolC4t27852H Brassica oleracea HOM05D007099 ORTHO05D009081 1.2e-30 137.1 123 60.2
CARHR128610 Cardamine hirsuta HOM05D007099 ORTHO05D009081 1.5e-30 136.7 128 57.0
Aa31LG1G28210 Aethionema arabicum HOM05D007099 ORTHO05D009081 3.4e-30 135.6 112 63.4
BcaB06g28779 Brassica carinata HOM05D007099 ORTHO05D009081 3.4e-30 135.6 158 49.4
Carub.0004s1619 Capsella rubella HOM05D007099 ORTHO05D009081 3.4e-30 135.6 117 60.7
CAN.G371.64 Capsicum annuum HOM05D007099 ORTHO05D009081 3.4e-30 135.6 97 71.1
Hund07474 Selenicereus undatus HOM05D007099 ORTHO05D009081 4.4e-30 135.2 103 68.0
AT2G34520 Arabidopsis thaliana HOM05D007099 ORTHO05D009081 5.8e-30 134.8 117 59.8
Lalb_Chr00c21g0405211 Lupinus albus HOM05D007099 ORTHO05D009081 5.8e-30 134.8 100 68.0
Lalb_Chr00c21g0405401 Lupinus albus HOM05D007099 ORTHO05D009081 5.8e-30 134.8 100 68.0
Lalb_Chr00c24g0407161 Lupinus albus HOM05D007099 ORTHO05D009081 5.8e-30 134.8 100 68.0
CiPaw.13G036200 Carya illinoinensis HOM05D007099 ORTHO05D009081 9.9e-30 134.0 99 65.7
Hund03588 Selenicereus undatus HOM05D007099 ORTHO05D009081 9.9e-30 134.0 100 67.0
BcaB02g09535 Brassica carinata HOM05D007099 ORTHO05D009081 1.3e-29 133.7 130 56.2
A05p11160 Brassica napus HOM05D007099 ORTHO05D009081 1.7e-29 133.3 122 59.0
BraA05t20062Z Brassica rapa HOM05D007099 ORTHO05D009081 1.7e-29 133.3 122 59.0
Cc11_g04750 Coffea canephora HOM05D007099 ORTHO05D009081 1.7e-29 133.3 106 60.4
Lsat_1_v5_gn_9_15021 Lactuca sativa HOM05D007099 ORTHO05D009081 1.7e-29 133.3 100 69.0
AL4G30490 Arabidopsis lyrata HOM05D007099 ORTHO05D009081 2.2e-29 132.9 145 52.4
Solyc04g079380.1 Solanum lycopersicum HOM05D007099 ORTHO05D009081 2.2e-29 132.9 97 69.1
Sopen04g032990 Solanum pennellii HOM05D007099 ORTHO05D009081 2.2e-29 132.9 97 69.1
PGSC0003DMG400007997 Solanum tuberosum HOM05D007099 ORTHO05D009081 2.2e-29 132.9 97 69.1
VMungo0647G1684 Vigna mungo HOM05D007099 ORTHO05D009081 2.2e-29 132.9 100 67.0
MD07G1070600 Malus domestica HOM05D007099 ORTHO05D009081 2.9e-29 132.5 103 65.0
Atru.chr1.3070 Acer truncatum HOM05D007099 ORTHO05D009081 3.7e-29 132.1 103 64.1
Atru.chr3.1047 Acer truncatum HOM05D007099 ORTHO05D009081 3.7e-29 132.1 103 64.1
A04p26440 Brassica napus HOM05D007099 ORTHO05D009081 3.7e-29 132.1 157 48.4
BraA04t18148Z Brassica rapa HOM05D007099 ORTHO05D009081 3.7e-29 132.1 157 48.4
MD07G1069700 Malus domestica HOM05D007099 ORTHO05D009081 3.7e-29 132.1 102 64.7
Sp4g16780 Schrenkiella parvula HOM05D007099 ORTHO05D009081 3.7e-29 132.1 131 56.5
C04p63850 Brassica napus HOM05D007099 ORTHO05D009081 4.9e-29 131.7 157 48.4
CANSAT56G2898 Cannabis sativa HOM05D007099 ORTHO05D009081 4.9e-29 131.7 99 66.7
Prupe.2G087000 Prunus persica HOM05D007099 ORTHO05D009081 4.9e-29 131.7 103 64.1
Prupe.2G087700 Prunus persica HOM05D007099 ORTHO05D009081 4.9e-29 131.7 103 64.1
Prupe.8G094900 Prunus persica HOM05D007099 ORTHO05D009081 4.9e-29 131.7 103 64.1
MD03G1252400 Malus domestica HOM05D007099 ORTHO05D009081 6.4e-29 131.3 103 65.0
