Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014106 Daucus carota HOM05D003443 ORTHO05D008640 6.2e-74 280.8 150 100.0
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 2.9e-39 165.6 145 66.2
CSS0034050 Camellia sinensis var. sinensis HOM05D003443 ORTHO05D008640 1.1e-38 163.7 145 63.4
Actinidia23064 Actinidia chinensis HOM05D003443 ORTHO05D008640 2.7e-37 159.1 147 59.9
Manes.18G075200 Manihot esculenta HOM05D003443 ORTHO05D008640 2.3e-36 156.0 140 62.9
Actinidia02607 Actinidia chinensis HOM05D003443 ORTHO05D008640 3.3e-35 152.1 145 60.7
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 3.3e-35 152.1 140 61.4
Cpa.g.sc70.11 Carica papaya HOM05D003443 ORTHO05D008640 5.6e-35 151.4 139 64.7
CiPaw.05G224500 Carya illinoinensis HOM05D003443 ORTHO05D008640 5.6e-35 151.4 140 59.3
RcHm_v2.0_Chr6g0295401 Rosa chinensis HOM05D003443 ORTHO05D008640 1.6e-34 149.8 141 58.9
Atru.chr13.1408 Acer truncatum HOM05D003443 ORTHO05D008640 3.7e-34 148.7 140 60.0
FAN24G2127 Fragaria x ananassa HOM05D003443 ORTHO05D008640 4.8e-34 148.3 141 58.9
AL6G41970 Arabidopsis lyrata HOM05D003443 ORTHO05D008640 6.2e-34 147.9 142 57.7
Sabra02G0067600 Salix brachista HOM05D003443 ORTHO05D008640 6.2e-34 147.9 139 61.2
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 1.8e-33 146.4 141 59.6
THA.LOC104817138 Tarenaya hassleriana HOM05D003443 ORTHO05D008640 3.1e-33 145.6 139 59.0
Thecc.08G121300 Theobroma cacao HOM05D003443 ORTHO05D008640 3.1e-33 145.6 142 60.6
Potri.002G086200 Populus trichocarpa HOM05D003443 ORTHO05D008640 5.3e-33 144.8 139 58.3
QL08p024382 Quercus lobata HOM05D003443 ORTHO05D008640 5.3e-33 144.8 143 57.3
FvH4_2g26530 Fragaria vesca HOM05D003443 ORTHO05D008640 6.9e-33 144.4 141 58.2
MD15G1353300 Malus domestica HOM05D003443 ORTHO05D008640 6.9e-33 144.4 141 58.2
Ciclev10002759m.g Citrus clementina HOM05D003443 ORTHO05D008640 9.0e-33 144.1 140 60.0
MD03G1200300 Malus domestica HOM05D003443 ORTHO05D008640 9.0e-33 144.1 141 58.2
FAN15G0021 Fragaria x ananassa HOM05D003443 ORTHO05D008640 1.5e-32 143.3 141 58.2
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 1.5e-32 143.3 139 58.3
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 1.5e-32 143.3 139 61.2
FAN27G2419 Fragaria x ananassa HOM05D003443 ORTHO05D008640 2.0e-32 142.9 141 57.4
Nn4g26023 Nelumbo nucifera HOM05D003443 ORTHO05D008640 2.0e-32 142.9 139 60.4
PSO170G0931 Papaver somniferum HOM05D003443 ORTHO05D008640 2.0e-32 142.9 147 58.5
Haze_00480 Corylus avellana HOM05D003443 ORTHO05D008640 2.6e-32 142.5 144 56.9
Prupe.1G501600 Prunus persica HOM05D003443 ORTHO05D008640 3.4e-32 142.1 141 58.2
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 4.5e-32 141.7 139 60.4
Hma1.2p1_0073F.1_g038390 Hydrangea macrophylla HOM05D003443 ORTHO05D008640 4.5e-32 141.7 133 63.9
AUR62004720 Chenopodium quinoa HOM05D003443 ORTHO05D008640 5.8e-32 141.4 139 55.4
arahy.Tifrunner.gnm1.ann1.ZIXY5S Arachis hypogaea HOM05D003443 ORTHO05D008640 9.9e-32 140.6 142 55.6
Ca_26970_v3 Cicer arietinum L. HOM05D003443 ORTHO05D008640 9.9e-32 140.6 134 61.2
AT4G08240 Arabidopsis thaliana HOM05D003443 ORTHO05D008640 1.7e-31 139.8 142 54.9
