Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013881 Daucus carota HOM05D007731 ORTHO05D008483 6.8e-97 357.5 196 100.0
Dinv39536 Davidia involucrata HOM05D007731 ORTHO05D008483 2.9e-15 86.3 151 45.0
Hma1.2p1_0733F.1_g210180 Hydrangea macrophylla HOM05D007731 ORTHO05D008483 1.4e-14 84.0 203 36.0
ECA233G0921 Erigeron canadensis HOM05D007731 ORTHO05D008483 2.5e-14 83.2 212 35.4
arahy.Tifrunner.gnm1.ann1.WY2XWP Arachis hypogaea HOM05D007731 ORTHO05D008483 3.2e-14 82.8 138 43.5
TAR628G0423 Trochodendron aralioides HOM05D007731 ORTHO05D008483 5.5e-14 82.0 205 32.7
CSS0031900 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 7.2e-14 81.6 133 43.6
arahy.Tifrunner.gnm1.ann1.3IU0NQ Arachis hypogaea HOM05D007731 ORTHO05D008483 2.1e-13 80.1 138 42.0
Cfa013976 Carpinus fangiana HOM05D007731 ORTHO05D008483 4.6e-13 79.0 155 40.6
CSS0037397 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 7.9e-13 78.2 133 45.1
Duzib093G0569 Durio zibethinus HOM05D007731 ORTHO05D008483 1.0e-12 77.8 208 35.1
CiPaw.08G067400 Carya illinoinensis HOM05D007731 ORTHO05D008483 1.8e-12 77.0 155 40.0
Lj4P799T27 Lonicera japonica HOM05D007731 ORTHO05D008483 1.8e-12 77.0 203 33.5
Haze_22661 Corylus avellana HOM05D007731 ORTHO05D008483 5.1e-12 75.5 155 39.4
Thecc.08G047100 Theobroma cacao HOM05D007731 ORTHO05D008483 6.7e-12 75.1 229 34.1
COL.COLO4_26124 Corchorus olitorius HOM05D007731 ORTHO05D008483 8.8e-12 74.7 165 41.8
MSTRG.25262 Avicennia marina HOM05D007731 ORTHO05D008483 1.1e-11 74.3 231 32.0
Sabra02G0016000 Salix brachista HOM05D007731 ORTHO05D008483 1.1e-11 74.3 158 36.1
CANSAT25G3722 Cannabis sativa HOM05D007731 ORTHO05D008483 1.5e-11 73.9 158 36.7
Ciclev10002425m.g Citrus clementina HOM05D007731 ORTHO05D008483 1.5e-11 73.9 152 41.4
Phvul.009G009600 Phaseolus vulgaris HOM05D007731 ORTHO05D008483 2.5e-11 73.2 138 42.0
QL02p012129 Quercus lobata HOM05D007731 ORTHO05D008483 2.5e-11 73.2 159 40.9
CiPaw.07G147300 Carya illinoinensis HOM05D007731 ORTHO05D008483 3.3e-11 72.8 154 39.0
Cc00_g29330 Coffea canephora HOM05D007731 ORTHO05D008483 4.3e-11 72.4 229 33.2
Lj1g0026139 Lotus japonicus HOM05D007731 ORTHO05D008483 7.4e-11 71.6 161 37.9
TAR376G0482 Trochodendron aralioides HOM05D007731 ORTHO05D008483 9.7e-11 71.2 152 36.8
Actinidia16998 Actinidia chinensis HOM05D007731 ORTHO05D008483 1.3e-10 70.9 169 34.9
Psat0s2878g0040 Pisum sativum HOM05D007731 ORTHO05D008483 1.3e-10 70.9 139 38.8
TPR.G34549 Trifolium pratense HOM05D007731 ORTHO05D008483 1.7e-10 70.5 140 39.3
TWI12G0892 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 2.8e-10 69.7 169 36.7
Medtr3g113660 Medicago truncatula HOM05D007731 ORTHO05D008483 3.7e-10 69.3 139 40.3
VMungo1309G0548 Vigna mungo HOM05D007731 ORTHO05D008483 3.7e-10 69.3 134 37.3
CSS0005102 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 6.3e-10 68.6 211 34.1
Glyma.06G023400 Glycine max HOM05D007731 ORTHO05D008483 6.3e-10 68.6 129 41.1
TWI56G0526 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 6.3e-10 68.6 151 37.7
PGR031G1853 Punica granatum HOM05D007731 ORTHO05D008483 1.1e-09 67.8 144 38.9
Lsat_1_v5_gn_8_30081 Lactuca sativa HOM05D007731 ORTHO05D008483 1.4e-09 67.4 149 36.9
Gohir.D05G188100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.8e-09 67.0 165 35.2
Manes.18G011966 Manihot esculenta HOM05D007731 ORTHO05D008483 1.8e-09 67.0 167 37.7
Gohir.A05G185300 Gossypium hirsutum HOM05D007731 ORTHO05D008483 2.4e-09 66.6 164 32.9
Manes.05G145300 Manihot esculenta HOM05D007731 ORTHO05D008483 2.4e-09 66.6 202 32.2
