Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 1.4e-79 299.7 167 100.0
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 1.8e-34 149.8 127 64.6
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 3.1e-34 149.1 106 73.6
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 6.9e-34 147.9 132 63.6
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 9.1e-34 147.5 105 71.4
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 3.4e-33 145.6 131 64.1
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 5.9e-33 144.8 133 60.9
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 7.7e-33 144.4 129 62.8
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 1.0e-32 144.1 118 65.3
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 1.7e-32 143.3 136 61.0
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 1.7e-32 143.3 125 62.4
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 2.2e-32 142.9 129 64.3
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 6.5e-32 141.4 115 67.8
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 8.5e-32 141.0 109 68.8
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 8.5e-32 141.0 96 75.0
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 8.5e-32 141.0 144 57.6
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 8.5e-32 141.0 98 73.5
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 8.5e-32 141.0 127 62.2
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 1.1e-31 140.6 127 61.4
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 5.5e-31 138.3 117 64.1
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 7.2e-31 137.9 144 57.6
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 7.2e-31 137.9 132 59.1
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 9.4e-31 137.5 131 60.3
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 2.1e-30 136.3 128 61.7
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 2.1e-30 136.3 148 56.8
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 3.6e-30 135.6 109 66.1
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 4.7e-30 135.2 110 65.5
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 6.1e-30 134.8 94 72.3
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 7.9e-30 134.4 94 73.4
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 7.9e-30 134.4 146 57.5
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 1.0e-29 134.0 94 72.3
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 1.0e-29 134.0 147 57.8
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 1.0e-29 134.0 88 77.3
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 1.4e-29 133.7 126 61.1
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 2.3e-29 132.9 103 66.0
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 2.3e-29 132.9 141 56.0
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 2.3e-29 132.9 137 57.7
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 2.3e-29 132.9 140 52.9
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 3.0e-29 132.5 98 68.4
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 3.9e-29 132.1 131 57.3
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 3.9e-29 132.1 142 57.0
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 3.9e-29 132.1 154 55.2
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 3.9e-29 132.1 124 59.7
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 3.9e-29 132.1 92 71.7
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 5.1e-29 131.7 142 56.3
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 5.1e-29 131.7 145 53.8
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 6.7e-29 131.3 116 62.9
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 2.0e-28 129.8 100 68.0
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 2.0e-28 129.8 144 56.2
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 2.6e-28 129.4 140 54.3
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 4.4e-28 128.6 128 56.2
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 5.7e-28 128.3 131 55.7
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 5.7e-28 128.3 131 55.7
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 5.7e-28 128.3 153 52.9
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 7.4e-28 127.9 131 55.7
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 9.7e-28 127.5 121 59.5
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.2e-27 126.3 131 55.0
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 2.2e-27 126.3 146 52.7
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 2.8e-27 125.9 137 54.7
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 3.7e-27 125.6 141 52.5
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 3.7e-27 125.6 151 53.0
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 6.3e-27 124.8 146 51.4
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 8.2e-27 124.4 145 54.5
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 1.4e-26 123.6 140 49.3
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 1.4e-26 123.6 142 55.6
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 2.4e-26 122.9 131 58.8
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 4.1e-26 122.1 127 52.8
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 6.9e-26 121.3 135 52.6
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 1.5e-25 120.2 127 54.3
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 1.5e-25 120.2 121 54.5
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 2.0e-25 119.8 93 63.4
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 2.6e-25 119.4 102 60.8
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 5.9e-25 118.2 93 65.6
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 1.0e-24 117.5 127 54.3
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 1.0e-24 117.5 84 69.0
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 1.3e-24 117.1 137 49.6
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 1.7e-24 116.7 83 72.3
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 1.7e-24 116.7 142 51.4
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 2.2e-24 116.3 117 52.1
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 6.5e-24 114.8 83 69.9
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 1.1e-23 114.0 125 50.4
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 1.1e-23 114.0 95 58.9
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 1.1e-23 114.0 116 56.0
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 1.4e-23 113.6 126 51.6
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 1.9e-23 113.2 90 61.1
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 1.9e-23 113.2 90 61.1
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 3.2e-23 112.5 135 51.1
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 3.2e-23 112.5 135 52.6
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 4.2e-23 112.1 92 58.7
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 4.2e-23 112.1 95 57.9
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 4.2e-23 112.1 144 47.9
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 7.2e-23 111.3 90 60.0
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 2.1e-22 109.8 89 61.8
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 2.7e-22 109.4 88 60.2
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 1.0e-21 107.5 161 41.6
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 5.2e-21 105.1 100 56.0
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 8.8e-21 104.4 84 61.9
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 1.5e-20 103.6 119 48.7
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 4.4e-20 102.1 94 54.3
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 1.3e-19 100.5 73 71.2
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 1.7e-19 100.1 138 45.7
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 8.2e-19 97.8 104 51.0
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 1.6e-17 93.6 89 48.3
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 2.0e-17 93.2 93 48.4
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 2.0e-17 93.2 81 61.7
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 5.9e-17 91.7 91 52.7
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 1.0e-16 90.9 106 50.0
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 3.8e-16 89.0 128 38.3
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 3.8e-16 89.0 52 84.6
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 8.5e-16 87.8 144 41.0
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 6.1e-14 81.6 89 46.1
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 1.3e-11 73.9 142 36.6


User provided reference genes

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