Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 8.7e-145 516.9 255 100.0
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 4.2e-75 285.4 228 64.0
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 1.8e-73 280.0 259 57.1
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 3.0e-73 279.3 249 57.8
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 7.5e-72 274.6 205 64.4
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 1.7e-71 273.5 238 58.4
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 4.9e-71 271.9 245 57.1
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 3.2e-70 269.2 243 57.2
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 2.0e-69 266.5 202 63.4
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 2.7e-69 266.2 218 60.1
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 3.5e-69 265.8 201 66.7
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 7.8e-69 264.6 242 55.4
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 7.8e-69 264.6 195 64.1
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 1.0e-68 264.2 196 65.8
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 1.0e-68 264.2 207 63.3
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 1.0e-68 264.2 201 66.2
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 1.3e-68 263.8 201 62.7
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.7e-68 263.5 194 63.9
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 2.3e-68 263.1 248 56.0
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 5.0e-68 261.9 194 63.4
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 8.6e-68 261.2 194 63.4
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 1.9e-67 260.0 251 55.4
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 1.9e-67 260.0 234 57.3
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 4.3e-67 258.8 191 63.4
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 9.5e-67 257.7 235 56.2
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 1.6e-66 256.9 213 57.7
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 2.1e-66 256.5 216 59.7
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 2.1e-66 256.5 230 55.7
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 4.7e-66 255.4 216 59.3
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 8.0e-66 254.6 222 57.2
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 1.4e-65 253.8 249 56.2
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 1.4e-65 253.8 250 54.8
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 1.4e-65 253.8 240 55.4
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 3.1e-65 252.7 247 51.0
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 4.0e-65 252.3 233 55.8
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 5.2e-65 251.9 230 55.2
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 5.2e-65 251.9 244 54.1
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 6.8e-65 251.5 263 51.7
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 8.9e-65 251.1 220 57.7
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 1.5e-64 250.4 181 64.1
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 1.5e-64 250.4 249 53.8
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 3.4e-64 249.2 248 52.4
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 9.8e-64 247.7 251 53.0
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 1.3e-63 247.3 201 59.7
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 2.2e-63 246.5 213 56.8
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 2.9e-63 246.1 205 61.5
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 2.9e-63 246.1 214 55.1
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 3.7e-63 245.7 183 63.9
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 4.9e-63 245.4 258 50.8
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 4.9e-63 245.4 233 54.1
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 6.4e-63 245.0 250 53.6
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 8.3e-63 244.6 247 52.6
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 8.3e-63 244.6 209 56.9
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 1.4e-62 243.8 234 52.1
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 1.4e-62 243.8 249 52.2
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 1.9e-62 243.4 204 58.3
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 1.9e-62 243.4 243 53.1
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 3.2e-62 242.7 206 56.8
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 3.2e-62 242.7 202 57.9
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 3.2e-62 242.7 210 58.6
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 3.2e-62 242.7 213 56.3
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 1.2e-61 240.7 268 50.0
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 1.6e-61 240.4 212 56.1
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 2.7e-61 239.6 233 53.2
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 6.0e-61 238.4 247 51.8
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 1.0e-60 237.7 195 62.6
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 1.3e-60 237.3 214 55.6
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 3.0e-60 236.1 210 59.0
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 1.5e-59 233.8 244 50.4
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 1.9e-59 233.4 242 51.7
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 3.3e-59 232.6 260 50.4
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 5.6e-59 231.9 244 50.4
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 6.2e-58 228.4 255 48.2
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 4.0e-57 225.7 142 73.2
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 8.9e-57 224.6 249 50.2
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 2.1e-53 213.4 205 53.2
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 7.8e-53 211.5 230 47.8
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 3.0e-52 209.5 191 54.5
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 4.3e-51 205.7 251 46.6
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 1.6e-50 203.8 204 49.5
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 3.6e-50 202.6 234 47.0
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 1.4e-49 200.7 259 44.8
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 4.0e-49 199.1 199 50.3
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 5.2e-49 198.7 187 48.1
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 4.9e-47 192.2 120 71.7
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 1.2e-45 187.6 195 46.7
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 1.6e-45 187.2 127 70.9
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 2.1e-34 150.2 109 63.3
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 4.8e-34 149.1 130 58.5
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 3.5e-29 132.9 211 39.8
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 3.0e-28 129.8 124 50.0
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 3.0e-28 129.8 124 51.6
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 8.4e-23 111.7 120 47.5
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 6.2e-18 95.5 109 46.8
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 7.6e-16 88.6 52 69.2
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 3.2e-14 83.2 104 43.3
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 1.5e-08 64.3 62 53.2
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 5.8e-08 62.4 75 45.3
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 3.2e-06 56.6 72 44.4


User provided reference genes

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