Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014158 Daucus carota HOM05D002544 ORTHO05D007856 0.0e+00 1287.3 665 100.0
Dinv19050 Davidia involucrata HOM05D002544 ORTHO05D007856 3.3e-268 928.3 671 70.2
CSS0008925 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D007856 2.2e-264 915.6 671 68.6
CSS0046327 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D007856 7.8e-262 907.1 670 68.2
Lj4A258G27 Lonicera japonica HOM05D002544 ORTHO05D007856 2.8e-259 898.7 654 70.6
Hma1.2p1_0158F.1_g070010 Hydrangea macrophylla HOM05D002544 ORTHO05D007856 6.2e-259 897.5 641 69.7
Solyc11g011480.2 Solanum lycopersicum HOM05D002544 ORTHO05D007856 5.4e-255 884.4 670 67.5
Sopen11g006270 Solanum pennellii HOM05D002544 ORTHO05D007856 7.0e-255 884.0 670 67.6
Prupe.3G165300 Prunus persica HOM05D002544 ORTHO05D007856 4.6e-254 881.3 645 69.3
GSVIVG01030701001 Vitis vinifera HOM05D002544 ORTHO05D007856 1.9e-252 875.9 672 67.1
Actinidia06481 Actinidia chinensis HOM05D002544 ORTHO05D007856 1.6e-251 872.8 671 65.4
QL03p020295 Quercus lobata HOM05D002544 ORTHO05D007856 4.7e-251 871.3 663 67.0
Actinidia17196 Actinidia chinensis HOM05D002544 ORTHO05D007856 1.4e-250 869.8 671 65.6
MD17G1267200 Malus domestica HOM05D002544 ORTHO05D007856 9.9e-249 863.6 671 66.0
Ciclev10000514m.g Citrus clementina HOM05D002544 ORTHO05D007856 1.4e-247 859.8 664 66.3
Glyma.11G214700 Glycine max HOM05D002544 ORTHO05D007856 1.4e-247 859.8 655 64.9
VMungo1383G1931 Vigna mungo HOM05D002544 ORTHO05D007856 3.2e-247 858.6 665 64.1
CAN.G222.63 Capsicum annuum HOM05D002544 ORTHO05D007856 4.1e-247 858.2 671 66.0
Nitab4.5_0011135g0020 Nicotiana tabacum HOM05D002544 ORTHO05D007856 4.1e-247 858.2 642 67.8
Rhsim10G0180300 Rhododendron simsii HOM05D002544 ORTHO05D007856 9.2e-247 857.1 662 65.7
Glyma.18G041900 Glycine max HOM05D002544 ORTHO05D007856 1.6e-246 856.3 666 64.3
Gohir.D05G289100 Gossypium hirsutum HOM05D002544 ORTHO05D007856 2.7e-246 855.5 669 66.2
CiPaw.03G074200 Carya illinoinensis HOM05D002544 ORTHO05D007856 3.5e-246 855.1 643 66.4
Lj6g0017134 Lotus japonicus HOM05D002544 ORTHO05D007856 7.8e-246 854.0 645 64.8
TAR622G0658 Trochodendron aralioides HOM05D002544 ORTHO05D007856 2.3e-245 852.4 673 65.2
Manes.02G078600 Manihot esculenta HOM05D002544 ORTHO05D007856 5.1e-245 851.3 643 65.8
Duzib128G1814 Durio zibethinus HOM05D002544 ORTHO05D007856 1.1e-244 850.1 701 63.2
RcHm_v2.0_Chr3g0492061 Rosa chinensis HOM05D002544 ORTHO05D007856 1.1e-244 850.1 670 65.1
Atru.chr1.2033 Acer truncatum HOM05D002544 ORTHO05D007856 1.5e-244 849.7 671 64.7
Nn3g18419 Nelumbo nucifera HOM05D002544 ORTHO05D007856 1.5e-244 849.7 663 65.6
HanXRQChr16g0532811 Helianthus annuus HOM05D002544 ORTHO05D007856 1.9e-244 849.4 671 65.7
Gohir.A05G287900 Gossypium hirsutum HOM05D002544 ORTHO05D007856 4.3e-244 848.2 671 65.3
Gorai.009G304200 Gossypium raimondii HOM05D002544 ORTHO05D007856 7.3e-244 847.4 669 65.6
