Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014173 Daucus carota HOM05D006243 ORTHO05D007688 2.7e-223 778.5 434 100.0
GSVIVG01030779001 Vitis vinifera HOM05D006243 ORTHO05D007688 1.7e-140 503.4 434 68.7
Cc07_g13520 Coffea canephora HOM05D006243 ORTHO05D007688 3.2e-139 499.2 428 68.5
CSS0038083 Camellia sinensis var. sinensis HOM05D006243 ORTHO05D007688 3.3e-136 489.2 425 70.6
Haze_14258 Corylus avellana HOM05D006243 ORTHO05D007688 2.8e-135 486.1 428 68.9
Cfa007817 Carpinus fangiana HOM05D006243 ORTHO05D007688 4.8e-135 485.3 431 68.0
Peaxi162Scf00305g00613 Petunia axillaris HOM05D006243 ORTHO05D007688 2.4e-134 483.0 432 67.4
TAR629G1693 Trochodendron aralioides HOM05D006243 ORTHO05D007688 3.1e-134 482.6 445 65.2
Lj4A263G87 Lonicera japonica HOM05D006243 ORTHO05D007688 5.8e-133 478.4 341 81.2
HanXRQChr13g0418351 Helianthus annuus HOM05D006243 ORTHO05D007688 9.9e-133 477.6 433 66.1
Ciclev10011587m.g Citrus clementina HOM05D006243 ORTHO05D007688 1.3e-132 477.2 432 68.1
SalBow3G2874 Salvia bowleyana HOM05D006243 ORTHO05D007688 3.8e-132 475.7 432 65.7
Oeu032326.2 Olea europaea HOM05D006243 ORTHO05D007688 1.4e-131 473.8 425 68.5
Oeu012257.1 Olea europaea HOM05D006243 ORTHO05D007688 1.9e-131 473.4 432 67.4
CAN.G222.23 Capsicum annuum HOM05D006243 ORTHO05D007688 3.2e-131 472.6 432 66.4
Cpa.g.sc67.47 Carica papaya HOM05D006243 ORTHO05D007688 4.2e-131 472.2 434 66.4
Potri.017G129100 Populus trichocarpa HOM05D006243 ORTHO05D007688 2.7e-130 469.5 432 64.8
Lsat_1_v5_gn_3_64500 Lactuca sativa HOM05D006243 ORTHO05D007688 4.6e-130 468.8 454 60.4
Atru.chr1.1900 Acer truncatum HOM05D006243 ORTHO05D007688 1.0e-129 467.6 432 66.0
MD09G1263800 Malus domestica HOM05D006243 ORTHO05D007688 1.0e-129 467.6 430 65.1
ECA246G3278 Erigeron canadensis HOM05D006243 ORTHO05D007688 1.3e-129 467.2 432 64.8
Prupe.3G161300 Prunus persica HOM05D006243 ORTHO05D007688 1.8e-129 466.8 436 66.1
PGSC0003DMG402015686 Solanum tuberosum HOM05D006243 ORTHO05D007688 1.8e-129 466.8 432 66.2
Solyc11g011170.2 Solanum lycopersicum HOM05D006243 ORTHO05D007688 2.3e-129 466.5 432 66.2
Sopen11g005930 Solanum pennellii HOM05D006243 ORTHO05D007688 5.1e-129 465.3 432 66.2
FAN28G0309 Fragaria x ananassa HOM05D006243 ORTHO05D007688 8.7e-129 464.5 422 66.4
TWI53G0799 Tripterygium wilfordii HOM05D006243 ORTHO05D007688 8.7e-129 464.5 434 64.1
FvH4_1g28740 Fragaria vesca HOM05D006243 ORTHO05D007688 1.1e-128 464.2 422 66.1
FAN19G0552 Fragaria x ananassa HOM05D006243 ORTHO05D007688 1.9e-128 463.4 422 66.1
MSTRG.23392 Avicennia marina HOM05D006243 ORTHO05D007688 2.5e-128 463.0 432 65.3
FAN26G0580 Fragaria x ananassa HOM05D006243 ORTHO05D007688 9.6e-128 461.1 422 65.4
