Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013689 Daucus carota HOM05D006263 ORTHO05D007549 1.1e-200 703.0 339 100.0
Lj2A357T95 Lonicera japonica HOM05D006263 ORTHO05D007549 3.7e-151 538.5 348 75.0
Dinv14580 Davidia involucrata HOM05D006263 ORTHO05D007549 1.4e-150 536.6 346 72.8
Nitab4.5_0002825g0060 Nicotiana tabacum HOM05D006263 ORTHO05D007549 9.8e-144 513.8 338 69.2
Nitab4.5_0000001g0100 Nicotiana tabacum HOM05D006263 ORTHO05D007549 8.3e-143 510.8 338 68.9
Oeu060008.1 Olea europaea HOM05D006263 ORTHO05D007549 8.3e-143 510.8 341 69.8
GSVIVG01033398001 Vitis vinifera HOM05D006263 ORTHO05D007549 1.4e-142 510.0 335 70.7
CAN.G216.5 Capsicum annuum HOM05D006263 ORTHO05D007549 7.0e-142 507.7 338 69.5
Solyc10g050850.2 Solanum lycopersicum HOM05D006263 ORTHO05D007549 7.0e-142 507.7 337 69.7
Rhsim04G0087300 Rhododendron simsii HOM05D006263 ORTHO05D007549 3.5e-141 505.4 349 69.1
Sopen10g022420 Solanum pennellii HOM05D006263 ORTHO05D007549 4.5e-141 505.0 337 69.1
PGSC0003DMG400008259 Solanum tuberosum HOM05D006263 ORTHO05D007549 1.3e-140 503.4 337 69.7
COL.COLO4_13602 Corchorus olitorius HOM05D006263 ORTHO05D007549 2.9e-140 502.3 341 70.4
TAR623G0038 Trochodendron aralioides HOM05D006263 ORTHO05D007549 6.5e-140 501.1 342 69.6
Lsat_1_v5_gn_1_59641 Lactuca sativa HOM05D006263 ORTHO05D007549 1.9e-139 499.6 344 70.1
TWI34G1357 Tripterygium wilfordii HOM05D006263 ORTHO05D007549 2.5e-139 499.2 348 69.3
CSS0025413 Camellia sinensis var. sinensis HOM05D006263 ORTHO05D007549 4.2e-139 498.4 332 70.8
Migut.B01469 Erythranthe guttata HOM05D006263 ORTHO05D007549 4.2e-139 498.4 337 67.4
Gorai.007G289300 Gossypium raimondii HOM05D006263 ORTHO05D007549 1.2e-138 496.9 340 68.2
Haze_19445 Corylus avellana HOM05D006263 ORTHO05D007549 4.7e-138 495.0 339 69.9
HanXRQChr01g0024721 Helianthus annuus HOM05D006263 ORTHO05D007549 4.7e-138 495.0 348 67.8
Ciclev10020896m.g Citrus clementina HOM05D006263 ORTHO05D007549 6.1e-138 494.6 340 67.9
Haze_19416 Corylus avellana HOM05D006263 ORTHO05D007549 6.1e-138 494.6 339 69.6
Duzib177G1028 Durio zibethinus HOM05D006263 ORTHO05D007549 8.0e-138 494.2 340 69.4
Prupe.7G003700 Prunus persica HOM05D006263 ORTHO05D007549 1.0e-137 493.8 333 69.7
Gohir.D11G269500 Gossypium hirsutum HOM05D006263 ORTHO05D007549 2.3e-137 492.7 340 67.6
Gohir.A11G259300 Gossypium hirsutum HOM05D006263 ORTHO05D007549 4.0e-137 491.9 340 67.6
Thecc.05G294200 Theobroma cacao HOM05D006263 ORTHO05D007549 5.2e-137 491.5 342 67.8
Nn7g35844 Nelumbo nucifera HOM05D006263 ORTHO05D007549 6.8e-137 491.1 338 70.1
Sabra19G0044500 Salix brachista HOM05D006263 ORTHO05D007549 3.4e-136 488.8 336 70.5
Hund06464 Selenicereus undatus HOM05D006263 ORTHO05D007549 3.4e-136 488.8 335 69.0
BraA10t44195Z Brassica rapa HOM05D006263 ORTHO05D007549 4.4e-136 488.4 332 67.8
ECA285G0004 Erigeron canadensis HOM05D006263 ORTHO05D007549 4.4e-136 488.4 339 67.8
Cfa016439 Carpinus fangiana HOM05D006263 ORTHO05D007549 5.7e-136 488.0 339 69.0
C09p58780 Brassica napus HOM05D006263 ORTHO05D007549 7.5e-136 487.6 332 66.9