Psat2g087720 Pisum sativum HOM05D003443 ORTHO05D008640 2.2e-31 139.4 136 59.6
Medtr5g058660 Medicago truncatula HOM05D003443 ORTHO05D008640 2.9e-31 139.0 133 56.4
Medtr5g059030 Medicago truncatula HOM05D003443 ORTHO05D008640 2.9e-31 139.0 133 56.4
Sc01g0001350 Simmondsia chinensis HOM05D003443 ORTHO05D008640 2.9e-31 139.0 139 54.0
arahy.Tifrunner.gnm1.ann1.B00VWE Arachis hypogaea HOM05D003443 ORTHO05D008640 4.9e-31 138.3 134 56.7
Sp6g09810 Schrenkiella parvula HOM05D003443 ORTHO05D008640 4.9e-31 138.3 139 56.8
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 1.4e-30 136.7 133 58.6
Carub.0006s2677 Capsella rubella HOM05D003443 ORTHO05D008640 1.9e-30 136.3 142 52.8
vmacro12548 Vaccinium macrocarpon HOM05D003443 ORTHO05D008640 3.2e-30 135.6 146 53.4
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 4.2e-30 135.2 133 56.4
Aa31LG9G14320 Aethionema arabicum HOM05D003443 ORTHO05D008640 9.3e-30 134.0 139 55.4
Nitab4.5_0001926g0050 Nicotiana tabacum HOM05D003443 ORTHO05D008640 2.1e-29 132.9 142 53.5
CARHR259340 Cardamine hirsuta HOM05D003443 ORTHO05D008640 2.7e-29 132.5 142 54.9
Lalb_Chr10g0101911 Lupinus albus HOM05D003443 ORTHO05D008640 2.7e-29 132.5 135 57.8
Nitab4.5_0002883g0010 Nicotiana tabacum HOM05D003443 ORTHO05D008640 2.7e-29 132.5 140 55.7
Cc10_g11000 Coffea canephora HOM05D003443 ORTHO05D008640 4.6e-29 131.7 141 54.6
BcaB01g02870 Brassica carinata HOM05D003443 ORTHO05D008640 7.9e-29 131.0 139 51.1
CAN.G513.1 Capsicum annuum HOM05D003443 ORTHO05D008640 1.0e-28 130.6 133 55.6
Rhsim06G0105400 Rhododendron simsii HOM05D003443 ORTHO05D008640 1.0e-28 130.6 145 54.5
Thhalv10029053m.g Eutrema salsugineum HOM05D003443 ORTHO05D008640 1.8e-28 129.8 139 54.7
PGSC0003DMG400000906 Solanum tuberosum HOM05D003443 ORTHO05D008640 1.8e-28 129.8 140 52.9
Solyc11g013020.2 Solanum lycopersicum HOM05D003443 ORTHO05D008640 2.3e-28 129.4 140 52.9
Sopen11g007760 Solanum pennellii HOM05D003443 ORTHO05D008640 3.0e-28 129.0 140 52.9
CANSAT25G1680 Cannabis sativa HOM05D003443 ORTHO05D008640 1.5e-27 126.7 140 52.1
BraA03t12014Z Brassica rapa HOM05D003443 ORTHO05D008640 1.9e-27 126.3 139 52.5
MELO3C011587.2 Cucumis melo HOM05D003443 ORTHO05D008640 2.5e-27 125.9 150 51.3
Migut.C01148 Erythranthe guttata HOM05D003443 ORTHO05D008640 2.5e-27 125.9 137 53.3
SGA_v2.0_scaffold52G18981 Striga asiatica HOM05D003443 ORTHO05D008640 3.3e-27 125.6 136 52.9
MBI06_g44272_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 4.3e-27 125.2 141 57.4
MBI15_g35999_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 4.3e-27 125.2 141 57.4
Peaxi162Scf00395g00717 Petunia axillaris HOM05D003443 ORTHO05D008640 5.6e-27 124.8 140 51.4
Lj1g0013808 Lotus japonicus HOM05D003443 ORTHO05D008640 9.6e-27 124.0 133 51.9
MD08G1167900 Malus domestica HOM05D003443 ORTHO05D008640 9.6e-27 124.0 141 53.9
A03p27990 Brassica napus HOM05D003443 ORTHO05D008640 1.6e-26 123.2 139 50.4
CsaV3_6G003590 Cucumis sativus L. HOM05D003443 ORTHO05D008640 1.6e-26 123.2 150 50.0
BcaC01g04776 Brassica carinata HOM05D003443 ORTHO05D008640 3.7e-26 122.1 139 50.4
C03p33840 Brassica napus HOM05D003443 ORTHO05D008640 3.7e-26 122.1 139 50.4
