Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 2.0e-231 805.4 424 100.0
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 4.4e-125 452.2 450 54.4
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 2.7e-114 416.4 447 51.2
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 1.0e-113 414.5 448 51.6
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.7e-113 413.7 436 50.7
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 5.0e-113 412.1 440 50.9
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 6.5e-113 411.8 445 50.1
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 8.5e-113 411.4 434 52.1
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 1.1e-112 411.0 424 54.0
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 1.5e-112 410.6 438 52.1
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 1.5e-112 410.6 438 50.5
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 1.9e-112 410.2 435 53.3
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 2.5e-112 409.8 438 53.2
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 1.2e-111 407.5 451 51.0
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 2.1e-111 406.8 446 51.1
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 4.7e-111 405.6 438 49.8
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 6.1e-111 405.2 438 52.3
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 1.4e-110 404.1 437 51.0
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 1.4e-110 404.1 446 50.0
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 1.4e-110 404.1 447 50.8
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 4.0e-110 402.5 433 50.1
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 4.0e-110 402.5 430 50.5
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 6.8e-110 401.7 440 50.5
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 8.8e-110 401.4 448 50.7
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 8.8e-110 401.4 435 50.3
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 1.2e-109 401.0 444 50.9
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 4.4e-109 399.1 354 57.9
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 9.8e-109 397.9 454 48.2
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 1.3e-108 397.5 436 50.2
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 1.3e-108 397.5 443 51.0
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.3e-108 397.5 433 50.8
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 2.8e-108 396.4 435 49.0
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 2.8e-108 396.4 429 51.3
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 6.3e-108 395.2 445 50.3
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 8.3e-108 394.8 431 49.7
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 1.1e-107 394.4 412 54.1
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 1.8e-107 393.7 429 50.8
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 9.1e-107 391.3 442 48.9
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 4.5e-106 389.0 355 55.8
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 5.9e-106 388.7 434 49.8
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 5.9e-106 388.7 442 48.9
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 1.0e-105 387.9 460 47.8
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 1.3e-105 387.5 435 50.1
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 1.7e-105 387.1 440 51.1
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 2.9e-105 386.3 438 49.8
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 2.9e-105 386.3 436 49.8
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 2.9e-105 386.3 351 55.6
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 5.0e-105 385.6 452 47.8
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 6.6e-105 385.2 442 50.0
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 1.1e-104 384.4 438 49.8
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 1.9e-104 383.6 435 49.7
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 2.5e-104 383.3 430 49.8
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 3.3e-104 382.9 440 50.7
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 4.2e-104 382.5 439 48.7
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 1.2e-103 380.9 433 49.7
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 1.6e-103 380.6 448 48.9
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 1.6e-103 380.6 435 48.0
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 8.0e-103 378.3 353 55.5
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 1.0e-102 377.9 425 48.9
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 1.4e-102 377.5 466 46.1
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 2.3e-102 376.7 438 48.2
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 4.0e-102 375.9 430 50.2
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 4.0e-102 375.9 446 48.4
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 5.2e-102 375.6 459 46.6
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 5.2e-102 375.6 459 46.4
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 5.2e-102 375.6 430 49.5
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 5.2e-102 375.6 443 49.0
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 6.8e-102 375.2 435 49.2
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 6.8e-102 375.2 435 49.2
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 6.8e-102 375.2 435 49.2
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 6.8e-102 375.2 434 47.5
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 8.9e-102 374.8 440 48.6
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 1.2e-101 374.4 447 48.3
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 1.5e-101 374.0 435 49.4
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.5e-101 374.0 440 50.2
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 3.4e-101 372.9 444 48.9
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 4.4e-101 372.5 435 49.2
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 4.4e-101 372.5 435 49.4
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 5.7e-101 372.1 434 47.0
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 5.7e-101 372.1 469 46.3
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 1.7e-100 370.5 432 48.1
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.2e-100 370.2 451 47.0
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 2.8e-100 369.8 443 47.2
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 3.7e-100 369.4 423 47.5
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 3.7e-100 369.4 425 47.8
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 4.9e-100 369.0 426 49.3
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 6.3e-100 368.6 435 48.7
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 5.4e-99 365.5 440 48.4
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 7.0e-99 365.2 435 48.5
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 9.2e-99 364.8 426 46.2
