Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014163 Daucus carota HOM05D008015 ORTHO05D009180 4.4e-98 361.3 183 100.0
Ciclev10012847m.g Citrus clementina HOM05D008015 ORTHO05D009180 1.6e-23 113.6 185 41.1
QL02p059324 Quercus lobata HOM05D008015 ORTHO05D009180 3.9e-22 109.0 192 39.6
TAR629G2519 Trochodendron aralioides HOM05D008015 ORTHO05D009180 3.9e-22 109.0 182 43.4
Duzib268G1603 Durio zibethinus HOM05D008015 ORTHO05D009180 1.1e-21 107.5 165 45.5
CSS0009801 Camellia sinensis var. sinensis HOM05D008015 ORTHO05D009180 1.5e-21 107.1 163 42.3
CSS0018355 Camellia sinensis var. sinensis HOM05D008015 ORTHO05D009180 1.5e-21 107.1 163 42.3
Oeu032314.1 Olea europaea HOM05D008015 ORTHO05D009180 1.5e-21 107.1 179 39.1
Nn4g24386 Nelumbo nucifera HOM05D008015 ORTHO05D009180 5.6e-21 105.1 177 41.8
TAR371G1005 Trochodendron aralioides HOM05D008015 ORTHO05D009180 8.2e-20 101.3 191 39.3
SalBow5G5173 Salvia bowleyana HOM05D008015 ORTHO05D009180 2.4e-19 99.8 153 38.6
Potri.004G085100 Populus trichocarpa HOM05D008015 ORTHO05D009180 5.3e-19 98.6 168 39.9
ClCG03G008850 Citrullus lanatus HOM05D008015 ORTHO05D009180 9.0e-19 97.8 166 39.2
CiPaw.03G073500 Carya illinoinensis HOM05D008015 ORTHO05D009180 1.2e-18 97.4 192 35.9
Cfa007792 Carpinus fangiana HOM05D008015 ORTHO05D009180 3.4e-18 95.9 190 37.9
Cc07_g13270 Coffea canephora HOM05D008015 ORTHO05D009180 5.8e-18 95.1 187 37.4
Actinidia35723 Actinidia chinensis HOM05D008015 ORTHO05D009180 2.2e-17 93.2 165 41.2
LjContig00141g0001505 Lotus japonicus HOM05D008015 ORTHO05D009180 2.2e-17 93.2 164 40.2
Lalb_Chr18g0053531 Lupinus albus HOM05D008015 ORTHO05D009180 2.2e-17 93.2 168 39.3
Thecc.04G053900 Theobroma cacao HOM05D008015 ORTHO05D009180 2.2e-17 93.2 219 36.1
Sed0025761 Sechium edule HOM05D008015 ORTHO05D009180 2.9e-17 92.8 143 38.5
Rhsim10G0178500 Rhododendron simsii HOM05D008015 ORTHO05D009180 3.8e-17 92.4 190 36.3
Cpa.g.sc340.4 Carica papaya HOM05D008015 ORTHO05D009180 4.9e-17 92.0 207 33.8
Glyma.14G213100 Glycine max HOM05D008015 ORTHO05D009180 1.1e-16 90.9 180 40.0
Potri.017G131300 Populus trichocarpa HOM05D008015 ORTHO05D009180 4.2e-16 89.0 177 38.4
Medtr5g077940 Medicago truncatula HOM05D008015 ORTHO05D009180 7.1e-16 88.2 181 37.0
MELO3C022825.2 Cucumis melo HOM05D008015 ORTHO05D009180 9.3e-16 87.8 175 37.1
SGA_v2.0_scaffold45G17152 Striga asiatica HOM05D008015 ORTHO05D009180 9.3e-16 87.8 172 37.2
Lalb_Chr17g0346041 Lupinus albus HOM05D008015 ORTHO05D009180 1.2e-15 87.4 153 41.2
Medtr3g065210 Medicago truncatula HOM05D008015 ORTHO05D009180 2.7e-15 86.3 163 35.6
Glyma.18G041300 Glycine max HOM05D008015 ORTHO05D009180 3.5e-15 85.9 104 46.2
VMungo0647G1978 Vigna mungo HOM05D008015 ORTHO05D009180 3.5e-15 85.9 161 36.6
Eucgr.F02874 Eucalyptus grandis HOM05D008015 ORTHO05D009180 4.6e-15 85.5 118 43.2
Lalb_Chr15g0084981 Lupinus albus HOM05D008015 ORTHO05D009180 6.0e-15 85.1 179 38.0
Sabra17G0109400 Salix brachista HOM05D008015 ORTHO05D009180 1.3e-14 84.0 168 37.5
