Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014130 Daucus carota HOM05D004654 ORTHO05D005414 6.4e-91 337.4 173 100.0
DCAR_002994 Daucus carota HOM05D004654 ORTHO05D005414 1.5e-18 97.1 178 45.5
Lsat_1_v5_gn_2_72380 Lactuca sativa HOM05D004654 ORTHO05D005414 1.8e-16 90.1 151 42.4
Rhsim08G0023400 Rhododendron simsii HOM05D004654 ORTHO05D005414 1.5e-15 87.0 176 38.6
SalBow6G0287 Salvia bowleyana HOM05D004654 ORTHO05D005414 9.8e-15 84.3 165 37.6
A07p32950 Brassica napus HOM05D004654 ORTHO05D005414 4.8e-14 82.0 176 37.5
BraA07t30922Z Brassica rapa HOM05D004654 ORTHO05D005414 8.3e-14 81.3 176 36.9
Lsat_1_v5_gn_3_68821 Lactuca sativa HOM05D004654 ORTHO05D005414 8.3e-14 81.3 153 42.5
Lsat_1_v5_gn_8_113741 Lactuca sativa HOM05D004654 ORTHO05D005414 1.1e-13 80.9 176 35.8
BolC6t39010H Brassica oleracea HOM05D004654 ORTHO05D005414 1.4e-13 80.5 180 37.8
Sp5g20670 Schrenkiella parvula HOM05D004654 ORTHO05D005414 1.4e-13 80.5 172 39.5
HanXRQChr15g0485191 Helianthus annuus HOM05D004654 ORTHO05D005414 1.8e-13 80.1 165 38.2
Oeu024775.2 Olea europaea HOM05D004654 ORTHO05D005414 1.8e-13 80.1 173 35.8
BcaC03g14719 Brassica carinata HOM05D004654 ORTHO05D005414 4.1e-13 79.0 158 39.2
C02p21610 Brassica napus HOM05D004654 ORTHO05D005414 4.1e-13 79.0 158 39.2
HanXRQChr16g0532651 Helianthus annuus HOM05D004654 ORTHO05D005414 4.1e-13 79.0 156 41.0
AL2G22850 Arabidopsis lyrata HOM05D004654 ORTHO05D005414 5.4e-13 78.6 162 42.0
Peaxi162Scf00918g00026 Petunia axillaris HOM05D004654 ORTHO05D005414 5.4e-13 78.6 195 35.9
C06p39170 Brassica napus HOM05D004654 ORTHO05D005414 1.6e-12 77.0 183 35.5
CiPaw.07G102900 Carya illinoinensis HOM05D004654 ORTHO05D005414 1.6e-12 77.0 181 37.0
Manes.02G082600 Manihot esculenta HOM05D004654 ORTHO05D005414 1.6e-12 77.0 190 36.3
ECA246G3021 Erigeron canadensis HOM05D004654 ORTHO05D005414 2.0e-12 76.6 166 38.6
CARHR057580 Cardamine hirsuta HOM05D004654 ORTHO05D005414 3.5e-12 75.9 167 36.5
HanXRQChr15g0486441 Helianthus annuus HOM05D004654 ORTHO05D005414 3.5e-12 75.9 153 37.3
AT1G65720 Arabidopsis thaliana HOM05D004654 ORTHO05D005414 4.5e-12 75.5 162 39.5
Oeu034013.1 Olea europaea HOM05D004654 ORTHO05D005414 4.5e-12 75.5 175 34.9
Sopen03g005810 Solanum pennellii HOM05D004654 ORTHO05D005414 4.5e-12 75.5 203 34.0
GSVIVG01005258001 Vitis vinifera HOM05D004654 ORTHO05D005414 4.5e-12 75.5 156 40.4
Gohir.D12G051600 Gossypium hirsutum HOM05D004654 ORTHO05D005414 5.9e-12 75.1 143 38.5
unitig_578.g16656 Utricularia gibba HOM05D004654 ORTHO05D005414 5.9e-12 75.1 71 56.3
COL.COLO4_00809 Corchorus olitorius HOM05D004654 ORTHO05D005414 7.7e-12 74.7 143 38.5
Gorai.008G054900 Gossypium raimondii HOM05D004654 ORTHO05D005414 7.7e-12 74.7 144 37.5