HanXRQChr10g0308131 Helianthus annuus HOM05D007099 ORTHO05D009081 8.4e-29 131.0 100 66.0
Sed0026927 Sechium edule HOM05D007099 ORTHO05D009081 8.4e-29 131.0 101 64.4
Thhalv10017324m.g Eutrema salsugineum HOM05D007099 ORTHO05D009081 1.1e-28 130.6 122 56.6
ClCG08G008070 Citrullus lanatus HOM05D007099 ORTHO05D009081 1.4e-28 130.2 101 63.4
BcaC02g11514 Brassica carinata HOM05D007099 ORTHO05D009081 1.9e-28 129.8 157 49.0
C04p14510 Brassica napus HOM05D007099 ORTHO05D009081 1.9e-28 129.8 157 49.0
BolC4t23034H Brassica oleracea HOM05D007099 ORTHO05D009081 1.9e-28 129.8 157 49.0
QL04p041158 Quercus lobata HOM05D007099 ORTHO05D009081 3.2e-28 129.0 98 63.3
MELO3C019879.2 Cucumis melo HOM05D007099 ORTHO05D009081 4.1e-28 128.6 101 62.4
Potri.001G424950 Populus trichocarpa HOM05D007099 ORTHO05D009081 4.1e-28 128.6 99 66.7
SalBow8G2603 Salvia bowleyana HOM05D007099 ORTHO05D009081 4.1e-28 128.6 97 67.0
AUR62006089 Chenopodium quinoa HOM05D007099 ORTHO05D009081 1.2e-27 127.1 144 50.7
Glyma.05G091932 Glycine max HOM05D007099 ORTHO05D009081 1.6e-27 126.7 122 56.6
CsaV3_2G032930 Cucumis sativus L. HOM05D007099 ORTHO05D009081 2.1e-27 126.3 101 62.4
AUR62019404 Chenopodium quinoa HOM05D007099 ORTHO05D009081 3.5e-27 125.6 144 50.7
QL10p027581 Quercus lobata HOM05D007099 ORTHO05D009081 3.5e-27 125.6 98 61.2
PSO541G4216 Papaver somniferum HOM05D007099 ORTHO05D009081 6.0e-27 124.8 99 64.6
Cfa011223 Carpinus fangiana HOM05D007099 ORTHO05D009081 7.8e-27 124.4 102 60.8
Cfa011224 Carpinus fangiana HOM05D007099 ORTHO05D009081 7.8e-27 124.4 113 56.6
Gorai.001G161900 Gossypium raimondii HOM05D007099 ORTHO05D009081 7.8e-27 124.4 87 72.4
PSO541G5582 Papaver somniferum HOM05D007099 ORTHO05D009081 7.8e-27 124.4 99 64.6
Sabra16G0287600 Salix brachista HOM05D007099 ORTHO05D009081 1.0e-26 124.0 99 63.6
PSO675G8234 Papaver somniferum HOM05D007099 ORTHO05D009081 1.3e-26 123.6 99 63.6
Haze_02608 Corylus avellana HOM05D007099 ORTHO05D009081 2.3e-26 122.9 102 60.8
FAN06G3861 Fragaria x ananassa HOM05D007099 ORTHO05D009081 5.1e-26 121.7 102 61.8
FAN10G1031 Fragaria x ananassa HOM05D007099 ORTHO05D009081 5.1e-26 121.7 102 61.8
Peaxi162Scf01092g00115 Petunia axillaris HOM05D007099 ORTHO05D009081 5.1e-26 121.7 88 70.5
RcHm_v2.0_Chr1g0333591 Rosa chinensis HOM05D007099 ORTHO05D009081 6.6e-26 121.3 103 61.2
arahy.Tifrunner.gnm1.ann1.5L8EUV Arachis hypogaea HOM05D007099 ORTHO05D009081 1.5e-25 120.2 101 63.4
ATR0573G002 Amborella trichopoda HOM05D007099 ORTHO05D009081 1.9e-25 119.8 114 54.4
FvH4_7g06080 Fragaria vesca HOM05D007099 ORTHO05D009081 1.9e-25 119.8 103 61.2
FAN16G1526 Fragaria x ananassa HOM05D007099 ORTHO05D009081 2.5e-25 119.4 102 59.8
PSO675G5170 Papaver somniferum HOM05D007099 ORTHO05D009081 2.5e-25 119.4 99 64.6
Manes.15G073400 Manihot esculenta HOM05D007099 ORTHO05D009081 4.3e-25 118.6 103 59.2
RcHm_v2.0_Chr5g0056441 Rosa chinensis HOM05D007099 ORTHO05D009081 4.3e-25 118.6 103 60.2