Aqoxy1G00489 Aquilegia oxysepala HOM05D006263 ORTHO05D007549 2.2e-135 486.1 341 67.7
BcaC04g18720 Brassica carinata HOM05D006263 ORTHO05D007549 2.2e-135 486.1 332 66.9
Glyma.16G153300 Glycine max HOM05D006263 ORTHO05D007549 2.2e-135 486.1 331 70.4
Cc06_g22910 Coffea canephora HOM05D006263 ORTHO05D007549 4.9e-135 485.0 338 68.6
Potri.019G034400 Populus trichocarpa HOM05D006263 ORTHO05D007549 4.9e-135 485.0 336 69.3
Manes.09G141600 Manihot esculenta HOM05D006263 ORTHO05D007549 6.3e-135 484.6 338 68.9
A10p21320 Brassica napus HOM05D006263 ORTHO05D007549 1.8e-134 483.0 332 66.9
BolC9t58720H Brassica oleracea HOM05D006263 ORTHO05D007549 2.4e-134 482.6 333 66.4
Phvul.004G080400 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 3.1e-134 482.3 331 70.4
QL07p019666 Quercus lobata HOM05D006263 ORTHO05D007549 3.1e-134 482.3 341 66.6
SGA_v2.0_scaffold145G36025 Striga asiatica HOM05D006263 ORTHO05D007549 7.0e-134 481.1 339 64.3
VMungo0464G2181 Vigna mungo HOM05D006263 ORTHO05D007549 7.0e-134 481.1 333 69.4
MSTRG.20649 Avicennia marina HOM05D006263 ORTHO05D007549 1.2e-133 480.3 339 67.3
Potri.006G233200 Populus trichocarpa HOM05D006263 ORTHO05D007549 2.0e-133 479.6 337 67.7
ClCG05G001960 Citrullus lanatus HOM05D006263 ORTHO05D007549 4.5e-133 478.4 337 65.6
Carub.0006s1648 Capsella rubella HOM05D006263 ORTHO05D007549 7.8e-133 477.6 332 66.6
Atru.chr2.1379 Acer truncatum HOM05D006263 ORTHO05D007549 1.7e-132 476.5 338 67.5
Lj6g0008715 Lotus japonicus HOM05D006263 ORTHO05D007549 1.7e-132 476.5 330 69.1
AT5G18200 Arabidopsis thaliana HOM05D006263 ORTHO05D007549 2.9e-132 475.7 332 65.7
BcaB08g36696 Brassica carinata HOM05D006263 ORTHO05D007549 2.9e-132 475.7 330 66.1
Sp6g26120 Schrenkiella parvula HOM05D006263 ORTHO05D007549 5.0e-132 474.9 332 66.0
AL6G29400 Arabidopsis lyrata HOM05D006263 ORTHO05D007549 8.6e-132 474.2 332 66.0
CiPaw.10G000900 Carya illinoinensis HOM05D006263 ORTHO05D007549 2.5e-131 472.6 344 66.0
MELO3C006156.2 Cucumis melo HOM05D006263 ORTHO05D007549 2.5e-131 472.6 338 65.4
Thhalv10013996m.g Eutrema salsugineum HOM05D006263 ORTHO05D007549 2.5e-131 472.6 332 66.3
PSO339G1401 Papaver somniferum HOM05D006263 ORTHO05D007549 3.3e-131 472.2 338 65.7
CARHR194860 Cardamine hirsuta HOM05D006263 ORTHO05D007549 7.3e-131 471.1 335 64.8
MD12G1003100 Malus domestica HOM05D006263 ORTHO05D007549 9.5e-131 470.7 344 65.4
Psat1g096040 Pisum sativum HOM05D006263 ORTHO05D007549 2.8e-130 469.2 332 67.5
CANSAT78G2484 Cannabis sativa HOM05D006263 ORTHO05D007549 4.7e-130 468.4 343 64.4
PGR042G1093 Punica granatum HOM05D006263 ORTHO05D007549 4.7e-130 468.4 338 65.4
Peaxi162Scf00076g01055 Petunia axillaris HOM05D006263 ORTHO05D007549 1.4e-129 466.8 339 66.1
Lalb_Chr06g0173981 Lupinus albus HOM05D006263 ORTHO05D007549 1.8e-129 466.5 341 66.9
PSO384G1918 Papaver somniferum HOM05D006263 ORTHO05D007549 1.8e-129 466.5 337 65.0
TAR369G0989 Trochodendron aralioides HOM05D006263 ORTHO05D007549 1.8e-129 466.5 341 67.2
THA.LOC104827270 Tarenaya hassleriana HOM05D006263 ORTHO05D007549 4.0e-129 465.3 336 64.6