MD17G1259100 Malus domestica HOM05D006243 ORTHO05D007688 1.3e-127 460.7 433 64.4
Rhsim10G0177000 Rhododendron simsii HOM05D006243 ORTHO05D007688 8.1e-127 458.0 426 65.5
CiPaw.03G071500 Carya illinoinensis HOM05D006243 ORTHO05D007688 5.8e-125 451.8 434 63.8
RcHm_v2.0_Chr3g0493131 Rosa chinensis HOM05D006243 ORTHO05D007688 1.0e-124 451.1 422 64.7
Manes.01G117900 Manihot esculenta HOM05D006243 ORTHO05D007688 1.3e-124 450.7 425 65.6
Thecc.04G115200 Theobroma cacao HOM05D006243 ORTHO05D007688 1.3e-124 450.7 436 64.7
CANSAT64G2718 Cannabis sativa HOM05D006243 ORTHO05D007688 3.8e-124 449.1 432 62.5
Duzib133G1335 Durio zibethinus HOM05D006243 ORTHO05D007688 3.8e-124 449.1 418 65.8
Gohir.A07G078300 Gossypium hirsutum HOM05D006243 ORTHO05D007688 1.1e-123 447.6 429 65.5
Gorai.001G088700 Gossypium raimondii HOM05D006243 ORTHO05D007688 1.1e-123 447.6 429 65.5
Sabra17G0107600 Salix brachista HOM05D006243 ORTHO05D007688 2.5e-123 446.4 441 63.0
Actinidia06497 Actinidia chinensis HOM05D006243 ORTHO05D007688 4.2e-123 445.7 369 71.5
Gohir.D07G083100 Gossypium hirsutum HOM05D006243 ORTHO05D007688 6.0e-122 441.8 429 64.8
vmacro07692 Vaccinium macrocarpon HOM05D006243 ORTHO05D007688 3.9e-121 439.1 466 56.4
Nn4g24254 Nelumbo nucifera HOM05D006243 ORTHO05D007688 7.4e-120 434.9 444 61.9
Nitab4.5_0000201g0240 Nicotiana tabacum HOM05D006243 ORTHO05D007688 8.2e-119 431.4 426 63.6
Migut.H02264 Erythranthe guttata HOM05D006243 ORTHO05D007688 3.1e-118 429.5 432 63.0
Aqoxy3G00051 Aquilegia oxysepala HOM05D006243 ORTHO05D007688 1.3e-116 424.1 429 61.1
EL10Ac2g03168 Beta vulgaris HOM05D006243 ORTHO05D007688 8.4e-116 421.4 408 63.0
Lalb_Chr10g0104381 Lupinus albus HOM05D006243 ORTHO05D007688 8.4e-116 421.4 373 67.8
Eucgr.J01597 Eucalyptus grandis HOM05D006243 ORTHO05D007688 2.5e-115 419.9 373 68.4
arahy.Tifrunner.gnm1.ann1.Y3W4B5 Arachis hypogaea HOM05D006243 ORTHO05D007688 2.1e-114 416.8 331 75.2
Sc10g0004760 Simmondsia chinensis HOM05D006243 ORTHO05D007688 2.1e-114 416.8 387 65.9
PSO017G3733 Papaver somniferum HOM05D006243 ORTHO05D007688 7.9e-114 414.8 434 59.4
AUR62018213 Chenopodium quinoa HOM05D006243 ORTHO05D007688 8.7e-113 411.4 420 60.5
PSO478G0940 Papaver somniferum HOM05D006243 ORTHO05D007688 8.7e-113 411.4 427 59.5
AUR62038703 Chenopodium quinoa HOM05D006243 ORTHO05D007688 1.1e-112 411.0 386 64.0
ClCG05G011500 Citrullus lanatus HOM05D006243 ORTHO05D007688 2.5e-112 409.8 436 60.1
THA.LOC104805617 Tarenaya hassleriana HOM05D006243 ORTHO05D007688 8.2e-111 404.8 369 68.6
CsaV3_3G020810 Cucumis sativus L. HOM05D006243 ORTHO05D007688 1.1e-110 404.4 375 66.1
MELO3C020192.2 Cucumis melo HOM05D006243 ORTHO05D007688 4.1e-110 402.5 436 59.2
