Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013451 Daucus carota HOM05D001890 ORTHO05D008163 4.2e-142 508.1 263 100.0
Dinv11885 Davidia involucrata HOM05D001890 ORTHO05D008163 3.6e-77 292.4 273 62.6
Ciclev10012448m.g Citrus clementina HOM05D001890 ORTHO05D008163 5.9e-72 275.0 227 64.3
Actinidia03864 Actinidia chinensis HOM05D001890 ORTHO05D008163 1.3e-71 273.9 244 59.4
Actinidia03972 Actinidia chinensis HOM05D001890 ORTHO05D008163 1.7e-71 273.5 271 56.1
Oeu045017.1 Olea europaea HOM05D001890 ORTHO05D008163 3.2e-70 269.2 199 69.3
Prupe.7G091100 Prunus persica HOM05D001890 ORTHO05D008163 1.6e-69 266.9 191 71.7
ECA233G0010 Erigeron canadensis HOM05D001890 ORTHO05D008163 2.1e-69 266.5 281 58.0
Atru.chr8.1300 Acer truncatum HOM05D001890 ORTHO05D008163 2.8e-69 266.2 209 65.1
GSVIVG01022555001 Vitis vinifera HOM05D001890 ORTHO05D008163 2.8e-69 266.2 270 55.6
Cc06_g06850 Coffea canephora HOM05D001890 ORTHO05D008163 4.7e-69 265.4 234 61.1
Rhsim03G0062200 Rhododendron simsii HOM05D001890 ORTHO05D008163 8.0e-69 264.6 252 57.1
HanXRQChr02g0053101 Helianthus annuus HOM05D001890 ORTHO05D008163 1.0e-68 264.2 259 59.1
Hma1.2p1_2851F.1_g329460 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 1.4e-68 263.8 178 74.7
Haze_20108 Corylus avellana HOM05D001890 ORTHO05D008163 1.8e-68 263.5 272 56.2
Manes.08G036100 Manihot esculenta HOM05D001890 ORTHO05D008163 1.8e-68 263.5 261 57.5
Thecc.05G108500 Theobroma cacao HOM05D001890 ORTHO05D008163 2.3e-68 263.1 261 57.5
Gorai.002G233900 Gossypium raimondii HOM05D001890 ORTHO05D008163 4.0e-68 262.3 270 56.3
FvH4_6g20780 Fragaria vesca HOM05D001890 ORTHO05D008163 5.2e-68 261.9 251 58.2
Lalb_Chr06g0173221 Lupinus albus HOM05D001890 ORTHO05D008163 5.2e-68 261.9 269 56.5
TAR369G0922 Trochodendron aralioides HOM05D001890 ORTHO05D008163 6.8e-68 261.5 254 57.9
Aqoxy1G01947 Aquilegia oxysepala HOM05D001890 ORTHO05D008163 8.9e-68 261.2 267 55.4
MSTRG.19331 Avicennia marina HOM05D001890 ORTHO05D008163 8.9e-68 261.2 192 66.1
TWI74G0853 Tripterygium wilfordii HOM05D001890 ORTHO05D008163 8.9e-68 261.2 193 68.4
FAN05G2088 Fragaria x ananassa HOM05D001890 ORTHO05D008163 1.5e-67 260.4 237 60.3
CiPaw.09G022900 Carya illinoinensis HOM05D001890 ORTHO05D008163 2.6e-67 259.6 199 66.8
RcHm_v2.0_Chr3g0476781 Rosa chinensis HOM05D001890 ORTHO05D008163 2.6e-67 259.6 190 67.9
FAN09G2968 Fragaria x ananassa HOM05D001890 ORTHO05D008163 3.4e-67 259.2 261 56.7
MD14G1043000 Malus domestica HOM05D001890 ORTHO05D008163 3.4e-67 259.2 262 55.7
Sed0014416 Sechium edule HOM05D001890 ORTHO05D008163 3.4e-67 259.2 257 55.6
TPR.G21244 Trifolium pratense HOM05D001890 ORTHO05D003442 3.4e-67 259.2 225 60.4