unitig_26.g9717 Utricularia gibba HOM05D006263 ORTHO05D007549 1.2e-128 463.8 334 62.9
Sabra19G0042300 Salix brachista HOM05D006263 ORTHO05D007549 1.5e-128 463.4 382 61.8
RcHm_v2.0_Chr3g0497171 Rosa chinensis HOM05D006263 ORTHO05D007549 9.8e-128 460.7 341 64.8
AUR62012878 Chenopodium quinoa HOM05D006263 ORTHO05D007549 8.3e-127 457.6 337 64.4
Ca_04490_v3 Cicer arietinum L. HOM05D006263 ORTHO05D007549 3.2e-126 455.7 337 66.5
AUR62027102 Chenopodium quinoa HOM05D006263 ORTHO05D007549 5.4e-126 454.9 337 63.5
Medtr6g029470 Medicago truncatula HOM05D006263 ORTHO05D007549 2.7e-125 452.6 335 65.7
Aa31LG11G11400 Aethionema arabicum HOM05D006263 ORTHO05D007549 6.0e-125 451.4 366 60.4
arahy.Tifrunner.gnm1.ann1.NGU2DL Arachis hypogaea HOM05D006263 ORTHO05D007549 1.0e-124 450.7 340 64.1
HPP92_015639 Vanilla planifolia HOM05D006263 ORTHO05D007549 3.0e-124 449.1 342 62.3
Eucgr.L01413 Eucalyptus grandis HOM05D006263 ORTHO05D007549 5.0e-124 448.4 340 61.5
Eucgr.K02258 Eucalyptus grandis HOM05D006263 ORTHO05D007549 1.5e-123 446.8 340 61.2
vmacro09144 Vaccinium macrocarpon HOM05D006263 ORTHO05D007549 4.3e-123 445.3 341 62.2
FAN23G2537 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.1e-122 443.0 332 64.8
FvH4_1g28080 Fragaria vesca HOM05D006263 ORTHO05D007549 4.7e-122 441.8 332 64.2
FAN19G0970 Fragaria x ananassa HOM05D006263 ORTHO05D007549 6.2e-122 441.4 332 64.2
FAN28G0550 Fragaria x ananassa HOM05D006263 ORTHO05D007549 8.9e-121 437.6 332 64.5
FAN26G0246 Fragaria x ananassa HOM05D006263 ORTHO05D007549 5.8e-120 434.9 332 63.9
ATR0697G038 Amborella trichopoda HOM05D006263 ORTHO05D007549 7.5e-120 434.5 376 60.1
FAN28G1368 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.2e-119 433.0 332 63.0
SalBow5G0264 Salvia bowleyana HOM05D006263 ORTHO05D007549 8.3e-119 431.0 339 60.5
Actinidia17306 Actinidia chinensis HOM05D000412 ORTHO05D000429 3.5e-117 425.6 290 70.3
Cpa.g.sc51.112 Carica papaya HOM05D006263 ORTHO05D007549 1.3e-116 423.7 350 61.1
CDE02G1162 Ceratophyllum demersum HOM05D006263 ORTHO05D007549 3.9e-116 422.2 340 60.0
Ca_04491_v3 Cicer arietinum L. HOM05D006263 ORTHO05D000429 3.9e-116 422.2 333 60.7
Zm00001eb301000 Zea mays HOM05D006263 ORTHO05D007549 1.9e-115 419.9 344 57.8
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 1.6e-114 416.8 333 59.2
EL10Ac9g22064 Beta vulgaris HOM05D006263 ORTHO05D007549 3.6e-114 415.6 337 59.6
Psat1g096000 Pisum sativum HOM05D006263 ORTHO05D007549 7.5e-112 407.9 333 59.5
Sc18g0007080 Simmondsia chinensis HOM05D006263 ORTHO05D007549 1.2e-109 400.6 335 60.3
Ah.01g007390 Amaranthus hybridus HOM05D006263 ORTHO05D007549 3.0e-108 396.0 427 48.5
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 9.5e-107 391.0 333 56.8
Oeu003888.1 Olea europaea HOM05D006263 ORTHO05D007549 1.2e-104 384.0 264 67.8
MBI11_g31289_MAGBIO Magnolia biondii HOM05D006263 ORTHO05D007549 5.8e-104 381.7 348 56.0
SEGI_37923 Sequoiadendron giganteum HOM05D006263 ORTHO05D007549 1.1e-102 377.5 337 54.6
