Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 1.5e-57 226.1 125 100.0
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 3.3e-12 75.5 55 83.6
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 1.6e-11 73.2 55 74.5
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 3.6e-11 72.0 55 80.0
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 3.6e-11 72.0 55 69.1
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 3.6e-11 72.0 55 69.1
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 3.6e-11 72.0 55 72.7
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 3.6e-11 72.0 55 72.7
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 3.6e-11 72.0 55 70.9
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 3.6e-11 72.0 55 70.9
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 4.7e-11 71.6 55 70.9
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 4.7e-11 71.6 55 78.2
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.1e-10 70.5 55 70.9
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.8e-10 69.7 57 71.9
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 3.1e-10 68.9 55 67.3
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 3.1e-10 68.9 55 67.3
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 4.0e-10 68.6 55 70.9
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 8.9e-10 67.4 55 78.2
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 1.2e-09 67.0 55 65.5
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.2e-09 67.0 55 81.8
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.2e-09 67.0 55 67.3
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.2e-09 67.0 57 68.4
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.2e-09 67.0 57 68.4
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.5e-09 66.6 55 60.0
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 2.0e-09 66.2 55 60.0
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 2.0e-09 66.2 55 60.0
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 2.0e-09 66.2 55 60.0
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 2.0e-09 66.2 55 61.8
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 2.0e-09 66.2 54 72.2
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 2.6e-09 65.9 55 65.5
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 3.4e-09 65.5 55 85.5
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 3.4e-09 65.5 55 85.5
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 3.4e-09 65.5 55 85.5
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 3.4e-09 65.5 56 67.9
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 5.8e-09 64.7 61 73.8
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 5.8e-09 64.7 61 73.8
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 5.8e-09 64.7 55 76.4
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 7.5e-09 64.3 55 58.2
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 7.5e-09 64.3 56 64.3
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 9.9e-09 63.9 54 85.2
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 1.3e-08 63.5 55 63.6
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 1.3e-08 63.5 55 80.0
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 1.3e-08 63.5 55 80.0
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 1.7e-08 63.2 55 83.6
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.7e-08 63.2 55 69.1
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 1.7e-08 63.2 55 56.4
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 1.7e-08 63.2 55 78.2
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 1.7e-08 63.2 55 76.4
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 1.7e-08 63.2 54 63.0
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 2.9e-08 62.4 58 58.6
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 3.7e-08 62.0 61 57.4
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 3.7e-08 62.0 56 64.3
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 3.7e-08 62.0 53 62.3
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 3.7e-08 62.0 55 78.2
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 3.7e-08 62.0 57 57.9
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 3.7e-08 62.0 55 54.5
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 3.7e-08 62.0 52 80.8
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 4.9e-08 61.6 51 74.5
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 8.3e-08 60.8 62 67.7
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 8.3e-08 60.8 55 67.3
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 1.1e-07 60.5 55 67.3
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 1.4e-07 60.1 56 67.9
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 1.9e-07 59.7 57 56.1
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 2.4e-07 59.3 49 71.4
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 2.4e-07 59.3 55 76.4
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 4.1e-07 58.5 56 71.4
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 4.1e-07 58.5 55 65.5
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 4.1e-07 58.5 54 59.3
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 5.4e-07 58.2 56 71.4
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 5.4e-07 58.2 55 65.5
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 7.1e-07 57.8 55 61.8
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 2.7e-06 55.8 55 76.4
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 3.5e-06 55.5 59 57.6
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 7.8e-06 54.3 62 59.7
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 7.8e-06 54.3 49 67.3


User provided reference genes

Program Settings