Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014203 Daucus carota HOM05D013332 ORTHO05D004477 2.7e-61 238.8 151 100.0
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 7.7e-16 87.8 145 35.9
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 3.2e-14 82.4 142 39.4
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 3.6e-13 79.0 145 37.9
Peaxi162Scf00237g00201 Petunia axillaris HOM05D008176 ORTHO05D004477 6.1e-13 78.2 144 37.5
Nn1g05455 Nelumbo nucifera HOM05D008046 ORTHO05D004477 1.4e-12 77.0 149 45.6
Sopen05g029890 Solanum pennellii HOM05D008176 ORTHO05D004477 2.3e-12 76.3 132 38.6
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 5.2e-12 75.1 144 48.6
PGSC0003DMG400016149 Solanum tuberosum HOM05D008176 ORTHO05D004477 8.8e-12 74.3 143 34.3
Hma1.2p1_0019F.1_g013800 Hydrangea macrophylla HOM05D013332 ORTHO05D004477 1.2e-11 73.9 169 40.8
QL06p048130 Quercus lobata HOM05D008176 ORTHO05D004477 1.2e-11 73.9 148 31.8
Solyc11g010250.1 Solanum lycopersicum HOM05D008176 ORTHO05D004477 1.2e-11 73.9 146 36.3
PGSC0003DMG400016792 Solanum tuberosum HOM05D008176 ORTHO05D004477 2.6e-11 72.8 129 41.9
Nitab4.5_0012818g0010 Nicotiana tabacum HOM05D008176 ORTHO05D004477 3.3e-11 72.4 137 40.9
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 4.4e-11 72.0 141 41.1
Gohir.A02G129700 Gossypium hirsutum HOM05D008176 ORTHO05D004477 1.3e-10 70.5 142 35.9
CiPaw.03G145800 Carya illinoinensis HOM05D008176 ORTHO05D004477 6.3e-10 68.2 153 35.3
Gohir.D03G040500 Gossypium hirsutum HOM05D008176 ORTHO05D004477 6.3e-10 68.2 142 33.1
Gorai.003G041400 Gossypium raimondii HOM05D008176 ORTHO05D004477 6.3e-10 68.2 142 33.1
PGSC0003DMG400016791 Solanum tuberosum HOM05D008176 ORTHO05D004477 1.1e-09 67.4 127 44.1
Phvul.002G260800 Phaseolus vulgaris HOM05D008176 ORTHO05D004477 1.4e-09 67.0 136 33.8
COL.COLO4_27295 Corchorus olitorius HOM05D008176 ORTHO05D004477 4.1e-09 65.5 156 30.8
Nitab4.5_0000128g0240 Nicotiana tabacum HOM05D008176 ORTHO05D004477 5.3e-09 65.1 130 36.2
Cpa.g.sc55.74 Carica papaya HOM05D008176 ORTHO05D004477 7.0e-09 64.7 155 42.6
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 7.0e-09 64.7 157 33.8
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 7.0e-09 64.7 141 39.0
Ah.02g126210 Amaranthus hybridus HOM05D031888 ORTHO05D004477 9.1e-09 64.3 179 34.1
Dinv13234 Davidia involucrata HOM05D008176 ORTHO05D004477 9.1e-09 64.3 129 42.6
Thecc.01G095600 Theobroma cacao HOM05D008176 ORTHO05D004477 1.2e-08 63.9 150 32.7
Oeu048965.1 Olea europaea HOM05D008046 ORTHO05D004477 4.5e-08 62.0 145 39.3
Ca_08988_v3 Cicer arietinum L. HOM05D008176 ORTHO05D004477 7.7e-08 61.2 147 28.6