unitig_85.g27201 Utricularia gibba HOM05D004654 ORTHO05D005414 1.0e-11 74.3 123 41.5
Duzib138G0480 Durio zibethinus HOM05D004654 ORTHO05D005414 1.3e-11 73.9 145 40.0
FAN19G2236 Fragaria x ananassa HOM05D004654 ORTHO05D005414 1.3e-11 73.9 159 39.0
Manes.01G125100 Manihot esculenta HOM05D004654 ORTHO05D005414 1.3e-11 73.9 189 37.0
Nitab4.5_0008713g0040 Nicotiana tabacum HOM05D004654 ORTHO05D005414 1.3e-11 73.9 200 34.5
Actinidia17131 Actinidia chinensis HOM05D004654 ORTHO05D005414 2.2e-11 73.2 202 34.2
BolC2t08298H Brassica oleracea HOM05D004654 ORTHO05D005414 2.2e-11 73.2 156 37.8
Carub.0002s1154 Capsella rubella HOM05D004654 ORTHO05D005414 2.2e-11 73.2 179 36.3
Solyc03g031950.3 Solanum lycopersicum HOM05D004654 ORTHO05D005414 2.2e-11 73.2 203 33.5
vmacro20421 Vaccinium macrocarpon HOM05D004654 ORTHO05D005414 2.2e-11 73.2 195 33.8
FAN26G0407 Fragaria x ananassa HOM05D004654 ORTHO05D005414 2.9e-11 72.8 156 38.5
arahy.Tifrunner.gnm1.ann1.C1RHT9 Arachis hypogaea HOM05D004654 ORTHO05D005414 3.8e-11 72.4 156 35.9
FAN28G0174 Fragaria x ananassa HOM05D004654 ORTHO05D005414 3.8e-11 72.4 159 38.4
PGSC0003DMG400024083 Solanum tuberosum HOM05D004654 ORTHO05D005414 3.8e-11 72.4 203 33.5
Eucgr.F02926 Eucalyptus grandis HOM05D004654 ORTHO05D005414 5.0e-11 72.0 91 45.1
Gohir.A12G053100 Gossypium hirsutum HOM05D004654 ORTHO05D005414 5.0e-11 72.0 144 37.5
Thecc.04G056200 Theobroma cacao HOM05D004654 ORTHO05D005414 5.0e-11 72.0 137 40.1
CiPaw.13G067300 Carya illinoinensis HOM05D004654 ORTHO05D005414 6.5e-11 71.6 181 34.8
CDE04G3704 Ceratophyllum demersum HOM05D004654 ORTHO05D005414 6.5e-11 71.6 182 35.7
DCAR_000947 Daucus carota HOM05D004654 ORTHO05D005414 6.5e-11 71.6 113 43.4
Potri.017G142100 Populus trichocarpa HOM05D004654 ORTHO05D005414 6.5e-11 71.6 183 38.3
Cc07_g12430 Coffea canephora HOM05D004654 ORTHO05D005414 8.5e-11 71.2 206 32.0
Aa31LG2G2610 Aethionema arabicum HOM05D004654 ORTHO05D005414 1.1e-10 70.9 173 37.0
Dinv28280 Davidia involucrata HOM05D004654 ORTHO05D005414 1.1e-10 70.9 185 34.1
Thhalv10019176m.g Eutrema salsugineum HOM05D004654 ORTHO05D005414 1.1e-10 70.9 184 37.0
FAN28G0874 Fragaria x ananassa HOM05D004654 ORTHO05D005414 1.1e-10 70.9 159 38.4
Gohir.D08G048300 Gossypium hirsutum HOM05D004654 ORTHO05D005414 1.1e-10 70.9 170 38.2
Gorai.004G047800 Gossypium raimondii HOM05D004654 ORTHO05D005414 1.1e-10 70.9 170 38.2
Actinidia35698 Actinidia chinensis HOM05D004654 ORTHO05D005414 1.5e-10 70.5 188 30.9
A02p13350 Brassica napus HOM05D004654 ORTHO05D005414 1.5e-10 70.5 146 37.7
PGR004G1881 Punica granatum HOM05D004654 ORTHO05D005414 1.5e-10 70.5 169 33.1
Cfa008008 Carpinus fangiana HOM05D004654 ORTHO05D005414 1.9e-10 70.1 179 37.4
CiPaw.03G260700 Carya illinoinensis HOM05D004654 ORTHO05D005414 1.9e-10 70.1 166 38.6