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 1.2e-98 364.4 448 46.0
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 2.0e-98 363.6 422 48.1
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 4.5e-98 362.5 436 47.2
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 1.0e-97 361.3 442 45.9
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 2.3e-97 360.1 428 47.7
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 2.3e-97 360.1 428 47.7
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 2.3e-97 360.1 428 47.7
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 2.3e-97 360.1 436 46.8
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 2.9e-97 359.8 432 48.4
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 3.8e-97 359.4 389 52.2
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 8.6e-97 358.2 432 45.8
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 1.1e-96 357.8 417 47.2
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 4.3e-96 355.9 353 52.4
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 4.3e-96 355.9 428 47.2
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 4.3e-96 355.9 431 47.3
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 1.2e-95 354.4 428 46.5
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 2.1e-95 353.6 434 45.9
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 2.8e-95 353.2 419 48.7
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 6.1e-95 352.1 436 44.7
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 8.0e-95 351.7 435 44.8
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 1.0e-94 351.3 373 49.9
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 1.8e-94 350.5 459 43.8
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 3.1e-94 349.7 345 55.7
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 8.9e-94 348.2 440 45.2
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 3.4e-93 346.3 335 52.8
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 4.4e-93 345.9 413 48.7
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 1.7e-92 344.0 444 45.9
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 2.2e-92 343.6 431 46.6
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 2.9e-92 343.2 426 46.2
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 1.4e-91 340.9 439 46.0
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 1.4e-91 340.9 430 47.4
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 1.4e-91 340.9 335 52.8
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 1.9e-91 340.5 422 45.0
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 7.0e-91 338.6 356 49.7
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 7.0e-91 338.6 432 46.3
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 9.2e-91 338.2 430 44.7
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 9.2e-91 338.2 426 47.2
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 1.6e-90 337.4 432 45.1
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 2.3e-89 333.6 427 46.4
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 3.0e-89 333.2 416 47.8
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-88 331.3 438 45.9
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 6.2e-87 325.5 349 50.7
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 4.0e-86 322.8 294 57.5
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.3e-84 317.8 443 43.1
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 6.4e-84 315.5 359 48.2
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 3.5e-82 309.7 455 43.7
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 1.3e-81 307.8 457 41.1
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 6.6e-81 305.4 370 44.9
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 7.3e-80 302.0 370 44.3
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 1.8e-78 297.4 353 44.5
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 5.2e-78 295.8 385 42.1
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 8.9e-78 295.0 361 43.8
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 2.6e-77 293.5 349 44.1
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 2.2e-76 290.4 356 44.7
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.9e-75 287.3 224 63.8
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 1.3e-73 281.2 293 50.2
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 2.6e-69 266.9 361 41.6
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.8e-68 263.1 349 41.8
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.9e-64 250.8 312 44.9
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 9.6e-64 248.4 342 40.1
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 6.2e-63 245.7 362 37.3
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 9.0e-62 241.9 257 49.4
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 2.0e-61 240.7 363 38.8
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.1e-59 235.0 348 39.9
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 1.1e-59 235.0 255 48.2
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 2.5e-56 223.8 217 50.2
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.3e-56 223.4 350 35.1
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 2.1e-55 220.7 240 47.5
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 1.5e-53 214.5 154 73.4
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.4e-53 213.4 355 35.8
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.2e-52 210.7 347 36.6
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 2.2e-52 210.7 391 37.1
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 6.4e-52 209.1 353 36.3
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.1e-51 208.4 349 35.8
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.4e-51 208.0 348 34.8
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 2.7e-50 203.8 248 45.2
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 2.7e-50 203.8 250 43.2
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 1.6e-47 194.5 240 42.9
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 8.1e-47 192.2 354 33.9
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 1.9e-43 181.0 371 33.2
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 1.5e-40 171.4 243 38.3
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.5e-21 108.2 114 42.1
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 3.6e-18 97.1 106 49.1
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.8e-15 87.4 100 39.0
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 1.8e-14 84.7 284 25.4
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.4e-14 84.3 142 45.8
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.9e-12 77.4 87 46.0
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 6.1e-10 69.7 60 50.0
DCAR_029202 Daucus carota HOM05D000015 ORTHO05D175433 3.0e-09 67.4 35 94.3
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 9.7e-08 62.4 66 42.4
Nn1g01454 Nelumbo nucifera HOM05D003764 ORTHO05D004356 8.2e-07 59.3 37 73.0


User provided reference genes

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