FAN26G3011 Fragaria x ananassa HOM05D013332 ORTHO05D004477 7.7e-08 61.2 172 34.3
FAN28G1274 Fragaria x ananassa HOM05D013332 ORTHO05D004477 7.7e-08 61.2 172 34.3
Sopen05g029880 Solanum pennellii HOM05D008176 ORTHO05D004477 1.0e-07 60.8 118 40.7
Atru.chr3.1344 Acer truncatum HOM05D008176 ORTHO05D004477 1.3e-07 60.5 145 30.3
Manes.13G096700 Manihot esculenta HOM05D008176 ORTHO05D004477 1.3e-07 60.5 104 39.4
Psat7g056440 Pisum sativum HOM05D008176 ORTHO05D004477 1.3e-07 60.5 136 28.7
Duzib187G0825 Durio zibethinus HOM05D008176 ORTHO05D004477 2.2e-07 59.7 143 32.9
Gohir.A11G051100 Gossypium hirsutum HOM05D008176 ORTHO05D004477 2.2e-07 59.7 160 34.4
Gorai.007G059700 Gossypium raimondii HOM05D008176 ORTHO05D004477 2.2e-07 59.7 160 35.0
Lj4g0008028 Lotus japonicus HOM05D008176 ORTHO05D004477 2.2e-07 59.7 143 32.9
Cfa002600 Carpinus fangiana HOM05D008176 ORTHO05D004477 3.8e-07 58.9 154 40.9
FAN23G0907 Fragaria x ananassa HOM05D013332 ORTHO05D004477 3.8e-07 58.9 172 30.8
Lsat_1_v5_gn_1_3180 Lactuca sativa HOM05D008046 ORTHO05D004477 3.8e-07 58.9 153 43.1
QL02p002440 Quercus lobata HOM05D008046 ORTHO05D004477 3.8e-07 58.9 136 37.5
Glyma.05G175800 Glycine max HOM05D008176 ORTHO05D004477 6.5e-07 58.2 137 34.3
FvH4_1g20240 Fragaria vesca HOM05D013332 ORTHO05D004477 8.5e-07 57.8 172 36.0
FAN19G2695 Fragaria x ananassa HOM05D013332 ORTHO05D004477 8.5e-07 57.8 172 34.3
RcHm_v2.0_Chr2g0112381 Rosa chinensis HOM05D013332 ORTHO05D004477 1.1e-06 57.4 176 31.2
Manes.12G129900 Manihot esculenta HOM05D008176 ORTHO05D004477 1.5e-06 57.0 141 27.7
TWI74G1149 Tripterygium wilfordii HOM05D008176 ORTHO05D004477 1.5e-06 57.0 143 39.2
Aqoxy6G00716 Aquilegia oxysepala HOM05D008046 ORTHO05D004477 2.5e-06 56.2 156 38.5
Glyma.08G133100 Glycine max HOM05D008176 ORTHO05D004477 2.5e-06 56.2 137 29.2
CiPaw.16G033000 Carya illinoinensis HOM05D008046 ORTHO05D004477 4.2e-06 55.5 156 39.1
VMungo0251G0397 Vigna mungo HOM05D008176 ORTHO05D004477 4.2e-06 55.5 135 33.3
CiPaw.15G046100 Carya illinoinensis HOM05D008046 ORTHO05D004477 5.5e-06 55.1 154 34.4
Prupe.1G522800 Prunus persica HOM05D018381 ORTHO05D004477 5.5e-06 55.1 146 39.0
CiPaw.04G103600 Carya illinoinensis HOM05D008176 ORTHO05D004477 7.2e-06 54.7 142 33.8
Potri.005G161700 Populus trichocarpa HOM05D008046 ORTHO05D004477 7.2e-06 54.7 141 40.4
MSTRG.3689 Avicennia marina HOM05D008046 ORTHO05D004477 9.4e-06 54.3 138 37.7
EL10As13g24057 Beta vulgaris HOM05D031888 ORTHO05D004477 9.4e-06 54.3 111 44.1
Gohir.D11G054500 Gossypium hirsutum HOM05D008176 ORTHO05D004477 9.4e-06 54.3 164 34.1


User provided reference genes

Program Settings