Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 4.0e-75 284.6 142 100.0
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 4.0e-75 284.6 142 100.0
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 1.8e-19 99.8 122 52.5
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 3.1e-19 99.0 133 48.9
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 3.5e-18 95.5 117 55.6
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 7.7e-18 94.4 113 55.8
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 7.7e-18 94.4 141 48.2
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 1.7e-17 93.2 123 52.8
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.7e-17 93.2 123 52.8
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 1.7e-17 93.2 120 51.7
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 2.9e-17 92.4 133 42.9
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 3.8e-17 92.0 133 50.4
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 5.0e-17 91.7 122 52.5
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 1.1e-16 90.5 140 49.3
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 2.5e-16 89.4 120 54.2
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 2.5e-16 89.4 134 43.3
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 3.3e-16 89.0 113 52.2
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 3.3e-16 89.0 130 46.2
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 3.3e-16 89.0 133 43.6
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 4.2e-16 88.6 123 52.0
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 7.2e-16 87.8 119 49.6
Sed0019252 Sechium edule HOM05D007735 ORTHO05D009638 2.8e-15 85.9 109 52.3
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 3.6e-15 85.5 127 48.0
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 1.4e-14 83.6 103 51.5
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 3.0e-14 82.4 136 41.9
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 5.2e-14 81.6 121 48.8
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 6.8e-14 81.3 107 48.6
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 8.9e-14 80.9 122 50.0
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 1.2e-13 80.5 125 44.8
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 1.2e-13 80.5 124 50.0
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 1.5e-13 80.1 111 50.5
ClCG10G000110 Citrullus lanatus HOM05D007735 ORTHO05D009638 2.0e-13 79.7 108 47.2
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 2.0e-13 79.7 108 47.2
FAN23G2983 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.6e-13 79.3 111 51.4
FAN26G0974 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.6e-13 79.3 111 51.4
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 3.4e-13 79.0 106 47.2
Oeu045753.2 Olea europaea HOM05D007735 ORTHO05D009638 5.7e-13 78.2 107 44.9
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 1.3e-12 77.0 124 41.9
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 1.7e-12 76.6 124 41.9
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 1.7e-12 76.6 125 40.8
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 2.2e-12 76.3 106 42.5
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 3.7e-12 75.5 125 42.4
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 3.7e-12 75.5 141 46.1
PGSC0003DMG400015147 Solanum tuberosum HOM05D007735 ORTHO05D009638 3.7e-12 75.5 104 44.2
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 4.9e-12 75.1 111 48.6
Lalb_Chr09g0324871 Lupinus albus HOM05D007735 ORTHO05D009638 1.4e-11 73.6 121 38.8
Oeu043409.2 Olea europaea HOM05D007735 ORTHO05D009638 1.4e-11 73.6 109 46.8
Sabra11G0130300 Salix brachista HOM05D007735 ORTHO05D009638 1.4e-11 73.6 125 46.4
CsaV3_3G000130 Cucumis sativus L. HOM05D007735 ORTHO05D009638 2.4e-11 72.8 108 48.1
CsaV3_UNG155170 Cucumis sativus L. HOM05D007735 ORTHO05D009638 2.4e-11 72.8 108 48.1
Eucgr.I02199 Eucalyptus grandis HOM05D007735 ORTHO05D009638 2.4e-11 72.8 143 44.8
COL.COLO4_22568 Corchorus olitorius HOM05D007735 ORTHO05D009638 3.1e-11 72.4 127 47.2
MELO3C013706.2 Cucumis melo HOM05D007735 ORTHO05D009638 4.1e-11 72.0 109 45.9
CiPaw.07G000500 Carya illinoinensis HOM05D007735 ORTHO05D009638 1.2e-10 70.5 108 46.3
Gohir.D04G020900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 2.0e-10 69.7 106 50.9
Gorai.012G025100 Gossypium raimondii HOM05D007735 ORTHO05D009638 2.0e-10 69.7 106 50.9
Migut.H02270 Erythranthe guttata HOM05D007735 ORTHO05D009638 2.7e-10 69.3 134 41.0
SGA_v2.0_scaffold108G30951 Striga asiatica HOM05D007735 ORTHO05D009638 2.7e-10 69.3 135 36.3
Eucgr.J02566 Eucalyptus grandis HOM05D007735 ORTHO05D009638 3.5e-10 68.9 159 39.0
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 3.5e-10 68.9 135 40.0
Gohir.A05G393900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 4.5e-10 68.6 106 50.0
Migut.H02268 Erythranthe guttata HOM05D007735 ORTHO05D009638 5.9e-10 68.2 129 42.6
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 7.8e-10 67.8 111 40.5
PGSC0003DMG400018690 Solanum tuberosum HOM05D007735 ORTHO05D009638 1.0e-09 67.4 112 42.0
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.7e-09 66.6 127 41.7
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 1.7e-09 66.6 122 41.0
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 2.3e-09 66.2 111 39.6
Medtr5g024910 Medicago truncatula HOM05D007735 ORTHO05D009638 2.3e-09 66.2 129 35.7
SGA_v2.0_scaffold2G00933 Striga asiatica HOM05D007735 ORTHO05D009638 2.3e-09 66.2 110 42.7
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 2.9e-09 65.9 134 35.1
TPR.G33757 Trifolium pratense HOM05D001957 ORTHO05D002015 3.8e-09 65.5 129 36.4
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 6.6e-09 64.7 104 42.3
Cpa.g.sc6.350 Carica papaya HOM05D007735 ORTHO05D009638 8.6e-09 64.3 109 43.1
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 8.6e-09 64.3 118 36.4
Psat2g147360 Pisum sativum HOM05D007735 ORTHO05D009638 8.6e-09 64.3 132 36.4
Ca_25020_v3 Cicer arietinum L. HOM05D007735 ORTHO05D009638 1.1e-08 63.9 126 38.1
arahy.Tifrunner.gnm1.ann1.Q37N58 Arachis hypogaea HOM05D007735 ORTHO05D009638 2.5e-08 62.8 106 41.5
arahy.Tifrunner.gnm1.ann1.S9U9HD Arachis hypogaea HOM05D007735 ORTHO05D009638 2.5e-08 62.8 106 41.5
CiPaw.07G132500 Carya illinoinensis HOM05D007735 ORTHO05D009638 1.6e-07 60.1 124 38.7
Lj2g0017807 Lotus japonicus HOM05D007735 ORTHO05D009638 1.6e-07 60.1 143 35.7
Medtr8g072610 Medicago truncatula HOM05D007735 ORTHO05D009638 1.6e-07 60.1 128 35.2
Haze_22869 Corylus avellana HOM05D007735 ORTHO05D009638 2.8e-07 59.3 126 38.1
Nitab4.5_0004507g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 3.6e-07 58.9 114 37.7
Psat4g107200 Pisum sativum HOM05D007735 ORTHO05D009638 4.7e-07 58.5 121 37.2
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 6.1e-07 58.2 122 34.4
Atru.chr3.61 Acer truncatum HOM05D007735 ORTHO05D009638 4.0e-06 55.5 47 66.0
LjContig00247g0020335 Lotus japonicus HOM05D007735 ORTHO05D009638 5.2e-06 55.1 123 37.4
HPP92_018844 Vanilla planifolia HOM05D026889 ORTHO05D009638 5.2e-06 55.1 110 37.3
HPP92_018900 Vanilla planifolia HOM05D026889 ORTHO05D009638 5.2e-06 55.1 110 37.3


User provided reference genes

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