CsaV3_3G009370 Cucumis sativus L. HOM05D006263 ORTHO05D007549 1.9e-91 340.1 251 64.5
Sed0020840 Sechium edule HOM05D006263 ORTHO05D007549 1.6e-90 337.0 256 64.1
Eucgr.A02096 Eucalyptus grandis HOM05D006263 ORTHO05D007549 2.4e-89 333.2 292 57.5
Os07g0171200 Oryza sativa ssp. japonica HOM05D006263 ORTHO05D007549 1.5e-83 313.9 240 60.4
Hma1.2p1_0376F.1_g139150 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 5.8e-80 302.0 188 71.8
Hma1.2p1_0376F.1_g139140 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 7.6e-80 301.6 183 73.2
Pp3c17_20460 Physcomitrium patens HOM05D006263 ORTHO05D007549 7.4e-75 285.0 342 43.3
Mapoly0103s0062 Marchantia polymorpha HOM05D006263 ORTHO05D007549 9.6e-75 284.6 341 43.7
SMO367G0539 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 3.4e-64 249.6 336 40.8
FAN16G0439 Fragaria x ananassa HOM05D006263 ORTHO05D007549 9.4e-62 241.5 203 61.1
Hma1.2p1_0376F.1_g139120 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 4.4e-51 206.1 166 65.7
Pp3c2_1350 Physcomitrium patens HOM05D006263 ORTHO05D007549 1.7e-47 194.1 264 39.4
FAN18G1683 Fragaria x ananassa HOM05D000349 ORTHO05D007549 1.1e-46 191.4 198 54.5
RhsimUnG0048700 Rhododendron simsii HOM05D006263 ORTHO05D007549 1.4e-46 191.0 179 54.7
FAN06G4136 Fragaria x ananassa HOM05D000349 ORTHO05D007549 1.1e-43 181.4 184 54.9
FAN18G1526 Fragaria x ananassa HOM05D000349 ORTHO05D007549 2.2e-39 167.2 176 54.5
FAN24G0044 Fragaria x ananassa HOM05D006263 ORTHO05D007549 4.7e-37 159.5 207 46.4
TPR.G18346 Trifolium pratense HOM05D006263 ORTHO05D007549 4.8e-26 122.9 81 69.1
SMO275G0019 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 7.2e-22 109.0 129 39.5
SMO367G0580 Selaginella moellendorffii HOM05D006263 ORTHO05D378923 1.8e-17 94.4 107 40.2
FAN03G3217 Fragaria x ananassa HOM05D002676 ORTHO05D003194 2.7e-16 90.5 60 66.7
FAN11G1140 Fragaria x ananassa HOM05D002676 ORTHO05D003194 2.7e-16 90.5 60 66.7
FAN22G0360 Fragaria x ananassa HOM05D002676 ORTHO05D003194 2.7e-16 90.5 60 66.7
FAN22G1437 Fragaria x ananassa HOM05D002676 ORTHO05D007549 2.3e-15 87.4 60 65.0
FAN15G0659 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.9e-15 87.0 170 37.1
FAN22G0951 Fragaria x ananassa HOM05D000005 ORTHO05D000294 2.5e-14 84.0 74 58.1
FAN25G1138 Fragaria x ananassa HOM05D012843 ORTHO05D017973 3.3e-14 83.6 74 59.5
FAN12G3135 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.2e-13 81.6 74 58.1
FAN08G1181 Fragaria x ananassa HOM05D003914 ORTHO05D001189 8.9e-12 75.5 53 62.3
FAN27G3525 Fragaria x ananassa HOM05D003914 ORTHO05D001189 8.9e-12 75.5 53 62.3
FAN09G2057 Fragaria x ananassa HOM05D000005 ORTHO05D000294 2.2e-10 70.9 57 59.6
SHI23126 Sapria himalayana HOM05D006263 ORTHO05D007549 5.4e-09 66.2 113 32.7
FAN22G2156 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.7e-07 61.2 65 47.7
Phvul.004G082000 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 2.3e-07 60.8 60 46.7
FAN19G1473 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.5e-06 58.2 62 50.0


User provided reference genes

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