Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013956 Daucus carota HOM05D007410 ORTHO05D009500 5.1e-114 416.4 811 100.0
Cfa016527 Carpinus fangiana HOM05D007410 ORTHO05D009500 2.2e-32 145.2 184 41.8
DCAR_020784 Daucus carota HOM05D007410 ORTHO05D009500 8.3e-32 143.3 188 42.0
RcHm_v2.0_Chr3g0471971 Rosa chinensis HOM05D007410 ORTHO05D009500 9.2e-31 139.8 192 41.7
FAN02G1401 Fragaria x ananassa HOM05D007410 ORTHO05D009500 4.6e-30 137.5 175 44.0
FAN14G2442 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.7e-29 135.6 173 43.9
FvH4_6g17750 Fragaria vesca HOM05D007410 ORTHO05D009500 2.3e-29 135.2 174 43.7
HanXRQChr17g0534281 Helianthus annuus HOM05D007410 ORTHO05D009500 2.9e-29 134.8 191 44.0
Haze_19526 Corylus avellana HOM05D007410 ORTHO05D009500 3.9e-29 134.4 174 42.5
Dinv34010 Davidia involucrata HOM05D007410 ORTHO05D009500 3.9e-29 134.4 167 43.7
Prupe.7G119000 Prunus persica HOM05D007410 ORTHO05D009500 1.2e-27 129.4 168 42.9
TWI60G0552 Tripterygium wilfordii HOM05D007410 ORTHO05D009500 2.1e-27 128.6 173 41.6
FAN05G1927 Fragaria x ananassa HOM05D007410 ORTHO05D009500 3.6e-27 127.9 175 42.9
HanXRQChr17g0535541 Helianthus annuus HOM05D007410 ORTHO05D009500 4.7e-27 127.5 149 46.3
MD12G1016300 Malus domestica HOM05D007410 ORTHO05D009500 6.2e-27 127.1 168 41.7
Oeu023854.1 Olea europaea HOM05D007410 ORTHO05D009500 6.2e-27 127.1 190 44.2
MD14G1014400 Malus domestica HOM05D007410 ORTHO05D009500 1.4e-26 125.9 157 40.8
Nitab4.5_0001290g0100 Nicotiana tabacum HOM05D007410 ORTHO05D009500 3.1e-26 124.8 171 45.6
Eucgr.A01557 Eucalyptus grandis HOM05D007410 ORTHO05D009500 4.0e-26 124.4 154 43.5
Nitab4.5_0026813g0010 Nicotiana tabacum HOM05D007410 ORTHO05D009500 8.9e-26 123.2 170 44.7
Nitab4.5_0005621g0120 Nicotiana tabacum HOM05D007410 ORTHO05D009500 9.8e-25 119.8 156 46.2
Peaxi162Scf00802g00013 Petunia axillaris HOM05D007410 ORTHO05D009500 1.1e-23 116.3 156 44.2
FAN09G1720 Fragaria x ananassa HOM05D007410 ORTHO05D009500 2.4e-23 115.2 151 40.4
Hma1.2p1_0084F.1_g043130 Hydrangea macrophylla HOM05D007410 ORTHO05D009500 2.0e-22 112.1 123 47.2
Oeu058028.1 Olea europaea HOM05D007410 ORTHO05D009500 4.6e-22 110.9 139 47.5
QL02p025248 Quercus lobata HOM05D007410 ORTHO05D009500 6.0e-22 110.5 163 37.4
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 7.8e-22 110.2 148 38.5
SGA_v2.0_scaffold75G24801 Striga asiatica HOM05D007410 ORTHO05D009500 8.6e-21 106.7 195 36.4
Sopen12g034470 Solanum pennellii HOM05D007410 ORTHO05D009500 2.5e-20 105.1 157 42.7
PGSC0003DMG400004719 Solanum tuberosum HOM05D007410 ORTHO05D009500 2.5e-20 105.1 154 42.2
Dinv39608 Davidia involucrata HOM05D007410 ORTHO05D009500 3.3e-20 104.8 170 61.2
