Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014041 Daucus carota HOM05D000212 ORTHO05D002824 1.5e-16 88.2 38 100.0
Dinv08567 Davidia involucrata HOM05D000212 ORTHO05D002824 7.6e-13 75.9 38 86.8
COL.COLO4_22469 Corchorus olitorius HOM05D000212 ORTHO05D002824 1.3e-12 75.1 38 81.6
VMungo0251G1356 Vigna mungo HOM05D000212 ORTHO05D002824 2.9e-12 73.9 38 84.2
QL06p051280 Quercus lobata HOM05D000212 ORTHO05D002824 3.8e-12 73.6 37 81.1
HanXRQChr15g0492971 Helianthus annuus HOM05D000212 ORTHO05D002824 8.4e-12 72.4 38 84.2
Cfa007009 Carpinus fangiana HOM05D000212 ORTHO05D002824 1.1e-11 72.0 38 78.9
CANSAT01G2290 Cannabis sativa HOM05D000212 ORTHO05D002824 1.4e-11 71.6 38 81.6
CiPaw.07G061500 Carya illinoinensis HOM05D000212 ORTHO05D002824 1.4e-11 71.6 38 81.6
Aqoxy6G02139 Aquilegia oxysepala HOM05D000212 ORTHO05D002824 1.9e-11 71.2 38 81.6
Potri.005G110000 Populus trichocarpa HOM05D000212 ORTHO05D002824 2.5e-11 70.9 38 78.9
Atru.chr3.874 Acer truncatum HOM05D000212 ORTHO05D002824 3.2e-11 70.5 38 78.9
Lsat_1_v5_gn_3_72001 Lactuca sativa HOM05D000212 ORTHO05D002824 3.2e-11 70.5 36 83.3
Phvul.003G265800 Phaseolus vulgaris HOM05D000212 ORTHO05D002824 5.5e-11 69.7 38 78.9
Lsat_1_v5_gn_4_106460 Lactuca sativa HOM05D000212 ORTHO05D002824 7.1e-11 69.3 38 81.6
Ca_24925_v3 Cicer arietinum L. HOM05D000212 ORTHO05D002824 9.3e-11 68.9 38 78.9
PGR119G0517 Punica granatum HOM05D000212 ORTHO05D002824 9.3e-11 68.9 36 77.8
CiPaw.08G128200 Carya illinoinensis HOM05D000212 ORTHO05D002824 1.6e-10 68.2 38 78.9
CiPaw.08G128700 Carya illinoinensis HOM05D000212 ORTHO05D002824 1.6e-10 68.2 38 78.9
Gohir.A02G172800 Gossypium hirsutum HOM05D000212 ORTHO05D002824 2.7e-10 67.4 38 78.9
Gohir.D03G007100 Gossypium hirsutum HOM05D000212 ORTHO05D002824 2.7e-10 67.4 38 78.9
Gorai.003G007400 Gossypium raimondii HOM05D000212 ORTHO05D002824 2.7e-10 67.4 38 78.9
ECA246G0373 Erigeron canadensis HOM05D000212 ORTHO05D002824 3.5e-10 67.0 38 78.9
HanXRQChr16g0531771 Helianthus annuus HOM05D000212 ORTHO05D002824 4.6e-10 66.6 38 78.9
HPP92_022189 Vanilla planifolia HOM05D000212 ORTHO05D002824 4.6e-10 66.6 36 77.8
FAN19G2156 Fragaria x ananassa HOM05D000212 ORTHO05D002824 7.9e-10 65.9 39 74.4
Oeu048469.1 Olea europaea HOM05D000212 ORTHO05D002824 7.9e-10 65.9 38 71.1
CDE05G2536 Ceratophyllum demersum HOM05D000212 ORTHO05D002824 1.8e-09 64.7 38 73.7
Sed0027405 Sechium edule HOM05D000212 ORTHO05D002824 1.8e-09 64.7 38 76.3
Manes.02G108200 Manihot esculenta HOM05D000212 ORTHO05D002824 2.3e-09 64.3 38 73.7
PSO541G5499 Papaver somniferum HOM05D000212 ORTHO05D002824 3.0e-09 63.9 38 78.9
GSVIVG01006329001 Vitis vinifera HOM05D000212 ORTHO05D002824 3.9e-09 63.5 38 73.7
Cc07_g11130 Coffea canephora HOM05D000212 ORTHO05D002824 6.7e-09 62.8 38 76.3
AUR62018021 Chenopodium quinoa HOM05D000212 ORTHO05D002824 8.7e-09 62.4 38 76.3