Nn3g18370 Nelumbo nucifera HOM05D008015 ORTHO05D009180 1.8e-14 83.6 103 42.7
CANSAT35G1526 Cannabis sativa HOM05D008015 ORTHO05D009180 3.9e-14 82.4 169 37.3
MBI19_g08383_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 3.9e-14 82.4 184 37.0
CDE05G0668 Ceratophyllum demersum HOM05D006178 ORTHO05D007504 6.7e-14 81.6 165 35.8
MBI13_g45895_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 1.5e-13 80.5 157 35.0
TPR.G30001 Trifolium pratense HOM05D008015 ORTHO05D009180 1.9e-13 80.1 149 36.2
Gohir.D07G078200 Gossypium hirsutum HOM05D008015 ORTHO05D009180 2.5e-13 79.7 136 39.7
Gorai.001G082600 Gossypium raimondii HOM05D008015 ORTHO05D009180 2.5e-13 79.7 136 39.7
RcHm_v2.0_Chr3g0491241 Rosa chinensis HOM05D008015 ORTHO05D009180 2.5e-13 79.7 223 35.9
TWI77G0273 Tripterygium wilfordii HOM05D008015 ORTHO05D009180 2.5e-13 79.7 160 38.8
FAN26G1918 Fragaria x ananassa HOM05D008015 ORTHO05D009180 4.3e-13 79.0 200 34.0
MSTRG.3702 Avicennia marina HOM05D008015 ORTHO05D009180 5.7e-13 78.6 182 35.7
Gohir.A07G073500 Gossypium hirsutum HOM05D008015 ORTHO05D009180 5.7e-13 78.6 136 39.0
CsaV3_5G023910 Cucumis sativus L. HOM05D009275 ORTHO05D009180 9.7e-13 77.8 153 35.9
FAN23G1273 Fragaria x ananassa HOM05D008015 ORTHO05D009180 1.3e-12 77.4 199 34.2
Prupe.3G166400 Prunus persica HOM05D008015 ORTHO05D009180 1.6e-12 77.0 107 43.0
Thhalv10027910m.g Eutrema salsugineum HOM05D009275 ORTHO05D009180 2.2e-12 76.6 160 33.8
VMungo1383G2632 Vigna mungo HOM05D008015 ORTHO05D009180 2.2e-12 76.6 103 43.7
Actinidia28799 Actinidia chinensis HOM05D008015 ORTHO05D009180 2.8e-12 76.3 137 36.5
CDE05G1037 Ceratophyllum demersum HOM05D008015 ORTHO05D009180 2.8e-12 76.3 163 34.4
Manes.02G078100 Manihot esculenta HOM05D008015 ORTHO05D009180 2.8e-12 76.3 115 43.5
ATR0753G067 Amborella trichopoda HOM05D008015 ORTHO05D009180 3.7e-12 75.9 178 29.2
Dinv28182 Davidia involucrata HOM05D008015 ORTHO05D009180 3.7e-12 75.9 172 36.0
MBI13_g14024_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 6.3e-12 75.1 161 32.9
Psat2g045760 Pisum sativum HOM05D008015 ORTHO05D009180 1.4e-11 73.9 114 37.7
Actinidia17202 Actinidia chinensis HOM05D008015 ORTHO05D009180 1.8e-11 73.6 158 34.8
AL7G46310 Arabidopsis lyrata HOM05D009275 ORTHO05D009180 3.1e-11 72.8 167 33.5
MD09G1270500 Malus domestica HOM05D008015 ORTHO05D009180 9.0e-11 71.2 208 32.2
FvH4_1g30203 Fragaria vesca HOM05D008015 ORTHO05D009180 1.2e-10 70.9 122 38.5
Phvul.001G229400 Phaseolus vulgaris HOM05D008015 ORTHO05D009180 2.0e-10 70.1 107 38.3
CARHR215350 Cardamine hirsuta HOM05D009275 ORTHO05D009180 2.6e-10 69.7 157 35.0
COL.COLO4_13422 Corchorus olitorius HOM05D009275 ORTHO05D009180 2.6e-10 69.7 178 33.1
unitig_32.g11793 Utricularia gibba HOM05D008015 ORTHO05D009180 2.6e-10 69.7 167 34.1
A04p10720 Brassica napus HOM05D009275 ORTHO05D009180 3.4e-10 69.3 153 35.9
BraA04t16736Z Brassica rapa HOM05D009275 ORTHO05D009180 5.9e-10 68.6 153 35.9
Sp7g04570 Schrenkiella parvula HOM05D009275 ORTHO05D009180 5.9e-10 68.6 154 36.4