COL.COLO4_10159 Corchorus olitorius HOM05D006243 ORTHO05D007688 1.2e-109 401.0 347 69.7
Aa31LG2G3000 Aethionema arabicum HOM05D006243 ORTHO05D007688 2.0e-109 400.2 376 66.8
Sp5g21350 Schrenkiella parvula HOM05D006243 ORTHO05D007688 5.9e-109 398.7 375 69.1
Lalb_Chr17g0346141 Lupinus albus HOM05D006243 ORTHO05D007688 7.7e-109 398.3 378 65.9
BcaB03g15275 Brassica carinata HOM05D006243 ORTHO05D007688 2.2e-108 396.7 359 69.6
AL2G24050 Arabidopsis lyrata HOM05D006243 ORTHO05D007688 6.5e-108 395.2 378 67.2
Carub.0002s1234 Capsella rubella HOM05D006243 ORTHO05D007688 6.5e-108 395.2 432 60.9
CARHR058210 Cardamine hirsuta HOM05D006243 ORTHO05D007688 1.1e-107 394.4 386 65.8
Glyma.02G245300 Glycine max HOM05D006243 ORTHO05D007688 1.4e-107 394.0 394 61.9
ATR0317G069 Amborella trichopoda HOM05D006243 ORTHO05D007688 1.9e-107 393.7 441 56.7
Nitab4.5_0009518g0020 Nicotiana tabacum HOM05D006243 ORTHO05D007688 1.9e-107 393.7 425 60.5
AT1G66330 Arabidopsis thaliana HOM05D006243 ORTHO05D007688 5.5e-107 392.1 430 60.7
Phvul.008G235800 Phaseolus vulgaris HOM05D006243 ORTHO05D007688 5.5e-107 392.1 375 63.7
BcaC08g46068 Brassica carinata HOM05D006243 ORTHO05D007688 1.0e-105 387.9 365 68.8
BraA07t30960Z Brassica rapa HOM05D006243 ORTHO05D007688 1.4e-105 387.5 363 68.9
BcaB05g24167 Brassica carinata HOM05D006243 ORTHO05D007688 2.3e-105 386.7 374 65.8
Medtr5g078290 Medicago truncatula HOM05D006243 ORTHO05D007688 3.9e-105 386.0 366 64.8
LjContig00141g0011202 Lotus japonicus HOM05D006243 ORTHO05D007688 8.8e-105 384.8 392 59.2
A07p33290 Brassica napus HOM05D006243 ORTHO05D007688 2.5e-104 383.3 364 69.0
C06p39620 Brassica napus HOM05D006243 ORTHO05D007688 2.5e-104 383.3 366 68.6
BolC6t39055H Brassica oleracea HOM05D006243 ORTHO05D007688 2.5e-104 383.3 366 68.6
BraA02t06418Z Brassica rapa HOM05D006243 ORTHO05D007688 1.8e-102 377.1 377 65.3
Zm00001eb165460 Zea mays HOM05D006243 ORTHO05D007688 2.4e-102 376.7 335 68.4
SGA_v2.0_scaffold108G30955 Striga asiatica HOM05D006243 ORTHO05D007688 4.1e-102 375.9 440 59.1
BcaC03g14742 Brassica carinata HOM05D006243 ORTHO05D007688 6.9e-102 375.2 375 64.5
BolC2t08324H Brassica oleracea HOM05D006243 ORTHO05D007688 6.9e-102 375.2 375 64.5
PGR004G2672 Punica granatum HOM05D006243 ORTHO05D007688 2.6e-101 373.2 380 64.5
CDE04G1800 Ceratophyllum demersum HOM05D006243 ORTHO05D007688 1.0e-100 371.3 374 62.3
C02p21930 Brassica napus HOM05D006243 ORTHO05D007688 7.2e-99 365.2 351 65.5
A02p13590 Brassica napus HOM05D006243 ORTHO05D007688 1.6e-98 364.0 352 67.3
TPR.G8275 Trifolium pratense HOM05D006243 ORTHO05D007688 1.8e-97 360.5 300 64.3
Os05g0148700 Oryza sativa ssp. japonica HOM05D006243 ORTHO05D007688 8.8e-97 358.2 378 61.9