TAR365G0607 Trochodendron aralioides HOM05D007410 ORTHO05D009500 3.3e-20 104.8 121 42.1
Cc06_g05130 Coffea canephora HOM05D007410 ORTHO05D009500 1.6e-19 102.4 161 42.9
Aa31LG3G15130 Aethionema arabicum HOM05D007410 ORTHO05D009500 2.8e-19 101.7 179 34.6
CSS0026121 Camellia sinensis var. sinensis HOM05D007410 ORTHO05D009500 1.8e-18 99.0 106 46.2
Solyc12g099840.1 Solanum lycopersicum HOM05D007410 ORTHO05D009500 3.1e-18 98.2 165 40.0
Rhsim03G0082200 Rhododendron simsii HOM05D007410 ORTHO05D009500 4.0e-18 97.8 176 38.6
ClCG05G007520 Citrullus lanatus HOM05D007410 ORTHO05D009500 5.2e-18 97.4 158 32.9
Duzib093G0520 Durio zibethinus HOM05D007410 ORTHO05D009500 8.9e-18 96.7 172 68.6
VMungo1383G0444 Vigna mungo HOM05D007410 ORTHO05D009500 2.0e-17 95.5 155 37.4
Atru.BG.129.p Acer truncatum HOM05D007410 ORTHO05D009500 2.6e-17 95.1 128 41.4
Migut.J00989 Erythranthe guttata HOM05D007410 ORTHO05D009500 3.4e-17 94.7 132 43.2
MELO3C006839.2 Cucumis melo HOM05D007410 ORTHO05D009500 5.8e-17 94.0 178 31.5
Phvul.001G185900 Phaseolus vulgaris HOM05D007410 ORTHO05D009500 5.8e-17 94.0 153 37.3
Sp6g31520 Schrenkiella parvula HOM05D007410 ORTHO05D009500 9.8e-17 93.2 166 36.1
Carub.0006s1061 Capsella rubella HOM05D007410 ORTHO05D009500 1.3e-16 92.8 170 32.9
PGR004G1775 Punica granatum HOM05D007410 ORTHO05D009500 1.3e-16 92.8 126 39.7
CAN.G575.91 Capsicum annuum HOM05D007410 ORTHO05D009500 2.9e-16 91.7 158 38.6
Sed0018174 Sechium edule HOM05D007410 ORTHO05D009500 2.9e-16 91.7 150 33.3
Sc18g0006010 Simmondsia chinensis HOM05D007410 ORTHO05D009500 2.9e-16 91.7 151 33.1
CsaV3_3G016400 Cucumis sativus L. HOM05D007410 ORTHO05D009500 3.7e-16 91.3 179 31.8
Atru.chr12.1036 Acer truncatum HOM05D007410 ORTHO05D009500 1.4e-15 89.4 94 44.7
Lj9E304T4 Lonicera japonica HOM05D007410 ORTHO05D009500 1.9e-15 89.0 115 40.9
Potri.010G249800 Populus trichocarpa HOM05D007410 ORTHO05D009500 5.4e-15 87.4 146 37.7
AT5G12100 Arabidopsis thaliana HOM05D007410 ORTHO05D009500 7.1e-15 87.0 186 33.3
SGA_v2.0_scaffold40G15416 Striga asiatica HOM05D007410 ORTHO05D009500 7.1e-15 87.0 130 39.2
EL10Ac1g00861 Beta vulgaris HOM05D007410 ORTHO05D009500 9.2e-15 86.7 132 33.3
AUR62004183 Chenopodium quinoa HOM05D007410 ORTHO05D009500 1.6e-14 85.9 144 32.6
CiPaw.09G007900 Carya illinoinensis HOM05D007410 ORTHO05D009500 4.6e-14 84.3 116 39.7
Manes.09G058000 Manihot esculenta HOM05D007410 ORTHO05D009500 4.6e-14 84.3 173 63.6
Nn8g39918 Nelumbo nucifera HOM05D007410 ORTHO05D009500 4.6e-14 84.3 129 37.2
BolC9t59308H Brassica oleracea HOM05D007410 ORTHO05D009500 6.0e-14 84.0 204 30.9