Sabra17G0119000 Salix brachista HOM05D004654 ORTHO05D005414 1.9e-10 70.1 181 35.9
PGSC0003DMG400037923 Solanum tuberosum HOM05D004654 ORTHO05D005414 2.5e-10 69.7 187 31.0
SGA_v2.0_scaffold8G04582 Striga asiatica HOM05D004654 ORTHO05D005414 2.5e-10 69.7 150 35.3
BraA02t06392Z Brassica rapa HOM05D004654 ORTHO05D005414 3.2e-10 69.3 145 37.2
CiPaw.03G008900 Carya illinoinensis HOM05D004654 ORTHO05D005414 3.2e-10 69.3 188 36.7
Haze_14051 Corylus avellana HOM05D004654 ORTHO05D005414 3.2e-10 69.3 183 35.5
Glyma.18G046900 Glycine max HOM05D004654 ORTHO05D005414 3.2e-10 69.3 154 36.4
Gohir.A08G038100 Gossypium hirsutum HOM05D004654 ORTHO05D005414 3.2e-10 69.3 170 36.5
vmacro23510 Vaccinium macrocarpon HOM05D004654 ORTHO05D005414 3.2e-10 69.3 195 33.3
CDE07G1822 Ceratophyllum demersum HOM05D004654 ORTHO05D005414 4.2e-10 68.9 149 35.6
Migut.D00607 Erythranthe guttata HOM05D004654 ORTHO05D005414 4.2e-10 68.9 157 36.9
Lj6g0008387 Lotus japonicus HOM05D004654 ORTHO05D005414 4.2e-10 68.9 176 35.2
PSO566G0049 Papaver somniferum HOM05D004654 ORTHO05D005414 4.2e-10 68.9 210 33.8
PSO566G0349 Papaver somniferum HOM05D004654 ORTHO05D005414 4.2e-10 68.9 210 33.8
Ciclev10012875m.g Citrus clementina HOM05D004654 ORTHO05D005414 1.2e-09 67.4 167 37.7
Glyma.11G204100 Glycine max HOM05D004654 ORTHO05D005414 1.2e-09 67.4 153 38.6
PSO782G3544 Papaver somniferum HOM05D004654 ORTHO05D005414 1.6e-09 67.0 210 33.3
Sed0014762 Sechium edule HOM05D004654 ORTHO05D005414 1.6e-09 67.0 184 37.0
QL02p054970 Quercus lobata HOM05D004654 ORTHO05D005414 2.1e-09 66.6 183 35.5
QL02p056026 Quercus lobata HOM05D004654 ORTHO05D005414 2.1e-09 66.6 183 35.5
Prupe.3G011600 Prunus persica HOM05D004654 ORTHO05D005414 2.7e-09 66.2 173 35.8
Phvul.006G084100 Phaseolus vulgaris HOM05D004654 ORTHO05D005414 4.7e-09 65.5 152 40.1
Potri.004G078500 Populus trichocarpa HOM05D004654 ORTHO05D005414 4.7e-09 65.5 185 33.5
Hma1.2p1_0085F.1_g044140 Hydrangea macrophylla HOM05D004654 ORTHO05D005414 6.1e-09 65.1 206 31.6
MD17G1272400 Malus domestica HOM05D004654 ORTHO05D005414 6.1e-09 65.1 178 32.6
THA.LOC104822158 Tarenaya hassleriana HOM05D004654 ORTHO05D005414 6.1e-09 65.1 168 34.5
Aqoxy5G02573 Aquilegia oxysepala HOM05D004654 ORTHO05D005414 8.0e-09 64.7 71 49.3
arahy.Tifrunner.gnm1.ann1.70EH4T Arachis hypogaea HOM05D004654 ORTHO05D005414 8.0e-09 64.7 169 33.7
CsaV3_3G021140 Cucumis sativus L. HOM05D004654 ORTHO05D005414 8.0e-09 64.7 184 35.3
Sabra04G0052000 Salix brachista HOM05D004654 ORTHO05D005414 8.0e-09 64.7 187 33.2
VMungo0540G1596 Vigna mungo HOM05D004654 ORTHO05D005414 8.0e-09 64.7 151 38.4
Cpa.g.sc108.18 Carica papaya HOM05D004654 ORTHO05D005414 1.0e-08 64.3 183 36.6