BcaB06g27100 Brassica carinata HOM05D009275 ORTHO05D009180 7.7e-10 68.2 157 36.9
PGR004G2766 Punica granatum HOM05D009275 ORTHO05D009180 1.7e-09 67.0 72 47.2
TWI74G1025 Tripterygium wilfordii HOM05D008015 ORTHO05D009180 1.7e-09 67.0 140 37.9
CARHR292200 Cardamine hirsuta HOM05D009275 ORTHO05D009180 2.2e-09 66.6 117 41.9
Lsat_1_v5_gn_8_114880 Lactuca sativa HOM05D008015 ORTHO05D009180 2.9e-09 66.2 140 37.9
AT5G37550 Arabidopsis thaliana HOM05D009275 ORTHO05D009180 3.8e-09 65.9 159 32.1
Migut.K00921 Erythranthe guttata HOM05D008015 ORTHO05D009180 5.0e-09 65.5 173 34.1
BcaC02g09585 Brassica carinata HOM05D009275 ORTHO05D009180 6.5e-09 65.1 92 44.6
C04p44430 Brassica napus HOM05D009275 ORTHO05D009180 6.5e-09 65.1 92 44.6
BolC4t26014H Brassica oleracea HOM05D009275 ORTHO05D009180 6.5e-09 65.1 92 44.6
PSO478G3758 Papaver somniferum HOM05D008015 ORTHO05D009180 6.5e-09 65.1 103 39.8
Glyma.11G215300 Glycine max HOM05D008015 ORTHO05D009180 8.5e-09 64.7 104 38.5
MBI13_g24899_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 1.1e-08 64.3 49 55.1
Aa31LG2G2900 Aethionema arabicum HOM05D009275 ORTHO05D009180 1.9e-08 63.5 114 43.0
Carub.0007s3272 Capsella rubella HOM05D009275 ORTHO05D009180 1.9e-08 63.5 91 45.1
Phvul.008G237600 Phaseolus vulgaris HOM05D008015 ORTHO05D009180 1.9e-08 63.5 127 37.0
Aa31LG9G17500 Aethionema arabicum HOM05D009275 ORTHO05D009180 2.5e-08 63.2 96 41.7
Thhalv10019019m.g Eutrema salsugineum HOM05D009275 ORTHO05D009180 7.2e-08 61.6 98 45.9
arahy.Tifrunner.gnm1.ann1.NRE7W4 Arachis hypogaea HOM05D009275 ORTHO05D009180 9.4e-08 61.2 101 38.6
Lj2P519T18 Lonicera japonica HOM05D008015 ORTHO05D009180 1.2e-07 60.8 118 37.3
Sp5g21250 Schrenkiella parvula HOM05D009275 ORTHO05D009180 2.1e-07 60.1 98 44.9
AL2G23880 Arabidopsis lyrata HOM05D009275 ORTHO05D009180 2.7e-07 59.7 99 44.4
arahy.Tifrunner.gnm1.ann1.I66ZQ3 Arachis hypogaea HOM05D009275 ORTHO05D009180 2.7e-07 59.7 152 31.6
A02p13520 Brassica napus HOM05D009275 ORTHO05D009180 2.7e-07 59.7 98 44.9
BcaB05g24157 Brassica carinata HOM05D009275 ORTHO05D009180 3.6e-07 59.3 98 44.9
AT1G66190 Arabidopsis thaliana HOM05D009275 ORTHO05D009180 4.6e-07 58.9 100 43.0
BcaC03g14735 Brassica carinata HOM05D009275 ORTHO05D009180 4.6e-07 58.9 98 44.9
C02p21840 Brassica napus HOM05D009275 ORTHO05D009180 4.6e-07 58.9 98 44.9
BolC2t08316H Brassica oleracea HOM05D009275 ORTHO05D009180 4.6e-07 58.9 98 44.9
BraA02t06410Z Brassica rapa HOM05D009275 ORTHO05D009180 4.6e-07 58.9 98 44.9
Aqoxy1G02179 Aquilegia oxysepala HOM05D008015 ORTHO05D009180 6.1e-07 58.5 170 32.4
THA.LOC104805631 Tarenaya hassleriana HOM05D009275 ORTHO05D009180 1.4e-06 57.4 52 59.6
THA.LOC104822277 Tarenaya hassleriana HOM05D009275 ORTHO05D009180 1.8e-06 57.0 158 34.8
Carub.0002s1218 Capsella rubella HOM05D009275 ORTHO05D009180 2.3e-06 56.6 100 46.0
FAN19G3187 Fragaria x ananassa HOM05D008015 ORTHO05D009180 2.3e-06 56.6 189 30.7


User provided reference genes

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