Cpa.g.sc6.294 Carica papaya HOM05D000212 ORTHO05D002824 1.1e-08 62.0 38 71.1
Ciclev10025703m.g Citrus clementina HOM05D000212 ORTHO05D002824 1.1e-08 62.0 38 76.3
CSS0040516 Camellia sinensis var. sinensis HOM05D000212 ORTHO05D002824 1.5e-08 61.6 38 73.7
PSO675G5639 Papaver somniferum HOM05D000212 ORTHO05D002824 1.5e-08 61.6 38 73.7
Duzib147G1303 Durio zibethinus HOM05D000212 ORTHO05D002824 1.9e-08 61.2 38 73.7
Ah.02g123270 Amaranthus hybridus HOM05D000212 ORTHO05D002824 2.5e-08 60.8 36 72.2
CSS0018967 Camellia sinensis var. sinensis HOM05D000212 ORTHO05D002824 2.5e-08 60.8 38 71.1
MELO3C013751.2 Cucumis melo HOM05D000212 ORTHO05D002824 2.5e-08 60.8 38 73.7
Dinv40124 Davidia involucrata HOM05D000212 ORTHO05D002824 2.5e-08 60.8 38 73.7
Lalb_Chr16g0391431 Lupinus albus HOM05D000212 ORTHO05D002824 2.5e-08 60.8 38 71.1
THA.LOC104804275 Tarenaya hassleriana HOM05D000212 ORTHO05D002824 2.5e-08 60.8 36 69.4
Duzib187G1649 Durio zibethinus HOM05D000212 ORTHO05D002824 3.3e-08 60.5 38 71.1
CAN.G890.2 Capsicum annuum HOM05D000212 ORTHO05D002824 4.3e-08 60.1 38 71.1
SGA_v2.0_scaffold2G00973 Striga asiatica HOM05D000212 ORTHO05D002824 4.3e-08 60.1 36 66.7
Thecc.01G013800 Theobroma cacao HOM05D000212 ORTHO05D002824 4.3e-08 60.1 38 68.4
CsaV3_3G000630 Cucumis sativus L. HOM05D000212 ORTHO05D002824 5.7e-08 59.7 38 71.1
Solyc02g083540.3 Solanum lycopersicum HOM05D000212 ORTHO05D002824 5.7e-08 59.7 38 71.1
Sopen02g028320 Solanum pennellii HOM05D000212 ORTHO05D002824 5.7e-08 59.7 38 71.1
Atru.chr12.73 Acer truncatum HOM05D000212 ORTHO05D002824 7.4e-08 59.3 36 66.7
Nn5g30797 Nelumbo nucifera HOM05D000212 ORTHO05D002824 7.4e-08 59.3 38 68.4
THA.LOC104807505 Tarenaya hassleriana HOM05D000212 ORTHO05D002824 7.4e-08 59.3 36 66.7
VMungo1215G2759 Vigna mungo HOM05D000212 ORTHO05D002824 7.4e-08 59.3 33 81.8
Manes.01G149200 Manihot esculenta HOM05D000212 ORTHO05D002824 9.6e-08 58.9 38 71.1
Phvul.002G106200 Phaseolus vulgaris HOM05D000212 ORTHO05D002824 9.6e-08 58.9 33 81.8
Ciclev10031760m.g Citrus clementina HOM05D000212 ORTHO05D002824 1.3e-07 58.5 36 63.9
Dinv21771 Davidia involucrata HOM05D000212 ORTHO05D002824 1.3e-07 58.5 36 63.9
Gohir.A11G173100 Gossypium hirsutum HOM05D000212 ORTHO05D002824 1.3e-07 58.5 38 71.1
Gohir.D11G180100 Gossypium hirsutum HOM05D000212 ORTHO05D002824 1.3e-07 58.5 38 71.1
Gorai.007G192000 Gossypium raimondii HOM05D000212 ORTHO05D002824 1.3e-07 58.5 38 71.1
ECA232G0315 Erigeron canadensis HOM05D000212 ORTHO05D002824 1.6e-07 58.2 37 73.0
Potri.010G184700 Populus trichocarpa HOM05D000212 ORTHO05D002824 1.6e-07 58.2 35 65.7
HanXRQChr14g0441751 Helianthus annuus HOM05D000212 ORTHO05D002824 2.1e-07 57.8 36 72.2
BcaNung04886 Brassica carinata HOM05D000212 ORTHO05D002824 2.8e-07 57.4 36 69.4