QL07p026864 Quercus lobata HOM05D001890 ORTHO05D008163 4.4e-67 258.8 253 58.1
MELO3C009561.2 Cucumis melo HOM05D001890 ORTHO05D008163 5.7e-67 258.5 247 57.9
Gohir.A01G200100 Gossypium hirsutum HOM05D001890 ORTHO05D008163 5.7e-67 258.5 270 55.9
FAN14G3769 Fragaria x ananassa HOM05D001890 ORTHO05D008163 1.7e-66 256.9 251 58.2
Lsat_1_v5_gn_6_34681 Lactuca sativa HOM05D001890 ORTHO05D008163 1.7e-66 256.9 255 58.4
CANSAT64G1416 Cannabis sativa HOM05D001890 ORTHO05D008163 2.2e-66 256.5 241 58.1
CsaV3_3G038180 Cucumis sativus L. HOM05D001890 ORTHO05D008163 2.2e-66 256.5 223 61.9
Migut.J00743 Erythranthe guttata HOM05D001890 ORTHO05D008163 2.2e-66 256.5 199 64.3
Gohir.D01G190200 Gossypium hirsutum HOM05D001890 ORTHO05D008163 2.8e-66 256.1 270 55.6
Eucgr.A02558 Eucalyptus grandis HOM05D001890 ORTHO05D008163 4.9e-66 255.4 203 65.5
Nn2g14391 Nelumbo nucifera HOM05D001890 ORTHO05D008163 6.3e-66 255.0 212 64.2
Potri.006G200900 Populus trichocarpa HOM05D001890 ORTHO05D008163 1.4e-65 253.8 254 56.3
MD12G1044000 Malus domestica HOM05D001890 ORTHO05D008163 1.8e-65 253.4 190 65.8
Nitab4.5_0009788g0030 Nicotiana tabacum HOM05D001890 ORTHO05D008163 2.4e-65 253.1 224 59.4
Sopen01g002850 Solanum pennellii HOM05D001890 ORTHO05D008163 2.4e-65 253.1 208 62.5
PGSC0003DMG400021337 Solanum tuberosum HOM05D001890 ORTHO05D008163 4.1e-65 252.3 208 63.0
Solyc01g006860.3 Solanum lycopersicum HOM05D001890 ORTHO05D008163 5.4e-65 251.9 208 62.5
arahy.Tifrunner.gnm1.ann1.XW59SW Arachis hypogaea HOM05D001890 ORTHO05D008163 7.0e-65 251.5 282 51.1
COL.COLO4_29517 Corchorus olitorius HOM05D001890 ORTHO05D008163 3.5e-64 249.2 273 53.5
EL10Ac5g11823 Beta vulgaris HOM05D001890 ORTHO05D008163 5.9e-64 248.4 250 54.8
Nitab4.5_0005218g0010 Nicotiana tabacum HOM05D001890 ORTHO05D008163 5.9e-64 248.4 253 54.2
arahy.Tifrunner.gnm1.ann1.59XBIZ Arachis hypogaea HOM05D001890 ORTHO05D008163 7.8e-64 248.1 259 52.5
Glyma.10G083800 Glycine max HOM05D001890 ORTHO05D008163 1.3e-63 247.3 265 52.5
Medtr1g055300 Medicago truncatula HOM05D001890 ORTHO05D008163 2.3e-63 246.5 252 54.0
MBI05_g37895_MAGBIO Magnolia biondii HOM05D001890 ORTHO05D008163 3.8e-63 245.7 265 53.2
PSO170G4460 Papaver somniferum HOM05D001890 ORTHO05D008163 3.8e-63 245.7 261 53.3
Oeu020166.1 Olea europaea HOM05D001890 ORTHO05D008163 6.6e-63 245.0 199 63.3
Phvul.007G266300 Phaseolus vulgaris HOM05D001890 ORTHO05D008163 8.6e-63 244.6 233 56.2
Sabra06G0154600 Salix brachista HOM05D001890 ORTHO05D008163 8.6e-63 244.6 194 64.9
VMungo0251G0199 Vigna mungo HOM05D001890 ORTHO05D008163 1.5e-62 243.8 248 54.0
SGA_v2.0_scaffold18G08441 Striga asiatica HOM05D001890 ORTHO05D008163 1.9e-62 243.4 193 64.2