Glyma.04G023500 Glycine max HOM05D007731 ORTHO05D008483 3.1e-09 66.2 141 40.4
CSS0046256 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 4.1e-09 65.9 211 33.6
Sed0013309 Sechium edule HOM05D007731 ORTHO05D008483 4.1e-09 65.9 153 39.2
Cpa.g.sc26.305 Carica papaya HOM05D007731 ORTHO05D008483 5.3e-09 65.5 198 32.3
Ca_15482_v3 Cicer arietinum L. HOM05D007731 ORTHO05D008483 5.3e-09 65.5 110 43.6
ClCG08G014190 Citrullus lanatus HOM05D007731 ORTHO05D008483 5.3e-09 65.5 186 34.4
Sc15g0004830 Simmondsia chinensis HOM05D007731 ORTHO05D008483 5.3e-09 65.5 145 39.3
Gorai.009G193400 Gossypium raimondii HOM05D007731 ORTHO05D008483 6.9e-09 65.1 164 32.9
Gohir.A02G083100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 9.1e-09 64.7 71 50.7
Aqoxy6G02285 Aquilegia oxysepala HOM05D007731 ORTHO05D008483 1.2e-08 64.3 165 37.0
Actinidia15437 Actinidia chinensis HOM05D007731 ORTHO05D008483 1.5e-08 63.9 198 33.3
PSO541G3821 Papaver somniferum HOM05D007731 ORTHO05D008483 1.5e-08 63.9 85 44.7
Lalb_Chr23g0266081 Lupinus albus HOM05D007731 ORTHO05D008483 2.0e-08 63.5 152 36.8
Gohir.A01G110400 Gossypium hirsutum HOM05D007731 ORTHO05D008483 3.4e-08 62.8 174 35.1
Prupe.1G363100 Prunus persica HOM05D007731 ORTHO05D008483 3.4e-08 62.8 173 31.8
CsaV3_3G045970 Cucumis sativus L. HOM05D007731 ORTHO05D008483 4.5e-08 62.4 169 33.1
Gorai.002G122700 Gossypium raimondii HOM05D007731 ORTHO05D008483 4.5e-08 62.4 109 39.4
Nn6g32002 Nelumbo nucifera HOM05D007731 ORTHO05D008483 1.3e-07 60.8 165 32.1
Potri.002G019700 Populus trichocarpa HOM05D007731 ORTHO05D008483 1.3e-07 60.8 158 32.9
Potri.005G241800 Populus trichocarpa HOM05D007731 ORTHO05D008483 1.3e-07 60.8 156 36.5
Sopen04g035340 Solanum pennellii HOM05D007731 ORTHO05D008483 1.3e-07 60.8 49 63.3
PGSC0003DMG400009876 Solanum tuberosum HOM05D007731 ORTHO05D008483 1.3e-07 60.8 49 63.3
Rhsim06G0016400 Rhododendron simsii HOM05D007731 ORTHO05D008483 1.7e-07 60.5 126 34.9
Gohir.D01G097000 Gossypium hirsutum HOM05D007731 ORTHO05D008483 2.2e-07 60.1 109 38.5
Gohir.D02G098500 Gossypium hirsutum HOM05D007731 ORTHO05D008483 3.8e-07 59.3 151 33.1
Gorai.005G112400 Gossypium raimondii HOM05D007731 ORTHO05D008483 3.8e-07 59.3 151 33.1
CsaV3_2G024250 Cucumis sativus L. HOM05D007731 ORTHO05D008483 5.0e-07 58.9 152 38.2
FvH4_2g38210 Fragaria vesca HOM05D007731 ORTHO05D008483 5.0e-07 58.9 204 37.3
Rhsim06G0019700 Rhododendron simsii HOM05D007731 ORTHO05D008483 6.5e-07 58.5 126 34.9
FAN15G0282 Fragaria x ananassa HOM05D007731 ORTHO05D008483 8.5e-07 58.2 204 36.3
RcHm_v2.0_Chr6g0303181 Rosa chinensis HOM05D007731 ORTHO05D008483 1.1e-06 57.8 234 32.1
Nn5g30769 Nelumbo nucifera HOM05D007731 ORTHO05D008483 1.4e-06 57.4 141 34.0
FAN27G0472 Fragaria x ananassa HOM05D007731 ORTHO05D008483 2.5e-06 56.6 208 34.6
SGA_v2.0_scaffold92G28205 Striga asiatica HOM05D007731 ORTHO05D008483 2.5e-06 56.6 215 31.6
Sabra05G0187200 Salix brachista HOM05D007731 ORTHO05D008483 3.2e-06 56.2 167 32.9
Duzib151G0850 Durio zibethinus HOM05D001921 ORTHO05D001784 4.2e-06 55.8 109 38.5
Eucgr.H00961 Eucalyptus grandis HOM05D007731 ORTHO05D008483 5.5e-06 55.5 191 29.3
BcaC05g25901 Brassica carinata HOM05D009961 ORTHO05D008483 7.2e-06 55.1 142 37.3
C05p18560 Brassica napus HOM05D009961 ORTHO05D008483 7.2e-06 55.1 142 37.3
BolC5t30567H Brassica oleracea HOM05D009961 ORTHO05D008483 7.2e-06 55.1 142 37.3
Atru.chr7.2506 Acer truncatum HOM05D001921 ORTHO05D001784 9.4e-06 54.7 119 37.8


User provided reference genes

Program Settings