Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014334 Daucus carota HOM05D007927 ORTHO05D010029 1.0e-118 430.3 244 100.0
TAR628G1503 Trochodendron aralioides HOM05D007927 ORTHO05D010029 1.3e-76 290.4 247 66.8
Lj4A837T13 Lonicera japonica HOM05D007927 ORTHO05D010029 1.8e-75 286.6 254 63.8
Dinv07117 Davidia involucrata HOM05D007927 ORTHO05D010029 5.3e-75 285.0 259 63.3
Hma1.2p1_0476F.1_g160770 Hydrangea macrophylla HOM05D007927 ORTHO05D010029 1.3e-73 280.4 244 64.8
Lsat_1_v5_gn_5_69000 Lactuca sativa HOM05D007927 ORTHO05D010029 1.4e-72 276.9 251 61.0
Dinv24372 Davidia involucrata HOM05D007927 ORTHO05D010029 4.2e-72 275.4 244 63.9
Rhsim08G0002700 Rhododendron simsii HOM05D007927 ORTHO05D010029 9.4e-72 274.2 244 63.9
CSS0028810 Camellia sinensis var. sinensis HOM05D007927 ORTHO05D010029 4.7e-71 271.9 244 65.2
GSVIVG01026475001 Vitis vinifera HOM05D007927 ORTHO05D010029 2.3e-70 269.6 159 84.9
Actinidia01389 Actinidia chinensis HOM05D007927 ORTHO05D010029 3.9e-70 268.9 185 77.3
CiPaw.04G081700 Carya illinoinensis HOM05D007927 ORTHO05D010029 3.3e-69 265.8 254 59.8
Manes.13G085601 Manihot esculenta HOM05D007927 ORTHO05D010029 5.7e-69 265.0 174 77.6
VMungo0251G0724 Vigna mungo HOM05D007927 ORTHO05D010029 2.2e-68 263.1 256 58.6
vmacro18670 Vaccinium macrocarpon HOM05D007927 ORTHO05D010029 2.8e-68 262.7 245 62.4
Aqoxy5G02324 Aquilegia oxysepala HOM05D007927 ORTHO05D010029 4.8e-68 261.9 187 72.2
HanXRQChr12g0380561 Helianthus annuus HOM05D007927 ORTHO05D010029 8.2e-68 261.2 186 73.1
MBI03_g37385_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 8.2e-68 261.2 185 73.0
MBI03_g42544_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 8.2e-68 261.2 185 73.0
PGR102G3035 Punica granatum HOM05D007927 ORTHO05D010029 1.1e-67 260.8 249 59.0
Atru.chr4.915 Acer truncatum HOM05D007927 ORTHO05D010029 1.4e-67 260.4 249 60.2
Phvul.002G272300 Phaseolus vulgaris HOM05D007927 ORTHO05D010029 1.8e-67 260.0 260 57.3
QL10p043457 Quercus lobata HOM05D007927 ORTHO05D010029 1.8e-67 260.0 260 58.1
CsaV3_2G019410 Cucumis sativus L. HOM05D007927 ORTHO05D010029 1.2e-66 257.3 192 69.8
Eucgr.J01289 Eucalyptus grandis HOM05D007927 ORTHO05D010029 1.2e-66 257.3 159 81.8
Gohir.D09G003800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.5e-66 256.9 256 59.0
ATR0584G243 Amborella trichopoda HOM05D007927 ORTHO05D010029 2.6e-66 256.1 187 69.0
Glyma.05G191900 Glycine max HOM05D007927 ORTHO05D010029 2.6e-66 256.1 259 57.1
Gohir.A09G004300 Gossypium hirsutum HOM05D007927 ORTHO05D010029 3.4e-66 255.8 257 59.1
Nn1g06275 Nelumbo nucifera HOM05D007927 ORTHO05D010029 4.5e-66 255.4 186 72.0
Lj4g0020524 Lotus japonicus HOM05D007927 ORTHO05D010029 5.9e-66 255.0 240 62.5
ECA233G3055 Erigeron canadensis HOM05D007927 ORTHO05D010029 7.7e-66 254.6 238 60.9
Psat7g045960 Pisum sativum HOM05D007927 ORTHO05D010029 7.7e-66 254.6 245 61.2
Thecc.01G133600 Theobroma cacao HOM05D007927 ORTHO05D010029 7.7e-66 254.6 260 57.7
Ca_17635_v3 Cicer arietinum L. HOM05D007927 ORTHO05D010029 1.0e-65 254.2 155 81.9
COL.COLO4_35756 Corchorus olitorius HOM05D007927 ORTHO05D010029 1.0e-65 254.2 258 58.5
Duzib264G0901 Durio zibethinus HOM05D007927 ORTHO05D010029 1.0e-65 254.2 267 56.9
FAN28G0845 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.0e-65 254.2 189 68.3
MD01G1005400 Malus domestica HOM05D007927 ORTHO05D010029 1.3e-65 253.8 199 65.8
Medtr8g093750 Medicago truncatula HOM05D007927 ORTHO05D010029 1.3e-65 253.8 189 69.8
Prupe.4G271700 Prunus persica HOM05D007927 ORTHO05D010029 1.7e-65 253.4 260 56.2
RcHm_v2.0_Chr2g0121541 Rosa chinensis HOM05D007927 ORTHO05D010029 1.7e-65 253.4 188 68.1