CARHR207150 Cardamine hirsuta HOM05D001890 ORTHO05D008163 5.6e-62 241.9 217 58.5
Glyma.02G193000 Glycine max HOM05D001890 ORTHO05D008163 7.3e-62 241.5 253 52.6
Lj5g0002159 Lotus japonicus HOM05D001890 ORTHO05D008163 7.3e-62 241.5 270 50.7
AT5G06410 Arabidopsis thaliana HOM05D001890 ORTHO05D008163 3.6e-61 239.2 207 60.4
Aa31LG5G17190 Aethionema arabicum HOM05D001890 ORTHO05D008163 8.0e-61 238.0 191 62.3
Ah.12g054380 Amaranthus hybridus HOM05D001890 ORTHO05D008163 1.0e-60 237.7 197 61.9
AL6G16500 Arabidopsis lyrata HOM05D001890 ORTHO05D008163 1.4e-60 237.3 257 52.5
vmacro07500 Vaccinium macrocarpon HOM05D001890 ORTHO05D008163 1.4e-60 237.3 228 57.5
BraA10t45037Z Brassica rapa HOM05D001890 ORTHO05D008163 4.0e-60 235.7 253 52.2
Thhalv10014422m.g Eutrema salsugineum HOM05D001890 ORTHO05D008163 4.0e-60 235.7 191 60.7
BolC9t59784H Brassica oleracea HOM05D001890 ORTHO05D008163 5.2e-60 235.3 267 49.8
THA.LOC104816627 Tarenaya hassleriana HOM05D001890 ORTHO05D008163 6.8e-60 235.0 268 50.7
PSO407G0155 Papaver somniferum HOM05D001890 ORTHO05D008163 1.2e-59 234.2 204 58.8
CAN.G911.27 Capsicum annuum HOM05D001890 ORTHO05D008163 2.2e-58 229.9 281 48.8
HPP92_018252 Vanilla planifolia HOM05D001890 ORTHO05D008163 2.2e-58 229.9 195 60.0
SGA_v2.0_scaffold116G32259 Striga asiatica HOM05D001890 ORTHO05D008163 1.4e-57 227.3 287 46.7
BcaB01g05992 Brassica carinata HOM05D001890 ORTHO05D008163 1.8e-57 226.9 255 50.2
SHI39226 Sapria himalayana HOM05D001890 ORTHO05D008163 7.0e-57 224.9 191 59.7
BolC3t12860H Brassica oleracea HOM05D001890 ORTHO05D003442 1.2e-56 224.2 259 49.0
A03p02720 Brassica napus HOM05D001890 ORTHO05D008163 2.7e-56 223.0 260 48.8
C03p03150 Brassica napus HOM05D001890 ORTHO05D003442 2.7e-56 223.0 258 49.6
unitig_578.g15805 Utricularia gibba HOM05D001890 ORTHO05D008163 1.3e-55 220.7 191 59.2
ClCG10G018120 Citrullus lanatus HOM05D001890 ORTHO05D008163 1.7e-55 220.3 257 50.6
BraA03t09635Z Brassica rapa HOM05D001890 ORTHO05D008163 2.3e-55 219.9 265 47.5
ATR0697G265 Amborella trichopoda HOM05D001890 ORTHO05D008163 2.5e-54 216.5 191 59.2
CSS0004156 Camellia sinensis var. sinensis HOM05D001890 ORTHO05D008163 1.6e-53 213.8 154 72.7
Zm00001eb161520 Zea mays HOM05D001890 ORTHO05D008163 4.7e-53 212.2 203 55.2
Psat6g128200 Pisum sativum HOM05D001890 ORTHO05D008163 1.5e-51 207.2 244 48.4
FAN02G4586 Fragaria x ananassa HOM05D001890 ORTHO05D003442 7.5e-51 204.9 194 60.8
RcHm_v2.0_Chr3g0476751 Rosa chinensis HOM05D001890 ORTHO05D008163 3.7e-50 202.6 178 60.7
Sc22g0003100 Simmondsia chinensis HOM05D001890 ORTHO05D008163 7.0e-49 198.4 153 69.3
SEGI_25149 Sequoiadendron giganteum HOM05D001890 ORTHO05D008163 9.2e-49 198.0 193 51.8
