Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013903 Daucus carota HOM05D006241 ORTHO05D007842 9.2e-46 186.4 87 100.0
ClCG05G015200 Citrullus lanatus HOM05D006241 ORTHO05D007842 4.9e-15 84.3 59 66.1
Medtr4g075160 Medicago truncatula HOM05D006241 ORTHO05D007842 1.4e-14 82.8 53 69.8
Sed0002381 Sechium edule HOM05D006241 ORTHO05D007842 9.2e-14 80.1 44 79.5
SalBow6G4847 Salvia bowleyana HOM05D006241 ORTHO05D007842 3.5e-13 78.2 76 56.6
AUR62015196 Chenopodium quinoa HOM05D006241 ORTHO05D007842 4.6e-13 77.8 53 66.0
Psat7g177480 Pisum sativum HOM05D006241 ORTHO05D007842 2.3e-12 75.5 53 67.9
Ah.01g013010 Amaranthus hybridus HOM05D006241 ORTHO05D007842 6.6e-12 73.9 47 68.1
Ca_19011_v3 Cicer arietinum L. HOM05D006241 ORTHO05D007842 8.7e-12 73.6 55 65.5
MD15G1003400 Malus domestica HOM05D006241 ORTHO05D007842 8.7e-12 73.6 64 56.2
MD08G1003800 Malus domestica HOM05D006241 ORTHO05D007842 1.1e-11 73.2 64 56.2
AL2G36270 Arabidopsis lyrata HOM05D006241 ORTHO05D007842 1.5e-11 72.8 53 67.9
AT1G76200 Arabidopsis thaliana HOM05D006241 ORTHO05D007842 1.5e-11 72.8 53 67.9
MELO3C017010.2 Cucumis melo HOM05D006241 ORTHO05D007842 1.5e-11 72.8 53 67.9
COL.COLO4_21601 Corchorus olitorius HOM05D006241 ORTHO05D007842 1.9e-11 72.4 53 66.0
FAN20G1861 Fragaria x ananassa HOM05D006241 ORTHO05D007842 1.9e-11 72.4 68 52.9
FvH4_2g37630 Fragaria vesca HOM05D006241 ORTHO05D007842 2.5e-11 72.0 51 66.7
Atru.chr13.161 Acer truncatum HOM05D006241 ORTHO05D007842 3.3e-11 71.6 53 67.9
CsaV3_4G037120 Cucumis sativus L. HOM05D006241 ORTHO05D007842 4.3e-11 71.2 53 66.0
Lsat_1_v5_gn_8_133721 Lactuca sativa HOM05D006241 ORTHO05D007842 4.3e-11 71.2 52 67.3
Nitab4.5_0000588g0230 Nicotiana tabacum HOM05D006241 ORTHO05D007842 5.6e-11 70.9 60 58.3
CARHR069760 Cardamine hirsuta HOM05D006241 ORTHO05D007842 7.3e-11 70.5 52 65.4
Prupe.1G355800 Prunus persica HOM05D006241 ORTHO05D007842 7.3e-11 70.5 51 66.7
TWI12G0416 Tripterygium wilfordii HOM05D006241 ORTHO05D007842 7.3e-11 70.5 53 66.0
TWI56G0163 Tripterygium wilfordii HOM05D006241 ORTHO05D007842 7.3e-11 70.5 53 67.9
Migut.N03197 Erythranthe guttata HOM05D006241 ORTHO05D007842 9.6e-11 70.1 50 68.0
FAN15G0812 Fragaria x ananassa HOM05D006241 ORTHO05D007842 9.6e-11 70.1 51 64.7
DCAR_016755 Daucus carota HOM05D006241 ORTHO05D007842 1.3e-10 69.7 37 86.5
RcHm_v2.0_Chr6g0304101 Rosa chinensis HOM05D006241 ORTHO05D007842 1.3e-10 69.7 34 85.3
HanXRQChr17g0555751 Helianthus annuus HOM05D006241 ORTHO05D007842 1.6e-10 69.3 79 49.4