TWI53G0412 Tripterygium wilfordii HOM05D002544 ORTHO05D007856 9.5e-244 847.0 662 65.3
Phvul.001G228700 Phaseolus vulgaris HOM05D002544 ORTHO05D007856 1.6e-243 846.3 667 63.3
Lalb_Chr18g0053551 Lupinus albus HOM05D002544 ORTHO05D007856 2.1e-243 845.9 668 63.3
FvH4_1g30060 Fragaria vesca HOM05D002544 ORTHO05D007856 2.8e-243 845.5 670 64.3
Migut.K00933 Erythranthe guttata HOM05D002544 ORTHO05D007856 3.1e-242 842.0 673 63.6
Ca_17085_v3 Cicer arietinum L. HOM05D002544 ORTHO05D007856 4.0e-242 841.6 643 65.2
vmacro20587 Vaccinium macrocarpon HOM05D002544 ORTHO05D007856 2.0e-241 839.3 698 61.9
arahy.Tifrunner.gnm1.ann1.644H52 Arachis hypogaea HOM05D002544 ORTHO05D007856 4.9e-240 834.7 644 63.7
Potri.004G082900 Populus trichocarpa HOM05D002544 ORTHO05D007856 3.2e-239 832.0 671 63.9
arahy.Tifrunner.gnm1.ann1.5E142I Arachis hypogaea HOM05D002544 ORTHO05D007856 7.1e-239 830.9 644 63.7
Haze_14286 Corylus avellana HOM05D002544 ORTHO05D007856 2.3e-237 825.9 670 64.8
TPR.G23205 Trifolium pratense HOM05D002544 ORTHO05D007856 1.1e-236 823.5 665 62.1
CsaV3_3G017820 Cucumis sativus L. HOM05D002544 ORTHO05D007856 6.2e-235 817.8 664 63.1
Medtr3g065110 Medicago truncatula HOM05D002544 ORTHO05D007856 6.2e-235 817.8 666 62.0
Sed0025118 Sechium edule HOM05D002544 ORTHO05D007856 8.1e-235 817.4 662 63.6
Eucgr.F02879 Eucalyptus grandis HOM05D002544 ORTHO05D007856 1.2e-233 813.5 686 60.9
PGR004G1819 Punica granatum HOM05D002544 ORTHO05D007856 2.0e-233 812.8 673 62.0
ECA236G0457 Erigeron canadensis HOM05D002544 ORTHO05D007856 4.4e-233 811.6 647 64.5
COL.COLO4_38545 Corchorus olitorius HOM05D002544 ORTHO05D007856 4.9e-232 808.1 690 60.4
CANSAT25G3407 Cannabis sativa HOM05D002544 ORTHO05D007856 2.4e-231 805.8 656 62.5
AL5G33420 Arabidopsis lyrata HOM05D002544 ORTHO05D007856 1.6e-230 803.1 667 60.7
Sp5g09650 Schrenkiella parvula HOM05D002544 ORTHO05D007856 6.0e-230 801.2 646 61.6
Cfa007785 Carpinus fangiana HOM05D002544 ORTHO05D007856 1.0e-229 800.4 632 65.8
AT3G52640 Arabidopsis thaliana HOM05D002544 ORTHO05D007856 2.3e-229 799.3 669 60.2
Peaxi162Scf00464g00433 Petunia axillaris HOM05D002544 ORTHO05D007856 3.9e-229 798.5 640 64.7
Oeu030291.2 Olea europaea HOM05D002544 ORTHO05D007856 5.1e-229 798.1 730 57.5
Lsat_1_v5_gn_3_63981 Lactuca sativa HOM05D002544 ORTHO05D007856 1.5e-228 796.6 649 64.4
Thecc.10G105700 Theobroma cacao HOM05D002544 ORTHO05D007856 1.9e-228 796.2 580 69.5
PSO063G6024 Papaver somniferum HOM05D002544 ORTHO05D007856 1.3e-227 793.5 663 60.6
A04p06810 Brassica napus HOM05D002544 ORTHO05D007856 1.1e-226 790.4 673 59.6
Aqoxy3G04067 Aquilegia oxysepala HOM05D002544 ORTHO05D007856 4.0e-226 788.5 670 61.2
Carub.0005s1906 Capsella rubella HOM05D002544 ORTHO05D007856 5.3e-226 788.1 667 60.1
PSO782G4267 Papaver somniferum HOM05D002544 ORTHO05D007856 1.5e-225 786.6 663 60.3
THA.LOC104805637 Tarenaya hassleriana HOM05D002544 ORTHO05D007856 2.6e-225 785.8 694 58.1
