Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014000 Daucus carota HOM05D007591 ORTHO05D009564 1.7e-123 446.0 234 100.0
Nitab4.5_0004612g0010 Nicotiana tabacum HOM05D007591 ORTHO05D009564 1.1e-29 134.4 119 63.9
Peaxi162Scf00171g00034 Petunia axillaris HOM05D007591 ORTHO05D009564 2.5e-29 133.3 128 59.4
Nitab4.5_0001180g0270 Nicotiana tabacum HOM05D007591 ORTHO05D009564 9.4e-29 131.3 126 58.7
Aqoxy3G04178 Aquilegia oxysepala HOM05D007591 ORTHO05D009564 4.7e-28 129.0 122 63.1
CAN.G1909.5 Capsicum annuum HOM05D007591 ORTHO05D009564 1.0e-27 127.9 125 59.2
HanXRQChr17g0560331 Helianthus annuus HOM05D007591 ORTHO05D009564 1.0e-27 127.9 126 59.5
Duzib091G0002 Durio zibethinus HOM05D007591 ORTHO05D009564 1.8e-27 127.1 122 62.3
Gohir.D02G024000 Gossypium hirsutum HOM05D007591 ORTHO05D009564 1.8e-27 127.1 119 60.5
Gorai.005G030000 Gossypium raimondii HOM05D007591 ORTHO05D009564 1.8e-27 127.1 119 60.5
FvH4_5g18200 Fragaria vesca HOM05D007591 ORTHO05D009564 2.3e-27 126.7 130 58.5
Migut.O00251 Erythranthe guttata HOM05D007591 ORTHO05D009564 4.0e-27 125.9 119 63.9
FAN04G1638 Fragaria x ananassa HOM05D007591 ORTHO05D009564 4.0e-27 125.9 119 67.2
FAN13G0294 Fragaria x ananassa HOM05D007591 ORTHO05D009564 4.0e-27 125.9 128 57.8
Gohir.A02G020402 Gossypium hirsutum HOM05D007591 ORTHO05D009564 4.0e-27 125.9 122 61.5
Sc10g0009060 Simmondsia chinensis HOM05D007591 ORTHO05D009564 5.2e-27 125.6 116 65.5
MSTRG.23207 Avicennia marina HOM05D007591 ORTHO05D009564 6.7e-27 125.2 119 59.7
QL07p035218 Quercus lobata HOM05D007591 ORTHO05D009564 8.8e-27 124.8 124 61.3
Prupe.5G241900 Prunus persica HOM05D007591 ORTHO05D009564 1.2e-26 124.4 126 58.7
TAR622G1019 Trochodendron aralioides HOM05D007591 ORTHO05D009564 1.2e-26 124.4 122 66.4
Psat0s3092g0040 Pisum sativum HOM05D007591 ORTHO05D009564 2.0e-26 123.6 128 58.6
Aa31LG6G9200 Aethionema arabicum HOM05D007591 ORTHO05D009564 2.6e-26 123.2 121 57.0
PGR083G0752 Punica granatum HOM05D007591 ORTHO05D009564 2.6e-26 123.2 122 60.7
Sabra04G0046100 Salix brachista HOM05D007591 ORTHO05D009564 2.6e-26 123.2 149 51.0
FAN18G3921 Fragaria x ananassa HOM05D007591 ORTHO05D009564 4.4e-26 122.5 130 56.2
Oeu001600.1 Olea europaea HOM05D007591 ORTHO05D009564 5.7e-26 122.1 119 58.8
Potri.004G068400 Populus trichocarpa HOM05D007591 ORTHO05D009564 7.5e-26 121.7 119 58.8
Sopen03g029150 Solanum pennellii HOM05D007591 ORTHO05D009564 7.5e-26 121.7 125 57.6
Thecc.04G198100 Theobroma cacao HOM05D007591 ORTHO05D009564 7.5e-26 121.7 121 65.3
CSS0020209 Camellia sinensis var. sinensis HOM05D007591 ORTHO05D009564 9.7e-26 121.3 129 55.8
Solyc03g098410.1 Solanum lycopersicum HOM05D007591 ORTHO05D009564 9.7e-26 121.3 119 60.5
CARHR134910 Cardamine hirsuta HOM05D007591 ORTHO05D009564 1.3e-25 120.9 119 62.2