Hund13108 Selenicereus undatus HOM05D006243 ORTHO05D007688 1.4e-94 350.9 260 70.8
HPP92_027416 Vanilla planifolia HOM05D006243 ORTHO05D007688 4.5e-93 345.9 383 58.7
SEGI_26344 Sequoiadendron giganteum HOM05D006243 ORTHO05D007688 2.7e-90 336.7 324 65.1
arahy.Tifrunner.gnm1.ann1.SFD8TD Arachis hypogaea HOM05D006243 ORTHO05D007688 1.0e-89 334.7 331 65.9
Glyma.14G215400 Glycine max HOM05D006243 ORTHO05D007688 2.0e-88 330.5 320 65.0
unitig_736.g22596 Utricularia gibba HOM05D006243 ORTHO05D007688 1.4e-86 324.3 260 67.7
Thhalv10018612m.g Eutrema salsugineum HOM05D006243 ORTHO05D007688 1.7e-79 300.8 354 60.5
Sed0013436 Sechium edule HOM05D006243 ORTHO05D007688 3.7e-79 299.7 324 60.8
Ca_05826_v3 Cicer arietinum L. HOM05D006243 ORTHO05D007688 1.0e-76 291.6 367 54.8
Actinidia17213 Actinidia chinensis HOM05D006243 ORTHO05D007688 2.2e-71 273.9 198 75.3
MD17G1258600 Malus domestica HOM05D006243 ORTHO05D007688 8.9e-65 251.9 228 61.8
Ah.10g032360 Amaranthus hybridus HOM05D006243 ORTHO05D007688 2.0e-64 250.8 407 40.5
Dinv28209 Davidia involucrata HOM05D006243 ORTHO05D007688 2.6e-64 250.4 237 66.7
Psat2g047960 Pisum sativum HOM05D006243 ORTHO05D007688 3.7e-55 219.9 265 57.7
Mapoly0055s0114 Marchantia polymorpha HOM05D006243 ORTHO05D007688 9.2e-54 215.3 337 45.4
VMungo0647G1521 Vigna mungo HOM05D006243 ORTHO05D007688 6.8e-49 199.1 137 75.9
Pp3c5_8230 Physcomitrium patens HOM05D006243 ORTHO05D007688 1.2e-48 198.4 307 48.5
Pp3c16_1710 Physcomitrium patens HOM05D006243 ORTHO05D007688 2.2e-47 194.1 237 45.6
VMungo0647G1427 Vigna mungo HOM05D006243 ORTHO05D007688 2.9e-47 193.7 237 56.5
AagrBONN_evm.TU.Sc2ySwM_117.2468 Anthoceros agrestis HOM05D006243 ORTHO05D007688 1.1e-46 191.8 311 44.7
Pp3c25_7980 Physcomitrium patens HOM05D006243 ORTHO05D007688 3.0e-44 183.7 224 46.0
QL02p058075 Quercus lobata HOM05D006243 ORTHO05D007688 7.3e-43 179.1 219 58.9
Lsat_1_v5_gn_2_20381 Lactuca sativa HOM05D006243 ORTHO05D007688 2.3e-41 174.1 125 72.0
SMO238G0021 Selaginella moellendorffii HOM05D006243 ORTHO05D007688 4.4e-32 143.3 249 37.3
CBR_g27960 Chara braunii HOM05D006243 ORTHO05D007688 1.7e-31 141.4 211 40.3
RcHm_v2.0_Chr7g0216651 Rosa chinensis HOM05D006243 ORTHO05D007688 1.1e-27 128.6 77 84.4
Actinidia17214 Actinidia chinensis HOM05D006243 ORTHO05D007688 6.4e-23 112.8 155 52.3
Lsat_1_v5_gn_9_50281 Lactuca sativa HOM05D006243 ORTHO05D007688 5.3e-17 93.2 60 75.0
unitig_736.g22595 Utricularia gibba HOM05D006243 ORTHO05D007688 9.3e-14 82.4 137 40.1
Lsat_1_v5_gn_9_64341 Lactuca sativa HOM05D000326 ORTHO05D000312 1.3e-12 78.6 168 37.5
Hund13037 Selenicereus undatus HOM05D006243 ORTHO05D007688 2.0e-08 64.7 139 31.7


User provided reference genes

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