Cc07_g13210 Coffea canephora HOM05D002544 ORTHO05D007856 6.4e-224 781.2 572 68.5
FAN28G1090 Fragaria x ananassa HOM05D002544 ORTHO05D007856 8.4e-224 780.8 669 61.6
Sabra04G0055200 Salix brachista HOM05D002544 ORTHO05D007856 2.4e-223 779.2 736 56.8
BcaB02g08559 Brassica carinata HOM05D002544 ORTHO05D007856 1.2e-222 776.9 666 59.3
Thhalv10010197m.g Eutrema salsugineum HOM05D002544 ORTHO05D007856 1.2e-222 776.9 634 60.4
Sc04g0005080 Simmondsia chinensis HOM05D002544 ORTHO05D007856 2.1e-222 776.2 665 60.2
C04p40360 Brassica napus HOM05D002544 ORTHO05D007856 4.6e-222 775.0 669 59.3
EL10Ac2g03312 Beta vulgaris HOM05D002544 ORTHO05D007856 6.0e-222 774.6 664 59.8
BcaC02g09234 Brassica carinata HOM05D002544 ORTHO05D007856 1.3e-221 773.5 670 58.8
Nitab4.5_0006562g0020 Nicotiana tabacum HOM05D002544 ORTHO05D007856 2.5e-220 769.2 631 63.4
FAN19G2740 Fragaria x ananassa HOM05D002544 ORTHO05D007856 3.3e-220 768.8 572 67.0
BraA04t16380Z Brassica rapa HOM05D002544 ORTHO05D007856 2.1e-219 766.1 724 55.4
Aa31LG10G7700 Aethionema arabicum HOM05D002544 ORTHO05D007856 2.4e-218 762.7 696 56.5
SGA_v2.0_scaffold45G17141 Striga asiatica HOM05D002544 ORTHO05D007277 2.9e-216 755.7 640 60.2
BolC4t25616H Brassica oleracea HOM05D002544 ORTHO05D007856 1.5e-212 743.4 739 53.7
ClCG05G010690 Citrullus lanatus HOM05D002544 ORTHO05D007856 1.5e-212 743.4 710 56.9
ATR0118G015 Amborella trichopoda HOM05D002544 ORTHO05D007856 3.7e-211 738.8 667 58.3
Zm00001eb190390 Zea mays HOM05D002544 ORTHO05D007856 1.1e-210 737.3 666 55.7
AUR62040737 Chenopodium quinoa HOM05D002544 ORTHO05D007856 3.4e-209 732.3 660 57.1
Os02g0736500 Oryza sativa ssp. japonica HOM05D002544 ORTHO05D007856 1.0e-208 730.7 665 55.3
MBI13_g24909_MAGBIO Magnolia biondii HOM05D002544 ORTHO05D007856 2.2e-208 729.6 703 56.3
PGSC0003DMG400013310 Solanum tuberosum HOM05D002544 ORTHO05D007856 3.8e-208 728.8 514 71.8
Ah.10g032440 Amaranthus hybridus HOM05D002544 ORTHO05D007856 7.9e-206 721.1 693 55.8
Cpa.g.sc116.76 Carica papaya HOM05D002544 ORTHO05D007856 1.2e-201 707.2 554 64.8
Psat5g119600 Pisum sativum HOM05D002544 ORTHO05D007856 1.5e-201 706.8 555 63.2
CDE05G1209 Ceratophyllum demersum HOM05D002544 ORTHO05D007856 1.0e-200 704.1 667 54.9
AUR62037665 Chenopodium quinoa HOM05D002544 ORTHO05D007856 6.3e-195 684.9 661 55.1
FAN26G1528 Fragaria x ananassa HOM05D002544 ORTHO05D007856 8.5e-192 674.5 668 54.6
unitig_748.g8462 Utricularia gibba HOM05D002544 ORTHO05D007856 6.7e-189 664.8 673 55.0
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 2.0e-180 636.7 618 55.0
CARHR162460 Cardamine hirsuta HOM05D002544 ORTHO05D007856 2.4e-178 629.8 494 64.2
HPP92_026943 Vanilla planifolia HOM05D002544 ORTHO05D007856 5.3e-178 628.6 593 55.5
Mapoly0182s0008 Marchantia polymorpha HOM05D002544 ORTHO05D007856 2.2e-163 580.1 673 47.8
