Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013632 Daucus carota HOM05D003818 ORTHO05D175173 3.9e-51 204.5 105 100.0
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 5.0e-14 81.3 80 56.2
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 7.2e-13 77.4 94 47.9
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 1.2e-12 76.6 94 46.8
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.6e-12 76.3 95 49.5
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 3.6e-12 75.1 80 55.0
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 1.0e-11 73.6 89 50.6
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 1.4e-11 73.2 95 46.3
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 1.4e-11 73.2 95 46.3
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.8e-11 72.8 98 51.0
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 2.3e-11 72.4 83 50.6
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 2.3e-11 72.4 94 47.9
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 3.0e-11 72.0 78 53.8
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 5.2e-11 71.2 95 45.3
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 6.8e-11 70.9 94 44.7
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 8.8e-11 70.5 80 52.5
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 1.2e-10 70.1 69 59.4
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 1.2e-10 70.1 78 51.3
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 1.2e-10 70.1 78 51.3
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 1.2e-10 70.1 80 48.8
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.2e-10 70.1 98 52.0
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 3.4e-10 68.6 95 48.4
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 4.4e-10 68.2 94 45.7
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 5.7e-10 67.8 80 52.5
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 7.5e-10 67.4 100 50.0
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 7.5e-10 67.4 95 43.2
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 7.5e-10 67.4 78 56.4
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 1.7e-09 66.2 78 52.6
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 1.7e-09 66.2 78 55.1
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 2.2e-09 65.9 80 51.2
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 2.2e-09 65.9 103 44.7
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 2.2e-09 65.9 98 46.9
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 2.2e-09 65.9 80 53.8
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 2.8e-09 65.5 97 48.5
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 3.7e-09 65.1 80 51.2
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 3.7e-09 65.1 81 45.7
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 6.3e-09 64.3 80 50.0
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 1.1e-08 63.5 95 47.4
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 1.1e-08 63.5 95 47.4
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 1.1e-08 63.5 95 44.2
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 1.4e-08 63.2 78 51.3
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 1.8e-08 62.8 94 43.6
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 1.8e-08 62.8 78 48.7
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 3.1e-08 62.0 60 60.0
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 3.1e-08 62.0 98 46.9
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 3.1e-08 62.0 94 44.7
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 4.1e-08 61.6 96 43.8
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 5.4e-08 61.2 78 51.3
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 5.4e-08 61.2 98 51.0
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 5.4e-08 61.2 78 47.4
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 5.4e-08 61.2 78 47.4
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 5.4e-08 61.2 78 47.4
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 9.2e-08 60.5 98 46.9
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 9.2e-08 60.5 98 44.9
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 9.2e-08 60.5 95 43.2
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 1.2e-07 60.1 78 50.0
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 1.6e-07 59.7 78 50.0
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 1.6e-07 59.7 79 50.6
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 2.0e-07 59.3 78 52.6
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 2.0e-07 59.3 78 50.0
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 2.0e-07 59.3 95 42.1
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 2.7e-07 58.9 95 41.1
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 2.7e-07 58.9 99 45.5
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 2.7e-07 58.9 98 46.9
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 3.5e-07 58.5 78 48.7
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 3.5e-07 58.5 95 41.1
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 3.5e-07 58.5 79 49.4
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 3.5e-07 58.5 83 47.0
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 4.5e-07 58.2 60 53.3
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 5.9e-07 57.8 78 50.0
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 5.9e-07 57.8 95 41.1
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 5.9e-07 57.8 95 41.1
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 7.7e-07 57.4 95 41.1
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 1.3e-06 56.6 78 50.0
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 1.3e-06 56.6 78 47.4
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 1.3e-06 56.6 79 49.4
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 1.7e-06 56.2 78 47.4
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 2.3e-06 55.8 84 46.4
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 2.3e-06 55.8 98 44.9
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 2.9e-06 55.5 107 42.1
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 2.9e-06 55.5 98 45.9
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 2.9e-06 55.5 96 41.7
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 2.9e-06 55.5 98 42.9
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 3.8e-06 55.1 84 45.2
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 5.0e-06 54.7 78 47.4
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 5.0e-06 54.7 61 47.5
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 6.6e-06 54.3 98 43.9
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 6.6e-06 54.3 99 40.4
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 6.6e-06 54.3 80 46.2
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 6.6e-06 54.3 97 43.3
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 8.6e-06 53.9 98 42.9
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 8.6e-06 53.9 96 41.7


User provided reference genes

Program Settings