SHI18971 Sapria himalayana HOM05D007099 ORTHO05D009081 9.6e-25 117.5 99 62.6
BcaB02g09534 Brassica carinata HOM05D007099 ORTHO05D009081 1.6e-24 116.7 147 48.3
ECA234G1703 Erigeron canadensis HOM05D007099 ORTHO05D009081 1.6e-24 116.7 100 61.0
Ah.07g205590 Amaranthus hybridus HOM05D007099 ORTHO05D009081 2.1e-24 116.3 164 46.3
CDE02G2259 Ceratophyllum demersum HOM05D002864 ORTHO05D007972 1.8e-23 113.2 94 60.6
TPR.G27292 Trifolium pratense HOM05D007099 ORTHO05D009081 2.4e-23 112.8 87 64.4
arahy.Tifrunner.gnm1.ann1.N1QJ6Q Arachis hypogaea HOM05D007099 ORTHO05D009081 8.9e-23 110.9 100 58.0
FAN12G2091 Fragaria x ananassa HOM05D007099 ORTHO05D009081 5.8e-22 108.2 92 60.9
FvH4_3g30490 Fragaria vesca HOM05D007099 ORTHO05D009081 2.3e-18 96.3 86 58.1
FAN11G0918 Fragaria x ananassa HOM05D007099 ORTHO05D009081 2.3e-18 96.3 86 58.1
Solyc00g500363.1 Solanum lycopersicum HOM05D007099 ORTHO05D009081 1.5e-17 93.6 100 49.0
Nn1g10177 Nelumbo nucifera HOM05D007099 ORTHO05D009081 8.1e-16 87.8 63 65.1
Gohir.A01G126800 Gossypium hirsutum HOM05D007099 ORTHO05D009081 1.1e-15 87.4 90 54.4
SMO134G0293 Selaginella moellendorffii HOM05D007099 ORTHO05D009081 1.8e-15 86.7 95 48.4
ClCG01G010070 Citrullus lanatus HOM05D007099 ORTHO05D009081 9.0e-15 84.3 71 59.2
Peaxi162Scf36888g00001 Petunia axillaris HOM05D002864 ORTHO05D008485 9.0e-15 84.3 70 64.3
arahy.Tifrunner.gnm1.ann1.BT1F12 Arachis hypogaea HOM05D007099 ORTHO05D009081 2.6e-14 82.8 75 56.0
Thhalv10001274m.g Eutrema salsugineum HOM05D002864 ORTHO05D008485 4.4e-14 82.0 73 56.2
Lalb_Chr11g0070131 Lupinus albus HOM05D007099 ORTHO05D009081 7.6e-14 81.3 63 61.9
Lalb_Chr11g0070211 Lupinus albus HOM05D007099 ORTHO05D009081 7.6e-14 81.3 63 61.9
arahy.Tifrunner.gnm1.ann1.HLYH4Q Arachis hypogaea HOM05D007099 ORTHO05D009081 1.4e-12 77.0 63 61.9
Cre17.g726300 Chlamydomonas reinhardtii HOM05D007099 ORTHO05D009081 2.4e-12 76.3 97 43.3
Solyc09g050030.1 Solanum lycopersicum HOM05D007099 ORTHO05D009081 4.2e-12 75.5 63 55.6
Nitab4.5_0000120g0100 Nicotiana tabacum HOM05D002864 ORTHO05D008485 5.4e-12 75.1 61 63.9
Mapoly0991s0001 Marchantia polymorpha HOM05D007099 ORTHO05D009081 9.3e-12 74.3 62 54.8
Atru.chr6.1811 Acer truncatum HOM05D002864 ORTHO05D008485 3.5e-11 72.4 56 64.3
Nitab4.5_0004300g0130 Nicotiana tabacum HOM05D002864 ORTHO05D007972 3.5e-11 72.4 54 70.4
Nitab4.5_0000033g0070 Nicotiana tabacum HOM05D007099 ORTHO05D009081 3.0e-10 69.3 45 77.8
Rhsim10G0009600 Rhododendron simsii HOM05D000071 ORTHO05D000029 3.9e-10 68.9 61 55.7
GSVIVG01018700001 Vitis vinifera HOM05D007099 ORTHO05D009081 4.8e-08 62.0 79 49.4
Lalb_Chr00c21g0405241 Lupinus albus HOM05D007099 ORTHO05D009081 6.2e-08 61.6 39 79.5
Pp3c2_23460 Physcomitrium patens HOM05D007099 ORTHO05D009081 1.4e-07 60.5 49 51.0
SEGI_01256 Sequoiadendron giganteum HOM05D000388 ORTHO05D009843 3.4e-06 55.8 95 38.9


User provided reference genes

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