CDE02G1961 Ceratophyllum demersum HOM05D007927 ORTHO05D010029 2.2e-65 253.1 188 70.2
FvH4_1g24440 Fragaria vesca HOM05D007927 ORTHO05D010029 2.9e-65 252.7 189 67.7
FAN19G2953 Fragaria x ananassa HOM05D007927 ORTHO05D010029 2.9e-65 252.7 189 67.7
Potri.005G063600 Populus trichocarpa HOM05D007927 ORTHO05D010029 2.9e-65 252.7 174 74.1
TPR.G37352 Trifolium pratense HOM05D007927 ORTHO05D010029 2.9e-65 252.7 189 69.8
ClCG02G000450 Citrullus lanatus HOM05D007927 ORTHO05D010029 7.2e-64 248.1 188 69.1
Ciclev10002360m.g Citrus clementina HOM05D007927 ORTHO05D010029 7.2e-64 248.1 252 58.3
Lalb_Chr07g0184391 Lupinus albus HOM05D007927 ORTHO05D010029 2.1e-63 246.5 189 68.3
TWI75G1488 Tripterygium wilfordii HOM05D007927 ORTHO05D010029 2.7e-63 246.1 188 69.1
Cfa002902 Carpinus fangiana HOM05D007927 ORTHO05D001116 1.0e-62 244.2 155 79.4
Cpa.g.sc42.162 Carica papaya HOM05D007927 ORTHO05D010029 3.3e-61 239.2 186 66.1
Haze_25255 Corylus avellana HOM05D007927 ORTHO05D010029 7.4e-61 238.0 204 65.2
Gorai.006G005200 Gossypium raimondii HOM05D007927 ORTHO05D010029 7.4e-61 238.0 248 56.5
FAN23G1573 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.7e-60 236.9 178 66.9
FAN26G1905 Fragaria x ananassa HOM05D007927 ORTHO05D010029 2.0e-58 229.9 241 53.5
SEGI_35752 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 3.5e-58 229.2 183 63.4
Os12g0189700 Oryza sativa ssp. japonica HOM05D007927 ORTHO05D010029 2.9e-57 226.1 159 70.4
MELO3C023232.2 Cucumis melo HOM05D007927 ORTHO05D010029 2.6e-53 213.0 168 67.3
AagrBONN_evm.TU.Sc2ySwM_344.4939 Anthoceros agrestis HOM05D007927 ORTHO05D010029 2.8e-52 209.5 155 67.1
Pp3c24_20210 Physcomitrium patens HOM05D007927 ORTHO05D010029 2.7e-50 203.0 156 64.7
Lj4C838G8 Lonicera japonica HOM05D007927 ORTHO05D010029 2.8e-44 183.0 254 46.9
Mapoly0115s0058 Marchantia polymorpha HOM05D007927 ORTHO05D010029 1.8e-43 180.3 176 54.5
Sabra07G0086100 Salix brachista HOM05D007927 ORTHO05D010029 7.7e-42 174.9 98 83.7
Sabra05G0052800 Salix brachista HOM05D007927 ORTHO05D010029 5.4e-35 152.1 170 51.2
SEGI_09554 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 3.6e-31 139.4 89 78.7
FAN19G2631 Fragaria x ananassa HOM05D007927 ORTHO05D010029 7.8e-26 121.7 135 51.1
FAN23G0137 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.5e-24 117.5 134 48.5
Cre01.g055151 Chlamydomonas reinhardtii HOM05D007927 ORTHO05D010029 4.6e-18 95.9 135 37.8
Gohir.D01G107700 Gossypium hirsutum HOM05D005170 ORTHO05D010029 6.2e-15 85.5 118 44.1
Gohir.D06G120200 Gossypium hirsutum HOM05D005170 ORTHO05D010029 1.8e-14 84.0 118 43.2
Gohir.D03G074800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 3.1e-14 83.2 46 87.0
Gorai.010G138300 Gossypium raimondii HOM05D007927 ORTHO05D010029 4.0e-14 82.8 48 81.2
Gohir.D09G047700 Gossypium hirsutum HOM05D007927 ORTHO05D010029 3.4e-13 79.7 47 80.9
Gorai.009G413100 Gossypium raimondii HOM05D007927 ORTHO05D010029 9.9e-13 78.2 86 54.7
FvH4_1g24060 Fragaria vesca HOM05D007927 ORTHO05D010029 6.4e-12 75.5 48 72.9
Gohir.D04G109100 Gossypium hirsutum HOM05D007927 ORTHO05D010029 4.1e-11 72.8 86 53.5
Sabra07G0086200 Salix brachista HOM05D007927 ORTHO05D010029 9.2e-11 71.6 141 38.3
Pp3c2_6800 Physcomitrium patens HOM05D019817 ORTHO05D016515 1.6e-07 60.8 118 31.4
SEGI_14611 Sequoiadendron giganteum HOM05D019817 ORTHO05D016515 2.8e-07 60.1 94 34.0
Mapoly0178s0020 Marchantia polymorpha HOM05D019817 ORTHO05D016515 3.6e-07 59.7 117 34.2
Gohir.D11G266900 Gossypium hirsutum HOM05D005170 ORTHO05D006985 3.1e-06 56.6 29 93.1


User provided reference genes

Program Settings