RcHm_v2.0_Chr7g0177391 Rosa chinensis HOM05D007591 ORTHO05D009564 1.3e-25 120.9 134 55.2
TWI15G0768 Tripterygium wilfordii HOM05D007591 ORTHO05D009564 1.3e-25 120.9 119 61.3
PGSC0003DMG400010159 Solanum tuberosum HOM05D007591 ORTHO05D009564 1.7e-25 120.6 125 56.8
EL10Ac8g19512 Beta vulgaris HOM05D007591 ORTHO05D009564 2.2e-25 120.2 117 64.1
Haze_18422 Corylus avellana HOM05D007591 ORTHO05D009564 2.2e-25 120.2 129 55.8
Carub.0001s3401 Capsella rubella HOM05D007591 ORTHO05D009564 3.7e-25 119.4 119 58.0
Ca_25920_v3 Cicer arietinum L. HOM05D007591 ORTHO05D009564 3.7e-25 119.4 123 59.3
Eucgr.H00568 Eucalyptus grandis HOM05D007591 ORTHO05D009564 3.7e-25 119.4 135 55.6
Nn3g18513 Nelumbo nucifera HOM05D007591 ORTHO05D009564 3.7e-25 119.4 119 63.9
SalBow5G5001 Salvia bowleyana HOM05D007591 ORTHO05D009564 3.7e-25 119.4 119 62.2
Cc04_g08740 Coffea canephora HOM05D007591 ORTHO05D009564 6.3e-25 118.6 121 63.6
Actinidia35144 Actinidia chinensis HOM05D007591 ORTHO05D009564 8.2e-25 118.2 127 54.3
CiPaw.16G070000 Carya illinoinensis HOM05D007591 ORTHO05D009564 8.2e-25 118.2 128 60.9
SpUn0008_0030 Schrenkiella parvula HOM05D007591 ORTHO05D009564 1.4e-24 117.5 119 63.9
Cpa.g.sc36.38 Carica papaya HOM05D007591 ORTHO05D009564 2.4e-24 116.7 119 59.7
COL.COLO4_20200 Corchorus olitorius HOM05D007591 ORTHO05D009564 2.4e-24 116.7 119 60.5
Thhalv10011878m.g Eutrema salsugineum HOM05D007591 ORTHO05D009564 2.4e-24 116.7 120 62.5
Medtr6g036570 Medicago truncatula HOM05D007591 ORTHO05D009564 2.4e-24 116.7 119 61.3
Sed0023620 Sechium edule HOM05D007591 ORTHO05D009564 2.4e-24 116.7 122 59.8
THA.LOC104817210 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 4.1e-24 115.9 126 60.3
CsaV3_1G005150 Cucumis sativus L. HOM05D007591 ORTHO05D009564 5.3e-24 115.5 124 58.1
Hma1.2p1_1404F.1_g281340 Hydrangea macrophylla HOM05D007591 ORTHO05D009564 7.0e-24 115.2 126 57.9
Dinv01404 Davidia involucrata HOM05D007591 ORTHO05D009564 9.1e-24 114.8 126 55.6
HPP92_005097 Vanilla planifolia HOM05D007591 ORTHO05D009564 9.1e-24 114.8 124 60.5
AL4G17330 Arabidopsis lyrata HOM05D007591 ORTHO05D009564 2.0e-23 113.6 123 58.5
AT2G25720 Arabidopsis thaliana HOM05D007591 ORTHO05D009564 2.7e-23 113.2 119 60.5
ClCG04G012550 Citrullus lanatus HOM05D007591 ORTHO05D009564 5.9e-23 112.1 119 58.8
MELO3C001953.2 Cucumis melo HOM05D007591 ORTHO05D009564 5.9e-23 112.1 124 57.3
Ah.09g232230 Amaranthus hybridus HOM05D007591 ORTHO05D009564 7.7e-23 111.7 121 61.2
Atru.chr9.1591 Acer truncatum HOM05D007591 ORTHO05D009564 1.0e-22 111.3 128 57.0
arahy.Tifrunner.gnm1.ann1.T0CPW9 Arachis hypogaea HOM05D007591 ORTHO05D009564 1.7e-22 110.5 127 50.4
MD14G1244400 Malus domestica HOM05D007591 ORTHO05D009564 1.7e-22 110.5 125 54.4
A04p11310 Brassica napus HOM05D007591 ORTHO05D009564 2.2e-22 110.2 126 59.5