ClCG05G011320 Citrullus lanatus HOM05D004654 ORTHO05D005414 1.0e-08 64.3 198 32.3
Hma1.2p1_2924F.1_g330430 Hydrangea macrophylla HOM05D004654 ORTHO05D005414 1.0e-08 64.3 208 31.2
MBI03_g05124_MAGBIO Magnolia biondii HOM05D004654 ORTHO05D005414 1.0e-08 64.3 78 46.2
MBI03_g34062_MAGBIO Magnolia biondii HOM05D004654 ORTHO05D005414 1.0e-08 64.3 78 46.2
SGA_v2.0_scaffold247G44889 Striga asiatica HOM05D004654 ORTHO05D005414 1.0e-08 64.3 106 44.3
THA.LOC104823831 Tarenaya hassleriana HOM05D004654 ORTHO05D005414 1.0e-08 64.3 176 35.8
MD09G1282600 Malus domestica HOM05D004654 ORTHO05D005414 1.4e-08 63.9 170 31.8
THA.LOC104805666 Tarenaya hassleriana HOM05D004654 ORTHO05D005414 1.4e-08 63.9 72 52.8
arahy.Tifrunner.gnm1.ann1.6F687N Arachis hypogaea HOM05D004654 ORTHO05D005414 2.3e-08 63.2 169 33.1
CANSAT78G0950 Cannabis sativa HOM05D004654 ORTHO05D005414 4.0e-08 62.4 198 31.3
Psat5g143960 Pisum sativum HOM05D004654 ORTHO05D005414 4.0e-08 62.4 159 36.5
Lalb_Chr20g0117181 Lupinus albus HOM05D004654 ORTHO05D005414 5.2e-08 62.0 67 55.2
Hma1.2p1_0034F.1_g021540 Hydrangea macrophylla HOM05D004654 ORTHO05D005414 8.8e-08 61.2 186 31.2
Os03g0110300 Oryza sativa ssp. japonica HOM05D004654 ORTHO05D005414 8.8e-08 61.2 83 41.0
MELO3C020251.2 Cucumis melo HOM05D004654 ORTHO05D005414 1.5e-07 60.5 184 34.2
TPR.G37307 Trifolium pratense HOM05D004654 ORTHO05D005414 2.0e-07 60.1 162 34.0
unitig_90.g27472 Utricularia gibba HOM05D004654 ORTHO05D005414 2.0e-07 60.1 157 36.3
ATR0618G257 Amborella trichopoda HOM05D004654 ORTHO05D005414 2.6e-07 59.7 107 35.5
Ca_15106_v3 Cicer arietinum L. HOM05D004654 ORTHO05D005414 3.4e-07 59.3 177 33.9
HPP92_007306 Vanilla planifolia HOM05D004654 ORTHO05D005414 3.4e-07 59.3 78 43.6
Os10g0483900 Oryza sativa ssp. japonica HOM05D004654 ORTHO05D005414 4.4e-07 58.9 75 42.7
Peaxi162Scf00784g00044 Petunia axillaris HOM05D004654 ORTHO05D005414 4.4e-07 58.9 58 46.6
arahy.Tifrunner.gnm1.ann1.RSI5EI Arachis hypogaea HOM05D004654 ORTHO05D005414 9.8e-07 57.8 176 33.5
FAN23G2643 Fragaria x ananassa HOM05D004654 ORTHO05D005414 1.3e-06 57.4 130 37.7
Gohir.A04G103050 Gossypium hirsutum HOM05D004654 ORTHO05D005414 1.3e-06 57.4 56 50.0
Medtr3g064040 Medicago truncatula HOM05D004654 ORTHO05D005414 2.8e-06 56.2 162 37.0
TAR622G1006 Trochodendron aralioides HOM05D004654 ORTHO05D005414 2.8e-06 56.2 176 31.8
Atru.chr1.2194 Acer truncatum HOM05D004654 ORTHO05D005414 4.9e-06 55.5 156 35.3
Ah.04g162850 Amaranthus hybridus HOM05D004654 ORTHO05D005414 4.9e-06 55.5 211 28.9
HPP92_022519 Vanilla planifolia HOM05D004654 ORTHO05D005414 4.9e-06 55.5 148 29.7
Nn4g24900 Nelumbo nucifera HOM05D004654 ORTHO05D005414 8.3e-06 54.7 130 33.1


User provided reference genes

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