QL08p063669 Quercus lobata HOM05D000212 ORTHO05D002824 2.8e-07 57.4 36 63.9
FAN28G2594 Fragaria x ananassa HOM05D000212 ORTHO05D002824 3.7e-07 57.0 39 71.8
Glyma.11G079500 Glycine max HOM05D000212 ORTHO05D002824 3.7e-07 57.0 33 78.8
MBI08_g37820_MAGBIO Magnolia biondii HOM05D000212 ORTHO05D002824 3.7e-07 57.0 35 77.1
RcHm_v2.0_Chr2g0098791 Rosa chinensis HOM05D000212 ORTHO05D002824 3.7e-07 57.0 39 71.8
Peaxi162Scf00635g00918 Petunia axillaris HOM05D000212 ORTHO05D002824 4.8e-07 56.6 33 78.8
SEGI_38736 Sequoiadendron giganteum HOM05D000212 ORTHO05D002824 4.8e-07 56.6 37 67.6
TPR.G10549 Trifolium pratense HOM05D000212 ORTHO05D002824 4.8e-07 56.6 38 71.1
Lalb_Chr05g0212231 Lupinus albus HOM05D000212 ORTHO05D002824 6.2e-07 56.2 38 71.1
Medtr5g022670 Medicago truncatula HOM05D000212 ORTHO05D002824 6.2e-07 56.2 38 68.4
Medtr8g075150 Medicago truncatula HOM05D000212 ORTHO05D002824 6.2e-07 56.2 39 66.7
COL.COLO4_25782 Corchorus olitorius HOM05D000212 ORTHO05D002824 8.2e-07 55.8 36 63.9
FvH4_1g11310 Fragaria vesca HOM05D000212 ORTHO05D002824 8.2e-07 55.8 39 69.2
Hund01685 Selenicereus undatus HOM05D000212 ORTHO05D002824 8.2e-07 55.8 38 60.5
TAR625G0660 Trochodendron aralioides HOM05D000212 ORTHO05D002824 8.2e-07 55.8 38 71.1
CiPaw.02G195300 Carya illinoinensis HOM05D000212 ORTHO05D002824 1.1e-06 55.5 36 61.1
TWI73G0570 Tripterygium wilfordii HOM05D000212 ORTHO05D002824 1.1e-06 55.5 38 68.4
Solyc03g095820.4 Solanum lycopersicum HOM05D000212 ORTHO05D002824 1.4e-06 55.1 36 58.3
TWI09G1530 Tripterygium wilfordii HOM05D000212 ORTHO05D002824 1.4e-06 55.1 37 70.3
CSS0027153 Camellia sinensis var. sinensis HOM05D000212 ORTHO05D002824 1.8e-06 54.7 38 68.4
Glyma.16G123800 Glycine max HOM05D000212 ORTHO05D002824 1.8e-06 54.7 32 78.1
AT4G35920 Arabidopsis thaliana HOM05D000212 ORTHO05D002824 3.1e-06 53.9 36 66.7
Prupe.7G172600 Prunus persica HOM05D000212 ORTHO05D002824 3.1e-06 53.9 39 69.2
Sc16g0001940 Simmondsia chinensis HOM05D000212 ORTHO05D002824 3.1e-06 53.9 33 75.8
arahy.Tifrunner.gnm1.ann1.30ZN3V Arachis hypogaea HOM05D000212 ORTHO05D002824 4.0e-06 53.5 38 68.4
Glyma.02G263300 Glycine max HOM05D000212 ORTHO05D002824 4.0e-06 53.5 38 60.5
arahy.Tifrunner.gnm1.ann1.85H9WH Arachis hypogaea HOM05D000212 ORTHO05D002824 5.3e-06 53.1 39 69.2
MD02G1127400 Malus domestica HOM05D000212 ORTHO05D002824 5.3e-06 53.1 39 66.7
Nitab4.5_0009630g0010 Nicotiana tabacum HOM05D000212 ORTHO05D002824 5.3e-06 53.1 33 75.8
MBI03_g17857_MAGBIO Magnolia biondii HOM05D000212 ORTHO05D002824 9.0e-06 52.4 35 60.0
Nitab4.5_0001789g0130 Nicotiana tabacum HOM05D000212 ORTHO05D002824 9.0e-06 52.4 33 72.7
PGSC0003DMG401020596 Solanum tuberosum HOM05D000212 ORTHO05D002824 9.0e-06 52.4 36 52.8
TPR.G19478 Trifolium pratense HOM05D000212 ORTHO05D002824 9.0e-06 52.4 37 64.9


User provided reference genes

Program Settings