AUR62013683 Chenopodium quinoa HOM05D007410 ORTHO05D009500 6.0e-14 84.0 171 66.7
Sabra10G0194300 Salix brachista HOM05D001909 ORTHO05D007079 6.0e-14 84.0 170 64.1
FAN09G0790 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.3e-13 82.8 171 63.2
BcaNung06328 Brassica carinata HOM05D007410 ORTHO05D009500 2.3e-13 82.0 201 31.3
COL.COLO4_29826 Corchorus olitorius HOM05D007410 ORTHO05D009500 2.3e-13 82.0 62 58.1
Gohir.A01G210000 Gossypium hirsutum HOM05D007410 ORTHO05D009500 3.9e-13 81.3 170 62.9
Glyma.03G190300 Glycine max HOM05D007410 ORTHO05D009500 1.1e-12 79.7 136 35.3
Lj1g0017625 Lotus japonicus HOM05D007410 ORTHO05D009500 1.1e-12 79.7 119 39.5
SHI27720 Sapria himalayana HOM05D007410 ORTHO05D009500 1.6e-11 75.9 103 41.7
C09p64770 Brassica napus HOM05D007410 ORTHO05D009500 3.6e-11 74.7 204 30.4
CARHR201020 Cardamine hirsuta HOM05D007410 ORTHO05D009500 3.6e-11 74.7 153 31.4
Psat2g007640 Pisum sativum HOM05D007410 ORTHO05D009500 6.2e-11 73.9 151 33.8
A10p25700 Brassica napus HOM05D007410 ORTHO05D009500 1.4e-10 72.8 204 29.9
Atru.chr12.1030 Acer truncatum HOM05D007410 ORTHO05D009500 2.3e-10 72.0 95 42.1
BraA10t44635Z Brassica rapa HOM05D007410 ORTHO05D009500 3.1e-10 71.6 204 29.4
Glyma.19G190733 Glycine max HOM05D007410 ORTHO05D009500 3.1e-10 71.6 158 60.8
Lalb_Chr01g0018371 Lupinus albus HOM05D007410 ORTHO05D009500 3.1e-10 71.6 158 60.8
Ciclev10033972m.g Citrus clementina HOM05D007410 ORTHO05D009500 5.2e-10 70.9 110 38.2
CDE01G0670 Ceratophyllum demersum HOM05D003192 ORTHO05D003596 6.8e-10 70.5 183 30.1
Gorai.002G243300 Gossypium raimondii HOM05D007410 ORTHO05D009500 8.9e-10 70.1 137 33.6
Actinidia39878 Actinidia chinensis HOM05D007410 ORTHO05D009500 1.2e-09 69.7 59 52.5
CANSAT80G0494 Cannabis sativa HOM05D007410 ORTHO05D009500 1.5e-09 69.3 111 35.1
Gohir.D01G198900 Gossypium hirsutum HOM05D007410 ORTHO05D009500 2.0e-09 68.9 148 32.4
Glyma.19G190667 Glycine max HOM05D007410 ORTHO05D009500 2.6e-09 68.6 124 33.9
Cpa.g.sc117.70 Carica papaya HOM05D007410 ORTHO05D009500 2.2e-08 65.5 171 64.3
Migut.A01169 Erythranthe guttata HOM05D007410 ORTHO05D009500 2.2e-08 65.5 165 63.6
Medtr7g103600 Medicago truncatula HOM05D007410 ORTHO05D009500 2.2e-08 65.5 131 29.8
Ca_08961_v3 Cicer arietinum L. HOM05D007410 ORTHO05D009500 3.7e-08 64.7 154 61.7
ECA233G1087 Erigeron canadensis HOM05D001398 ORTHO05D001467 1.9e-07 62.4 54 53.7
Ah.05g174660 Amaranthus hybridus HOM05D007410 ORTHO05D009500 3.2e-07 61.6 61 44.3
Thhalv10015810m.g Eutrema salsugineum HOM05D007410 ORTHO05D009500 4.1e-07 61.2 95 34.7
HPP92_024556 Vanilla planifolia HOM05D005651 ORTHO05D006877 4.6e-06 57.8 159 28.9


User provided reference genes

Program Settings