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 2.0e-48 196.8 147 70.7
Os12g0456200 Oryza sativa ssp. japonica HOM05D001890 ORTHO05D008163 1.0e-47 194.5 167 58.1
PGR004G2365 Punica granatum HOM05D001890 ORTHO05D008163 2.3e-47 193.4 206 53.4
AUR62036336 Chenopodium quinoa HOM05D001890 ORTHO05D008163 1.9e-46 190.3 157 61.1
Lj3C241T9 Lonicera japonica HOM05D001890 ORTHO05D008163 1.9e-46 190.3 195 56.4
FAN05G2830 Fragaria x ananassa HOM05D001890 ORTHO05D008163 4.3e-46 189.1 144 66.7
Hund10835 Selenicereus undatus HOM05D001890 ORTHO05D008163 2.0e-43 180.3 177 56.5
AagrBONN_evm.TU.Sc2ySwM_117.1093 Anthoceros agrestis HOM05D001890 ORTHO05D008163 1.3e-42 177.6 202 46.0
Psat2g142840 Pisum sativum HOM05D001890 ORTHO05D008163 2.2e-42 176.8 145 60.0
CDE06G1636 Ceratophyllum demersum HOM05D001890 ORTHO05D000511 3.7e-42 176.0 167 53.9
Actinidia37766 Actinidia chinensis HOM05D001890 ORTHO05D008163 1.6e-40 170.6 190 52.1
Pp3c16_9340 Physcomitrium patens HOM05D001890 ORTHO05D008163 3.9e-39 166.0 189 46.0
Sp6g36440 Schrenkiella parvula HOM05D001890 ORTHO05D008163 1.9e-38 163.7 140 60.0
Cpa.g.sc104.2 Carica papaya HOM05D001890 ORTHO05D008163 7.3e-38 161.8 119 66.4
Hma1.2p1_2851F.1_g329450 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 2.4e-36 156.8 160 56.2
AUR62030695 Chenopodium quinoa HOM05D001890 ORTHO05D008163 1.5e-35 154.1 118 66.1
CBR_g70174 Chara braunii HOM05D001890 ORTHO05D008163 4.9e-34 149.1 197 43.7
Mapoly0055s0040 Marchantia polymorpha HOM05D001890 ORTHO05D008163 9.0e-28 128.3 191 39.3
Psat1g223560 Pisum sativum HOM05D001890 ORTHO05D008163 8.7e-23 111.7 100 55.0
Peaxi162Scf00675g00610 Petunia axillaris HOM05D001890 ORTHO05D008163 4.3e-22 109.4 103 58.3
Cre11.g467718 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 1.1e-20 104.8 179 37.4
Cre12.g507559 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 1.1e-20 104.8 179 37.4
Lj1g0015991 Lotus japonicus HOM05D001890 ORTHO05D008163 4.9e-18 95.9 80 63.8
SMO353G0218 Selaginella moellendorffii HOM05D001890 ORTHO05D008163 2.7e-16 90.1 123 36.6
MCO10G285 Micromonas commoda HOM05D001890 ORTHO05D008163 8.7e-15 85.1 291 29.6
CBR_g31284 Chara braunii HOM05D001890 ORTHO05D008163 6.2e-13 79.0 136 36.8
Peaxi162Scf00675g00611 Petunia axillaris HOM05D001890 ORTHO05D008163 3.1e-12 76.6 100 46.0
Lj3C241T8 Lonicera japonica HOM05D001890 ORTHO05D008163 2.6e-11 73.6 118 42.4
Lalb_Chr25g0282121 Lupinus albus HOM05D001890 ORTHO05D008163 6.4e-10 68.9 103 42.7
SalBow1G6520 Salvia bowleyana HOM05D001890 ORTHO05D008163 7.4e-06 55.5 86 40.7


User provided reference genes

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