BraA04t16792Z Brassica rapa HOM05D007591 ORTHO05D009564 2.2e-22 110.2 126 59.5
MBI06_g28831_MAGBIO Magnolia biondii HOM05D007591 ORTHO05D009564 2.9e-22 109.8 124 54.0
Lalb_Chr05g0221361 Lupinus albus HOM05D007591 ORTHO05D009564 5.0e-22 109.0 124 57.3
ECA234G2981 Erigeron canadensis HOM05D007591 ORTHO05D009564 6.5e-22 108.6 126 57.1
PSO063G6315 Papaver somniferum HOM05D007591 ORTHO05D009564 1.5e-21 107.5 130 54.6
BcaB06g27212 Brassica carinata HOM05D007591 ORTHO05D009564 1.9e-21 107.1 120 58.3
Glyma.08G057500 Glycine max HOM05D007591 ORTHO05D009564 2.5e-21 106.7 136 55.1
unitig_22.g5435 Utricularia gibba HOM05D007591 ORTHO05D009564 3.2e-21 106.3 111 62.2
C04p45070 Brassica napus HOM05D007591 ORTHO05D009564 5.5e-21 105.5 120 60.0
BolC4t26085H Brassica oleracea HOM05D007591 ORTHO05D009564 5.5e-21 105.5 120 60.0
Lsat_1_v5_gn_4_52441 Lactuca sativa HOM05D007591 ORTHO05D009564 7.2e-21 105.1 130 53.8
Phvul.002G333300 Phaseolus vulgaris HOM05D007591 ORTHO05D009564 7.2e-21 105.1 131 53.4
Rhsim12G0136500 Rhododendron simsii HOM05D007591 ORTHO05D009564 1.2e-20 104.4 157 47.1
Manes.02G219300 Manihot esculenta HOM05D007591 ORTHO05D009564 1.6e-20 104.0 119 52.9
SHI12607 Sapria himalayana HOM05D007591 ORTHO05D009564 4.7e-20 102.4 121 47.9
arahy.Tifrunner.gnm1.ann1.B1XHC0 Arachis hypogaea HOM05D007591 ORTHO05D009564 1.4e-19 100.9 121 56.2
ATR0807G077 Amborella trichopoda HOM05D007591 ORTHO05D009564 3.0e-19 99.8 125 54.4
Ciclev10022902m.g Citrus clementina HOM05D007591 ORTHO05D009564 3.0e-19 99.8 121 53.7
Zm00001eb429080 Zea mays HOM05D007591 ORTHO05D009564 5.2e-19 99.0 127 51.2
AUR62033202 Chenopodium quinoa HOM05D007591 ORTHO05D009564 1.5e-18 97.4 58 82.8
LjContig00484g0016765 Lotus japonicus HOM05D007591 ORTHO05D009564 2.0e-18 97.1 127 51.2
AUR62008565 Chenopodium quinoa HOM05D007591 ORTHO05D009564 3.4e-18 96.3 58 81.0
CDE07G1474 Ceratophyllum demersum HOM05D007591 ORTHO05D009564 2.8e-17 93.2 103 58.3
SpUn0123_0020 Schrenkiella parvula HOM05D007591 ORTHO05D009564 2.3e-14 83.6 54 77.8
CAN.G1909.8 Capsicum annuum HOM05D007591 ORTHO05D009564 3.2e-13 79.7 78 60.3
THA.LOC104813140 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 7.2e-13 78.6 111 47.7
SEGI_35599 Sequoiadendron giganteum HOM05D007591 ORTHO05D009564 1.6e-12 77.4 120 44.2
Pp3c23_22030 Physcomitrium patens HOM05D007591 ORTHO05D009564 1.8e-11 73.9 121 47.1
Medtr6g036573 Medicago truncatula HOM05D007591 ORTHO05D009564 5.2e-11 72.4 49 75.5
Atru.chr5.956 Acer truncatum HOM05D007591 ORTHO05D009564 6.8e-11 72.0 69 59.4
Mapoly0020s0124 Marchantia polymorpha HOM05D007591 ORTHO05D009564 5.7e-10 68.9 136 38.2
Os04g0566000 Oryza sativa ssp. japonica HOM05D007591 ORTHO05D009564 3.7e-09 66.2 47 70.2


User provided reference genes

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