QL02p013848 Quercus lobata HOM05D006241 ORTHO05D007842 1.6e-10 69.3 50 64.0
Cc10_g00830 Coffea canephora HOM05D006241 ORTHO05D007842 2.1e-10 68.9 53 62.3
PSO357G0248 Papaver somniferum HOM05D006241 ORTHO05D007842 2.1e-10 68.9 53 64.2
SGA_v2.0_scaffold25G11191 Striga asiatica HOM05D006241 ORTHO05D007842 2.1e-10 68.9 34 82.4
Aa31LG4G6300 Aethionema arabicum HOM05D006241 ORTHO05D007842 2.8e-10 68.6 52 65.4
CAN.G311.105 Capsicum annuum HOM05D006241 ORTHO05D007842 2.8e-10 68.6 52 65.4
Glyma.12G025500 Glycine max HOM05D006241 ORTHO05D007842 2.8e-10 68.6 35 80.0
Thecc.08G056300 Theobroma cacao HOM05D006241 ORTHO05D007842 2.8e-10 68.6 52 61.5
Lj3g0010530 Lotus japonicus HOM05D006241 ORTHO05D007842 3.6e-10 68.2 52 61.5
PSO170G5266 Papaver somniferum HOM05D006241 ORTHO05D007842 3.6e-10 68.2 53 64.2
VMungo1127G1075 Vigna mungo HOM05D006241 ORTHO05D007842 3.6e-10 68.2 33 84.8
arahy.Tifrunner.gnm1.ann1.1F1YZI Arachis hypogaea HOM05D006241 ORTHO05D007842 4.8e-10 67.8 34 82.4
arahy.Tifrunner.gnm1.ann1.1NSU2H Arachis hypogaea HOM05D006241 ORTHO05D007842 4.8e-10 67.8 34 82.4
arahy.Tifrunner.gnm1.ann1.4R2MNP Arachis hypogaea HOM05D006241 ORTHO05D007842 4.8e-10 67.8 34 82.4
arahy.Tifrunner.gnm1.ann1.L8CN1K Arachis hypogaea HOM05D006241 ORTHO05D007842 4.8e-10 67.8 34 82.4
Cpa.g.sc222.6 Carica papaya HOM05D006241 ORTHO05D007842 4.8e-10 67.8 53 60.4
CSS0008517 Camellia sinensis var. sinensis HOM05D006241 ORTHO05D007842 6.2e-10 67.4 54 61.1
Glyma.11G099500 Glycine max HOM05D006241 ORTHO05D007842 6.2e-10 67.4 34 79.4
PGSC0003DMG400009898 Solanum tuberosum HOM05D006241 ORTHO05D007842 8.1e-10 67.0 52 59.6
Duzib116G0823 Durio zibethinus HOM05D006241 ORTHO05D007842 1.1e-09 66.6 51 62.7
Thhalv10019410m.g Eutrema salsugineum HOM05D006241 ORTHO05D007842 1.1e-09 66.6 52 63.5
MBI19_g43741_MAGBIO Magnolia biondii HOM05D006241 ORTHO05D007842 1.1e-09 66.6 71 49.3
Actinidia17033 Actinidia chinensis HOM05D006241 ORTHO05D007842 1.4e-09 66.2 52 65.4
BcaB02g07055 Brassica carinata HOM05D006241 ORTHO05D007842 1.4e-09 66.2 52 63.5
HanXRQChr17g0554651 Helianthus annuus HOM05D006241 ORTHO05D007842 1.4e-09 66.2 52 63.5
PGR031G1817 Punica granatum HOM05D006241 ORTHO05D007842 1.4e-09 66.2 54 63.0
THA.LOC109116669 Tarenaya hassleriana HOM05D006241 ORTHO05D007842 1.4e-09 66.2 51 64.7
TAR376G1175 Trochodendron aralioides HOM05D006241 ORTHO05D007842 1.4e-09 66.2 51 62.7
Carub.0002s2310 Capsella rubella HOM05D006241 ORTHO05D007842 1.8e-09 65.9 48 64.6
Dinv39579 Davidia involucrata HOM05D006241 ORTHO05D007842 1.8e-09 65.9 54 61.1
