Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 9.2e-123 443.7 251 100.0
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.3e-79 300.4 249 62.7
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 1.3e-79 300.4 249 69.9
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.8e-79 299.3 250 69.2
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 6.2e-79 298.1 252 69.4
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 8.1e-79 297.7 250 69.2
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 1.4e-78 297.0 250 65.2
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 4.0e-78 295.4 250 68.8
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 4.0e-78 295.4 249 68.3
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 5.3e-78 295.0 252 72.2
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 9.0e-78 294.3 256 68.4
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 9.0e-78 294.3 250 69.2
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.2e-77 293.9 245 67.3
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.2e-77 293.9 249 68.3
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 2.0e-77 293.1 250 64.4
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 2.0e-77 293.1 250 69.6
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 3.4e-77 292.4 256 69.1
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 4.5e-77 292.0 249 66.7
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 2.2e-76 289.7 249 65.1
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 8.4e-76 287.7 250 65.6
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 8.4e-76 287.7 252 67.9
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 1.1e-75 287.3 249 67.5
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 1.4e-75 287.0 250 68.8
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 1.9e-75 286.6 251 64.1
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 3.2e-75 285.8 249 65.1
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 7.1e-75 284.6 250 68.4
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 2.1e-74 283.1 249 66.3
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 7.9e-74 281.2 251 62.9
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 1.0e-73 280.8 246 67.9
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 2.3e-73 279.6 256 68.0
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 2.3e-73 279.6 256 64.8
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 3.0e-73 279.3 252 62.3
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 3.0e-73 279.3 251 63.3
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 3.0e-73 279.3 249 67.9
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 5.1e-73 278.5 251 63.3
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 6.7e-73 278.1 251 62.5
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 8.7e-73 277.7 252 62.3
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 8.7e-73 277.7 253 58.5
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 1.9e-72 276.6 253 62.1
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 4.3e-72 275.4 254 65.0
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 4.3e-72 275.4 254 57.9
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 2.1e-71 273.1 251 63.7
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 2.8e-71 272.7 252 66.3
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 8.2e-71 271.2 249 63.5
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 1.4e-70 270.4 254 68.5
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 6.9e-70 268.1 249 64.3
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 1.2e-69 267.3 279 58.4
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 1.2e-69 267.3 250 60.4
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 2.0e-69 266.5 249 64.7
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.6e-69 266.2 251 63.3
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 5.0e-68 261.9 244 59.0
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 5.0e-68 261.9 252 64.7
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 8.4e-68 261.2 254 65.7
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 3.2e-67 259.2 249 61.4
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 3.2e-67 259.2 251 63.7
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 7.2e-67 258.1 251 62.9
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 2.7e-66 256.1 258 56.6
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 3.5e-66 255.8 251 61.8
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 7.9e-66 254.6 251 61.8
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 1.0e-65 254.2 252 63.1
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 1.8e-65 253.4 252 62.7
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 1.8e-65 253.4 252 62.7
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 3.0e-65 252.7 245 59.6
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 3.9e-65 252.3 251 61.8
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 5.1e-65 251.9 251 62.9
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 5.1e-65 251.9 251 62.9
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 6.7e-65 251.5 270 55.9
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 1.5e-64 250.4 241 63.5
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 1.6e-63 246.9 252 59.5
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 2.2e-63 246.5 250 57.6
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 4.8e-63 245.4 249 58.2
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 4.8e-63 245.4 252 60.3
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 8.2e-63 244.6 254 57.1
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 1.4e-62 243.8 245 57.1
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 1.8e-62 243.4 250 57.6
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 6.9e-62 241.5 237 63.7
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 9.0e-62 241.1 252 57.9
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 9.0e-62 241.1 251 59.8
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 1.5e-61 240.4 249 57.0
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 3.4e-61 239.2 262 56.1
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 7.2e-59 231.5 252 59.5
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 1.6e-58 230.3 249 59.0
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 3.6e-58 229.2 251 59.0
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 3.6e-58 229.2 221 66.5
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 1.0e-57 227.6 240 56.7
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 5.1e-57 225.3 221 59.7
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 5.1e-57 225.3 245 58.0
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 1.7e-55 220.3 222 59.5
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 1.7e-55 220.3 183 61.2
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 2.0e-53 213.4 252 57.1
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 4.5e-53 212.2 184 62.0
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 5.9e-53 211.8 183 61.2
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 1.0e-52 211.1 205 62.4
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 3.2e-51 206.1 245 53.5
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 1.7e-47 193.7 235 49.8
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 8.2e-47 191.4 252 46.8
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 4.1e-46 189.1 184 53.8
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 1.7e-44 183.7 253 43.5
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 2.9e-44 183.0 257 43.6
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 3.8e-44 182.6 160 63.1
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.2e-43 179.5 156 64.7
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 8.0e-42 174.9 263 38.4
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 2.0e-40 170.2 257 48.2
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.2e-37 161.0 152 55.9
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 1.0e-36 157.9 274 43.4
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.7e-34 149.8 162 58.6
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 2.0e-29 133.7 126 56.3
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 1.0e-28 131.3 249 36.9
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.2e-28 130.2 95 69.5
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.2e-28 130.2 95 69.5
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 2.7e-21 106.7 234 38.5
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 1.0e-20 104.8 165 40.0
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 6.6e-20 102.1 216 38.4
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 8.0e-18 95.1 156 41.0
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 1.4e-17 94.4 335 29.0
arahy.Tifrunner.gnm1.ann1.V1GDUY Arachis hypogaea HOM05D006823 ORTHO05D008608 1.8e-14 84.0 117 44.4
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 2.0e-13 80.5 45 73.3
Zm00001eb385990 Zea mays HOM05D006823 ORTHO05D008608 3.1e-09 66.6 102 43.1
Peaxi162Scf00258g00118 Petunia axillaris HOM05D006823 ORTHO05D008608 2.2e-07 60.5 57 54.4
Zm00001eb116260 Zea mays HOM05D006823 ORTHO05D008608 3.7e-07 59.7 87 43.7
AagrBONN_evm.TU.Sc2ySwM_228.1178 Anthoceros agrestis HOM05D005384 ORTHO05D006477 9.2e-06 55.1 50 52.0
Sc22g0001400 Simmondsia chinensis HOM05D005384 ORTHO05D006477 9.2e-06 55.1 54 48.1


User provided reference genes

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