Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 8.6e-215 750.0 360 100.0
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 7.1e-193 677.2 359 87.7
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 9.2e-193 676.8 359 87.7
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 2.1e-192 675.6 359 88.6
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 1.0e-191 673.3 359 88.3
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 1.7e-191 672.5 358 88.0
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 1.9e-190 669.1 358 87.2
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.9e-190 669.1 359 86.9
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 2.5e-190 668.7 358 88.0
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 7.3e-190 667.2 358 87.7
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 2.1e-189 665.6 358 87.4
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 2.1e-189 665.6 358 88.0
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 3.6e-189 664.8 357 87.7
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 6.2e-189 664.1 357 86.8
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 1.1e-188 663.3 358 86.6
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 1.1e-188 663.3 358 87.4
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.1e-188 663.3 357 86.3
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 3.1e-188 661.8 357 86.8
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 4.0e-188 661.4 358 86.9
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 5.3e-188 661.0 358 86.0
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 9.0e-188 660.2 358 86.6
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.5e-187 659.4 357 86.3
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 2.0e-187 659.1 358 86.3
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 4.4e-187 657.9 360 86.4
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 4.4e-187 657.9 359 85.2
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 5.8e-187 657.5 357 85.2
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 5.8e-187 657.5 358 85.5
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 7.6e-187 657.1 358 86.6
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 9.9e-187 656.8 360 86.1
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 3.8e-186 654.8 357 86.0
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 1.4e-185 652.9 358 87.2
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 1.4e-185 652.9 358 85.2
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.9e-185 652.5 358 85.5
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.9e-185 652.5 358 85.5
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 3.2e-185 651.7 357 86.3
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 7.1e-185 650.6 358 85.8
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 1.6e-184 649.4 358 85.2
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 3.5e-184 648.3 369 83.5
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 4.6e-184 647.9 359 84.7
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 1.7e-183 646.0 358 84.9
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 2.3e-183 645.6 358 84.6
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 5.1e-183 644.4 358 84.9
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 6.6e-183 644.0 358 85.2
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 1.1e-182 643.3 353 85.8
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.1e-182 643.3 353 85.8
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 1.5e-182 642.9 392 78.6
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.9e-182 642.5 353 85.6
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 1.9e-182 642.5 359 85.0
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 1.9e-182 642.5 358 83.0
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 3.3e-182 641.7 358 82.7
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 4.3e-182 641.3 353 85.6
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 5.6e-182 641.0 358 83.2
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.6e-181 639.4 353 85.3
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 2.1e-181 639.0 358 82.7
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 3.6e-181 638.3 358 83.2
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 1.1e-180 636.7 358 83.2
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 2.4e-180 635.6 359 83.0
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 1.2e-179 633.3 359 82.5
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 2.0e-179 632.5 359 81.9
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 2.0e-179 632.5 416 74.3
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 3.4e-179 631.7 357 82.4
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 5.8e-179 630.9 384 78.9
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 2.9e-178 628.6 359 81.6
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 3.8e-178 628.2 357 82.9
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 8.4e-178 627.1 357 82.4
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 3.2e-177 625.2 359 81.1
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 3.2e-177 625.2 359 81.1
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 3.2e-177 625.2 359 81.1
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 3.2e-177 625.2 340 85.6
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 4.2e-177 624.8 359 80.8
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 5.4e-177 624.4 359 81.3
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 9.3e-177 623.6 358 81.8
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 1.6e-176 622.9 357 81.8
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 1.6e-176 622.9 359 80.8
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 2.1e-176 622.5 400 75.2
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 6.0e-176 620.9 359 80.2
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 2.3e-175 619.0 358 81.0
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 3.0e-175 618.6 358 81.3
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 6.7e-175 617.5 426 71.6
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 1.1e-174 616.7 358 80.4
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 4.3e-174 614.8 357 80.1
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 2.1e-173 612.5 387 74.9
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 1.1e-172 610.1 357 81.0
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 3.1e-172 608.6 357 79.3
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 3.1e-172 608.6 358 79.3
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 7.6e-171 604.0 355 79.7
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 7.6e-171 604.0 359 78.6
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 2.9e-170 602.1 359 78.3
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 3.8e-170 601.7 355 79.4
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 1.1e-169 600.1 355 79.2
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 2.1e-168 595.9 366 74.6
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 1.8e-167 592.8 366 74.0
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 6.2e-165 584.3 360 76.1
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 4.5e-163 578.2 313 87.5
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 2.9e-162 575.5 357 75.9
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 2.8e-157 558.9 336 78.0
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 6.9e-156 554.3 302 86.4
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 3.8e-154 548.5 358 73.5
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 2.3e-151 539.3 312 82.1
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 6.7e-151 537.7 306 84.0
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 1.2e-147 526.9 403 65.8
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 2.1e-144 516.2 357 68.3
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 7.9e-144 514.2 357 69.7
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 3.3e-142 508.8 357 68.3
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 5.7e-142 508.1 349 71.6
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 4.2e-137 491.9 358 66.8
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.2e-128 463.8 364 64.8
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 4.7e-128 461.8 369 61.5
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 4.7e-128 461.8 249 88.4
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 2.8e-125 452.6 242 88.8
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 1.1e-124 450.7 358 64.5
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 3.3e-113 412.5 238 81.9
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 1.3e-106 390.6 211 85.3
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 8.9e-103 377.9 205 87.3
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 1.7e-74 283.9 164 82.9
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 1.7e-66 257.3 152 75.7
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 1.2e-59 234.6 154 70.8
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 4.3e-57 226.1 126 83.3
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 9.6e-57 224.9 119 82.4
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 1.2e-43 181.4 204 50.0
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 1.6e-43 181.0 160 58.8
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 6.5e-37 159.1 98 78.6
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 5.7e-33 146.0 117 65.0
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 2.2e-24 117.5 56 92.9
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 2.8e-24 117.1 108 56.5
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 4.0e-18 96.7 79 64.6
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 1.8e-15 87.8 39 94.9
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 3.5e-14 83.6 162 36.4
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 1.3e-13 81.6 51 68.6
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 3.4e-09 67.0 312 25.6


User provided reference genes

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