BolC3t15700H Brassica oleracea HOM05D003443 ORTHO05D008640 3.7e-26 122.1 139 50.4
Peaxi162Scf00198g00098 Petunia axillaris HOM05D003443 ORTHO05D008640 8.2e-26 120.9 140 50.0
SalBow7G4791 Salvia bowleyana HOM05D003443 ORTHO05D008640 8.2e-26 120.9 132 50.8
MELO3C011304.2 Cucumis melo HOM05D003443 ORTHO05D008640 2.4e-25 119.4 162 48.1
SalBow7G2413 Salvia bowleyana HOM05D003443 ORTHO05D008640 4.0e-25 118.6 132 50.0
Sed0028054 Sechium edule HOM05D003443 ORTHO05D008640 9.0e-25 117.5 146 47.3
MSTRG.1460 Avicennia marina HOM05D003443 ORTHO05D008640 3.4e-24 115.5 137 48.2
ECA232G0443 Erigeron canadensis HOM05D003443 ORTHO05D008640 4.5e-24 115.2 135 49.6
HPP92_002301 Vanilla planifolia HOM05D003443 ORTHO05D008640 4.5e-24 115.2 129 51.9
Aqoxy6G00163 Aquilegia oxysepala HOM05D003443 ORTHO05D008640 1.7e-23 113.2 133 51.9
AUR62023639 Chenopodium quinoa HOM05D003443 ORTHO05D008640 1.1e-22 110.5 134 46.3
ATR0121G005 Amborella trichopoda HOM05D003443 ORTHO05D008640 3.2e-22 109.0 129 52.7
Hund27039 Selenicereus undatus HOM05D003443 ORTHO05D008640 9.3e-22 107.5 218 36.2
Lsat_1_v5_gn_4_136221 Lactuca sativa HOM05D003443 ORTHO05D008640 3.5e-21 105.5 139 44.6
unitig_747.g21488 Utricularia gibba HOM05D003443 ORTHO05D008640 3.5e-21 105.5 131 47.3
PGR044G0044 Punica granatum HOM05D003443 ORTHO05D008640 7.9e-21 104.4 134 50.0
HanXRQChr09g0254131 Helianthus annuus HOM05D003443 ORTHO05D008640 1.8e-20 103.2 132 45.5
TAR628G1666 Trochodendron aralioides HOM05D003443 ORTHO05D008640 3.9e-20 102.1 79 62.0
TPR.G8499 Trifolium pratense HOM05D028375 ORTHO05D008640 9.7e-19 97.4 129 48.8
CDE08G0113 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 1.6e-18 96.7 116 50.0
Ah.16g110170 Amaranthus hybridus HOM05D003443 ORTHO05D008640 2.8e-18 95.9 76 57.9
Oeu047933.1 Olea europaea HOM05D003443 ORTHO05D008640 3.7e-18 95.5 156 40.4
Phvul.008G165400 Phaseolus vulgaris HOM05D003443 ORTHO05D008640 1.4e-17 93.6 133 44.4
TWI12G0841 Tripterygium wilfordii HOM05D003443 ORTHO05D008640 4.1e-17 92.0 76 57.9
Eucgr.L01689 Eucalyptus grandis HOM05D003443 ORTHO05D008640 5.3e-17 91.7 85 58.8
Duzib093G0610 Durio zibethinus HOM05D003443 ORTHO05D008640 1.2e-16 90.5 139 46.8
CDE06G0537 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 1.0e-15 87.4 116 44.8
Os02g0567000 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D008640 2.2e-15 86.3 129 45.7
SEGI_04119 Sequoiadendron giganteum HOM05D003443 ORTHO05D008640 2.2e-15 86.3 126 43.7
Zm00001eb244530 Zea mays HOM05D003443 ORTHO05D008640 2.2e-15 86.3 128 43.8
ClCG08G005410 Citrullus lanatus HOM05D003443 ORTHO05D008640 6.5e-15 84.7 211 33.6
Cfa009666 Carpinus fangiana HOM05D003443 ORTHO05D008640 1.4e-14 83.6 82 54.9
Migut.G00969 Erythranthe guttata HOM05D003443 ORTHO05D008640 1.4e-14 83.6 142 38.7
Mapoly0161s0025 Marchantia polymorpha HOM05D003443 ORTHO05D008640 3.2e-14 82.4 141 36.9
Cpa.g.sc36.31 Carica papaya HOM05D003443 ORTHO05D008640 7.9e-13 77.8 104 48.1
SHI33895 Sapria himalayana HOM05D003443 ORTHO05D008640 1.9e-11 73.2 133 36.8


User provided reference genes

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