Manes.05G136000 Manihot esculenta HOM05D006241 ORTHO05D007842 1.8e-09 65.9 50 64.0
Sp5g31350 Schrenkiella parvula HOM05D006241 ORTHO05D007842 1.8e-09 65.9 48 64.6
CiPaw.07G140100 Carya illinoinensis HOM05D006241 ORTHO05D007842 2.4e-09 65.5 51 60.8
AUR62017658 Chenopodium quinoa HOM05D006241 ORTHO05D007842 2.4e-09 65.5 36 75.0
Eucgr.F01733 Eucalyptus grandis HOM05D006241 ORTHO05D007842 2.4e-09 65.5 52 59.6
Gohir.D01G094000 Gossypium hirsutum HOM05D006241 ORTHO05D007842 2.4e-09 65.5 51 60.8
Gorai.002G119300 Gossypium raimondii HOM05D006241 ORTHO05D007842 2.4e-09 65.5 51 60.8
Lalb_Chr10g0094931 Lupinus albus HOM05D006241 ORTHO05D007842 2.4e-09 65.5 55 58.2
THA.LOC104811457 Tarenaya hassleriana HOM05D006241 ORTHO05D007842 2.4e-09 65.5 51 62.7
ATR0661G361 Amborella trichopoda HOM05D006241 ORTHO05D007842 3.1e-09 65.1 36 77.8
Aqoxy6G01804 Aquilegia oxysepala HOM05D006241 ORTHO05D007842 3.1e-09 65.1 51 64.7
Cfa014051 Carpinus fangiana HOM05D006241 ORTHO05D007842 3.1e-09 65.1 51 60.8
Gohir.A05G180800 Gossypium hirsutum HOM05D006241 ORTHO05D007842 3.1e-09 65.1 51 60.8
Gorai.009G189100 Gossypium raimondii HOM05D006241 ORTHO05D007842 3.1e-09 65.1 51 60.8
Manes.18G006720 Manihot esculenta HOM05D006241 ORTHO05D007842 3.1e-09 65.1 50 64.0
Phvul.011G027800 Phaseolus vulgaris HOM05D006241 ORTHO05D007842 3.1e-09 65.1 50 60.0
CANSAT54G0965 Cannabis sativa HOM05D006241 ORTHO05D007842 4.0e-09 64.7 51 60.8
BcaB05g24973 Brassica carinata HOM05D006241 ORTHO05D007842 5.3e-09 64.3 49 61.2
BcaC08g47119 Brassica carinata HOM05D006241 ORTHO05D007842 5.3e-09 64.3 49 61.2
BcaC08g47281 Brassica carinata HOM05D006241 ORTHO05D007842 5.3e-09 64.3 49 61.2
A07p41770 Brassica napus HOM05D006241 ORTHO05D007842 5.3e-09 64.3 49 61.2
C06p50150 Brassica napus HOM05D006241 ORTHO05D007842 5.3e-09 64.3 49 61.2
BolC6t40055H Brassica oleracea HOM05D006241 ORTHO05D007842 5.3e-09 64.3 49 61.2
BraA07t31707Z Brassica rapa HOM05D006241 ORTHO05D007842 5.3e-09 64.3 49 61.2
Duzib093G0667 Durio zibethinus HOM05D006241 ORTHO05D007842 5.3e-09 64.3 51 60.8
Lalb_Chr17g0337811 Lupinus albus HOM05D006241 ORTHO05D007842 5.3e-09 64.3 54 61.1
CiPaw.08G071900 Carya illinoinensis HOM05D006241 ORTHO05D007842 6.9e-09 63.9 51 58.8
Actinidia15484 Actinidia chinensis HOM05D006241 ORTHO05D007842 9.0e-09 63.5 52 61.5
Ah.01g001690 Amaranthus hybridus HOM05D006241 ORTHO05D007842 9.0e-09 63.5 34 76.5
Duzib041G0756 Durio zibethinus HOM05D006241 ORTHO05D007842 9.0e-09 63.5 52 57.7
