Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 9.6e-33 142.9 72 100.0
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 1.7e-29 132.1 67 98.5
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 3.0e-26 121.3 66 89.4
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 3.0e-26 121.3 66 89.4
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 5.1e-26 120.6 67 88.1
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 6.7e-26 120.2 67 86.6
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 8.7e-26 119.8 66 87.9
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 1.1e-25 119.4 64 90.6
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 1.1e-25 119.4 64 89.1
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 1.9e-25 118.6 64 90.6
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 1.9e-25 118.6 64 90.6
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 2.5e-25 118.2 64 89.1
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 2.5e-25 118.2 64 90.6
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 4.3e-25 117.5 64 89.1
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 4.3e-25 117.5 64 89.1
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 4.3e-25 117.5 64 89.1
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 4.3e-25 117.5 64 89.1
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 4.3e-25 117.5 64 89.1
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 5.7e-25 117.1 63 90.5
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 7.4e-25 116.7 66 84.8
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 7.4e-25 116.7 67 80.6
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 7.4e-25 116.7 66 84.8
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 7.4e-25 116.7 66 84.8
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 7.4e-25 116.7 62 90.3
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 9.6e-25 116.3 64 87.5
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 1.3e-24 115.9 64 87.5
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 1.3e-24 115.9 64 87.5
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 1.3e-24 115.9 64 87.5
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 1.3e-24 115.9 67 82.1
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 1.3e-24 115.9 64 87.5
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 2.1e-24 115.2 63 88.9
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 2.8e-24 114.8 65 86.2
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 2.8e-24 114.8 64 85.9
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 2.8e-24 114.8 68 85.3
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 2.8e-24 114.8 68 85.3
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 2.8e-24 114.8 68 85.3
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 2.8e-24 114.8 61 86.9
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 3.7e-24 114.4 63 87.3
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 3.7e-24 114.4 66 84.8
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 3.7e-24 114.4 65 83.1
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 3.7e-24 114.4 65 83.1
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 4.8e-24 114.0 64 85.9
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 4.8e-24 114.0 65 87.7
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 4.8e-24 114.0 64 84.4
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 4.8e-24 114.0 63 87.3
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 4.8e-24 114.0 64 85.9
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 6.2e-24 113.6 63 87.3
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 6.2e-24 113.6 64 89.1
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 6.2e-24 113.6 64 85.9
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 6.2e-24 113.6 64 84.4
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 6.2e-24 113.6 66 83.3
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 8.2e-24 113.2 67 80.6
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 8.2e-24 113.2 68 83.8
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 1.1e-23 112.8 62 87.1
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 1.1e-23 112.8 65 83.1
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 1.1e-23 112.8 64 84.4
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 1.4e-23 112.5 64 84.4
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 1.8e-23 112.1 62 85.5
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 1.8e-23 112.1 67 82.1
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 1.8e-23 112.1 64 84.4
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 1.8e-23 112.1 63 85.7
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 1.8e-23 112.1 64 84.4
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 1.8e-23 112.1 63 85.7
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.4e-23 111.7 63 84.1
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.4e-23 111.7 63 84.1
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.4e-23 111.7 63 84.1
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 2.4e-23 111.7 63 85.7
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 2.4e-23 111.7 67 79.1
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 3.1e-23 111.3 61 86.9
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 4.0e-23 110.9 62 85.5
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 4.0e-23 110.9 63 85.7
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 6.9e-23 110.2 64 81.2
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 6.9e-23 110.2 64 81.2
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 6.9e-23 110.2 63 84.1
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 6.9e-23 110.2 62 83.9
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 9.0e-23 109.8 63 79.4
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 9.0e-23 109.8 68 80.9
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 1.2e-22 109.4 67 77.6
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.2e-22 109.4 67 77.6
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.2e-22 109.4 67 77.6
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 1.2e-22 109.4 60 83.3
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 1.2e-22 109.4 63 82.5
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 2.0e-22 108.6 66 80.3
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 2.0e-22 108.6 63 81.0
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 2.6e-22 108.2 64 79.7
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 3.4e-22 107.8 55 94.5
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 3.4e-22 107.8 67 76.1
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 3.4e-22 107.8 62 82.3
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 5.8e-22 107.1 68 76.5
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 5.8e-22 107.1 63 82.5
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 7.6e-22 106.7 67 74.6
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 7.6e-22 106.7 67 74.6
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 7.6e-22 106.7 67 74.6
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 1.3e-21 105.9 64 79.7
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 1.7e-21 105.5 66 77.3
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 2.2e-21 105.1 65 75.4
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 2.9e-21 104.8 65 75.4
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 3.8e-21 104.4 65 73.8
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 3.8e-21 104.4 65 73.8
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 3.8e-21 104.4 66 75.8
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 3.8e-21 104.4 59 81.4
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 3.8e-21 104.4 60 80.0
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 5.0e-21 104.0 65 73.8
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 5.0e-21 104.0 65 73.8
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 5.0e-21 104.0 65 73.8
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 5.0e-21 104.0 65 73.8
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 5.0e-21 104.0 67 74.6
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 8.4e-21 103.2 63 77.8
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 8.4e-21 103.2 65 73.8
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 8.4e-21 103.2 65 73.8
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 8.4e-21 103.2 65 73.8
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 1.4e-20 102.4 66 74.2
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 1.9e-20 102.1 65 73.8
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 1.9e-20 102.1 63 76.2
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 4.2e-20 100.9 59 78.0
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 4.6e-19 97.4 64 71.9
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 1.8e-18 95.5 63 71.4
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 1.8e-15 85.5 55 78.2
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 2.4e-15 85.1 47 80.9
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 2.6e-14 81.6 56 66.1
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 1.3e-13 79.3 65 60.0
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 2.9e-13 78.2 67 58.2
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 2.1e-11 72.0 64 57.8
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 4.6e-11 70.9 64 64.1
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 6.1e-11 70.5 57 59.6
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 1.8e-10 68.9 56 62.5
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 3.0e-10 68.2 47 66.0
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 8.2e-08 60.1 48 58.3
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 8.2e-08 60.1 48 58.3
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 8.2e-08 60.1 48 58.3


User provided reference genes

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