Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 7.0e-119 430.6 219 100.0
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 1.3e-75 287.0 228 67.5
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 4.0e-74 282.0 220 69.5
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 2.0e-73 279.6 223 66.8
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.3e-72 276.9 220 68.2
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 1.7e-72 276.6 222 65.3
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 1.1e-71 273.9 220 67.3
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.9e-71 273.1 222 66.7
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 2.4e-71 272.7 219 67.1
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 2.4e-71 272.7 219 66.7
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 5.5e-71 271.6 219 65.8
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.2e-70 270.4 222 66.7
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 2.1e-70 269.6 220 69.1
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 3.5e-70 268.9 230 63.5
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 4.6e-70 268.5 219 63.9
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 4.6e-70 268.5 221 63.8
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 4.6e-70 268.5 224 64.7
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 1.0e-69 267.3 221 65.2
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 1.0e-69 267.3 227 63.4
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 2.3e-69 266.2 227 64.3
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 2.3e-69 266.2 239 61.5
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 6.7e-69 264.6 222 66.2
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 6.7e-69 264.6 220 64.1
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 6.7e-69 264.6 220 65.9
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.1e-68 263.8 221 66.1
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 1.1e-68 263.8 230 63.0
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 3.3e-68 262.3 220 64.5
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 1.3e-67 260.4 222 63.5
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 1.3e-67 260.4 222 63.5
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 1.6e-67 260.0 221 64.7
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 2.1e-67 259.6 219 65.3
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 3.7e-67 258.8 224 65.2
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 4.8e-67 258.5 236 61.4
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 4.8e-67 258.5 219 64.8
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.4e-66 256.9 220 63.6
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 1.4e-66 256.9 150 84.7
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 1.8e-66 256.5 219 64.4
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 2.4e-66 256.1 219 64.4
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 3.1e-66 255.8 219 62.1
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 4.0e-66 255.4 219 64.8
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 5.3e-66 255.0 150 83.3
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 6.9e-66 254.6 153 81.0
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 9.0e-66 254.2 227 62.1
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 9.0e-66 254.2 219 61.6
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 2.0e-65 253.1 231 61.5
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 2.0e-65 253.1 222 62.6
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 2.6e-65 252.7 219 63.0
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 1.0e-64 250.8 185 67.6
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 2.2e-64 249.6 200 65.5
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 2.2e-64 249.6 223 61.9
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 6.5e-64 248.1 219 60.7
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 6.5e-64 248.1 150 82.7
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 8.4e-64 247.7 219 60.7
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 2.5e-63 246.1 206 65.5
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 3.2e-63 245.7 206 63.6
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 4.2e-63 245.4 153 77.1
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 5.5e-63 245.0 164 71.3
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 7.1e-63 244.6 220 63.2
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 7.1e-63 244.6 219 60.7
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 9.3e-63 244.2 201 63.2
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 9.3e-63 244.2 201 63.2
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 3.5e-62 242.3 219 59.4
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 3.5e-62 242.3 224 60.7
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 4.6e-62 241.9 221 61.5
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 7.9e-62 241.1 152 75.7
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 7.9e-62 241.1 149 77.2
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 1.0e-61 240.7 227 56.8
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 3.0e-61 239.2 170 70.0
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.9e-60 236.5 136 83.1
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 1.3e-59 233.8 149 76.5
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 2.8e-59 232.6 152 73.7
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 1.4e-58 230.3 149 73.8
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 1.2e-57 227.3 149 75.2
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.5e-57 226.9 166 70.5
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 5.9e-57 224.9 151 74.8
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 1.3e-56 223.8 219 56.6
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 6.5e-56 221.5 194 62.9
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.4e-55 220.3 220 56.8
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 1.4e-55 220.3 157 69.4
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 4.2e-55 218.8 155 69.7
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 4.2e-55 218.8 222 57.7
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 7.2e-55 218.0 130 80.0
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 1.2e-54 217.2 151 68.9
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 3.6e-54 215.7 221 59.3
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 1.3e-53 213.8 188 60.1
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 1.8e-53 213.4 221 55.2
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 1.8e-53 213.4 200 60.0
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 2.3e-53 213.0 153 68.0
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 2.5e-52 209.5 128 76.6
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 4.3e-52 208.8 221 53.8
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 1.3e-51 207.2 231 51.9
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 2.8e-51 206.1 167 63.5
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 2.8e-51 206.1 167 63.5
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 1.8e-50 203.4 225 53.3
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 2.0e-49 199.9 153 60.1
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 2.6e-49 199.5 166 62.0
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 4.5e-49 198.7 150 62.0
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 3.8e-48 195.7 152 59.2
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 5.1e-45 185.3 150 58.7
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 8.8e-45 184.5 109 80.7
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 8.2e-43 177.9 108 77.8
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 3.8e-40 169.1 178 57.9
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 5.0e-40 168.7 110 76.4
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 1.1e-36 157.5 154 62.3
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.7e-35 152.5 154 55.8
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 1.2e-33 147.5 154 56.5
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 4.5e-33 145.6 160 53.1
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 1.7e-32 143.7 104 66.3
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 5.0e-32 142.1 163 52.8
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 4.0e-29 132.5 72 84.7
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 1.8e-26 123.6 155 44.5
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 1.0e-21 107.8 68 73.5
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 1.0e-21 107.8 68 73.5
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 2.2e-16 90.1 109 50.5
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 1.9e-15 87.0 58 70.7
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 6.8e-13 78.6 52 71.2
Zm00001eb331770 Zea mays HOM05D006610 ORTHO05D008447 2.1e-06 57.0 110 38.2


User provided reference genes

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