Hund08526 Selenicereus undatus HOM05D006241 ORTHO05D007842 9.0e-09 63.5 35 74.3
BraA07t30500Z Brassica rapa HOM05D006241 ORTHO05D007842 1.2e-08 63.2 52 61.5
Gohir.A01G107600 Gossypium hirsutum HOM05D006241 ORTHO05D007842 1.2e-08 63.2 51 58.8
Gohir.D05G183800 Gossypium hirsutum HOM05D006241 ORTHO05D007842 1.2e-08 63.2 51 58.8
Potri.002G012700 Populus trichocarpa HOM05D006241 ORTHO05D007842 1.2e-08 63.2 50 60.0
Sabra05G0192000 Salix brachista HOM05D006241 ORTHO05D007842 1.2e-08 63.2 50 58.0
Nn6g31777 Nelumbo nucifera HOM05D006241 ORTHO05D007842 1.5e-08 62.8 37 70.3
Potri.005G248600 Populus trichocarpa HOM05D006241 ORTHO05D007842 1.5e-08 62.8 50 58.0
BcaC08g47115 Brassica carinata HOM05D006241 ORTHO05D007842 2.0e-08 62.4 48 60.4
ECA248G1104 Erigeron canadensis HOM05D006241 ORTHO05D007842 2.0e-08 62.4 55 60.0
unitig_746.g26818 Utricularia gibba HOM05D003604 ORTHO05D000209 2.0e-08 62.4 32 81.2
HPP92_021050 Vanilla planifolia HOM05D006241 ORTHO05D007842 2.0e-08 62.4 69 49.3
Ciclev10010113m.g Citrus clementina HOM05D006241 ORTHO05D007842 2.6e-08 62.0 53 56.6
TAR381G1678 Trochodendron aralioides HOM05D006241 ORTHO05D007842 2.6e-08 62.0 52 57.7
Zm00001eb356460 Zea mays HOM05D006241 ORTHO05D007842 2.6e-08 62.0 35 71.4
Dinv31923 Davidia involucrata HOM05D006241 ORTHO05D007842 3.4e-08 61.6 53 58.5
Nn5g30908 Nelumbo nucifera HOM05D006241 ORTHO05D007842 3.4e-08 61.6 53 56.6
A07p28590 Brassica napus HOM05D006241 ORTHO05D007842 4.4e-08 61.2 52 59.6
Os05g0122900 Oryza sativa ssp. japonica HOM05D006241 ORTHO05D007842 4.4e-08 61.2 36 75.0
Zm00001eb294120 Zea mays HOM05D006241 ORTHO05D007842 4.4e-08 61.2 34 73.5
Sabra07G0051400 Salix brachista HOM05D006241 ORTHO05D349851 7.6e-08 60.5 36 63.9
MBI19_g35281_MAGBIO Magnolia biondii HOM05D006241 ORTHO05D007842 1.7e-07 59.3 33 72.7
BraA02t07081Z Brassica rapa HOM05D006241 ORTHO05D007842 2.9e-07 58.5 48 58.3
BcaC08g45539 Brassica carinata HOM05D006241 ORTHO05D007842 6.4e-07 57.4 52 57.7
C06p32170 Brassica napus HOM05D006241 ORTHO05D007842 6.4e-07 57.4 52 57.7
BolC6t38340H Brassica oleracea HOM05D006241 ORTHO05D007842 6.4e-07 57.4 52 57.7
BolC2t09367H Brassica oleracea HOM05D006241 ORTHO05D007842 8.4e-07 57.0 47 57.4
AagrBONN_evm.TU.Sc2ySwM_117.850 Anthoceros agrestis HOM05D006241 ORTHO05D007842 1.1e-06 56.6 53 56.6
CDE05G0950 Ceratophyllum demersum HOM05D006241 ORTHO05D007842 1.1e-06 56.6 36 66.7
CDE05G1511 Ceratophyllum demersum HOM05D006241 ORTHO05D007842 1.1e-06 56.6 36 66.7


User provided reference genes

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