SMO115G0276 Selaginella moellendorffii HOM05D002544 ORTHO05D007856 1.9e-159 567.0 648 47.2
Hma1.2p1_0158F.1_g070020 Hydrangea macrophylla HOM05D002544 ORTHO05D007856 3.9e-144 516.2 351 71.5
AagrBONN_evm.TU.Sc2ySwM_228.3612 Anthoceros agrestis HOM05D002544 ORTHO05D007856 3.3e-135 486.5 679 42.3
Pp3c25_11440 Physcomitrium patens HOM05D002544 ORTHO05D007856 8.7e-120 435.3 579 44.0
QL02p059469 Quercus lobata HOM05D002544 ORTHO05D007856 8.7e-120 435.3 320 67.2
Lj4C412G0 Lonicera japonica HOM05D002544 ORTHO05D007856 1.5e-95 354.8 368 53.8
SEGI_34556 Sequoiadendron giganteum HOM05D002544 ORTHO05D007856 1.0e-91 342.0 307 56.0
Hund13079 Selenicereus undatus HOM05D002544 ORTHO05D007856 1.5e-87 328.2 355 52.1
Cre06.g294400 Chlamydomonas reinhardtii HOM05D002544 ORTHO05D007856 2.1e-73 281.2 645 32.6
HPP92_021312 Vanilla planifolia HOM05D002544 ORTHO05D007856 7.9e-73 279.3 240 60.0
Zm00001eb382220 Zea mays HOM05D002544 ORTHO05D007856 2.2e-62 244.6 330 43.6
CBR_g26303 Chara braunii HOM05D002544 ORTHO05D000002 1.8e-45 188.3 307 35.5
CARHR162470 Cardamine hirsuta HOM05D002544 ORTHO05D007856 9.8e-39 166.0 177 49.2
MCO14G034 Micromonas commoda HOM05D002544 ORTHO05D007856 1.3e-38 165.6 648 27.3
Zm00001eb280470 Zea mays HOM05D003723 ORTHO05D004306 2.1e-33 148.3 309 32.0
Zm00001eb289130 Zea mays HOM05D002544 ORTHO05D007856 2.3e-32 144.8 134 54.5
CBR_g37928 Chara braunii HOM05D000601 ORTHO05D000301 1.4e-24 119.0 178 42.1
CBR_g26304 Chara braunii HOM05D002544 ORTHO05D007856 7.5e-23 113.2 115 53.9
Cc07_g13200 Coffea canephora HOM05D002544 ORTHO05D007856 2.2e-22 111.7 106 59.4
Zm00001eb340210 Zea mays HOM05D002544 ORTHO05D007856 1.5e-18 99.0 110 49.1
Hma1.2p1_0594F.1_g185860 Hydrangea macrophylla HOM05D006828 ORTHO05D008312 2.5e-18 98.2 77 58.4
Haze_22892 Corylus avellana HOM05D002544 ORTHO05D007856 1.4e-16 92.4 104 46.2
HPP92_021313 Vanilla planifolia HOM05D002544 ORTHO05D007856 1.3e-11 75.9 66 53.0
CSS0029470 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D033931 2.3e-11 75.1 42 78.6
CSS0043407 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D033931 2.3e-11 75.1 42 76.2
HPP92_026942 Vanilla planifolia HOM05D002544 ORTHO05D007856 3.3e-10 71.2 96 45.8
FvH4_4g11392 Fragaria vesca HOM05D000005 ORTHO05D000012 5.6e-10 70.5 59 61.0
FAN12G0356 Fragaria x ananassa HOM05D002544 ORTHO05D007856 1.2e-09 69.3 47 68.1
FAN02G2717 Fragaria x ananassa HOM05D002544 ORTHO05D007856 1.6e-09 68.9 47 68.1
HPP92_021314 Vanilla planifolia HOM05D002544 ORTHO05D007856 1.6e-09 68.9 74 51.4
C04p40260 Brassica napus HOM05D002544 ORTHO05D007856 3.6e-09 67.8 62 50.0
BolC4t25605H Brassica oleracea HOM05D002544 ORTHO05D007856 3.6e-09 67.8 62 50.0
Gohir.A10G100500 Gossypium hirsutum HOM05D002544 ORTHO05D033931 8.1e-09 66.6 42 73.8
FAN02G1722 Fragaria x ananassa HOM05D002544 ORTHO05D007856 1.8e-08 65.5 85 45.9


User provided reference genes

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