Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013314 Daucus carota HOM05D006785 ORTHO05D006259 7.3e-136 487.6 331 100.0
Actinidia32516 Actinidia chinensis HOM05D006785 ORTHO05D006259 1.3e-47 194.5 358 40.8
Lj1P620T12 Lonicera japonica HOM05D006785 ORTHO05D006259 1.7e-47 194.1 272 57.0
Dinv07090 Davidia involucrata HOM05D006785 ORTHO05D006259 4.6e-45 186.0 360 39.4
CSS0028256 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 1.7e-44 184.1 337 37.7
CSS0047125 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 1.7e-44 184.1 337 37.7
Actinidia11204 Actinidia chinensis HOM05D006785 ORTHO05D006259 3.4e-32 143.3 356 43.8
vmacro12460 Vaccinium macrocarpon HOM05D006785 ORTHO05D006259 6.6e-28 129.0 330 33.0
Lsat_1_v5_gn_6_18081 Lactuca sativa HOM05D009485 ORTHO05D006259 8.6e-28 128.6 340 44.7
ECA233G1175 Erigeron canadensis HOM05D009485 ORTHO05D006259 2.0e-24 117.5 331 40.8
CsaV3_6G015830 Cucumis sativus L. HOM05D006785 ORTHO05D006259 4.9e-23 112.8 348 29.3
Sopen10g003690 Solanum pennellii HOM05D009485 ORTHO05D006259 4.9e-23 112.8 223 40.4
Rhsim06G0116700 Rhododendron simsii HOM05D006785 ORTHO05D006259 1.9e-22 110.9 345 40.0
ClCG02G018390 Citrullus lanatus HOM05D006785 ORTHO05D006259 6.0e-21 105.9 348 29.3
Sed0020726 Sechium edule HOM05D006785 ORTHO05D006259 6.0e-21 105.9 348 34.2
Peaxi162Scf00111g00008 Petunia axillaris HOM05D009485 ORTHO05D006259 5.1e-20 102.8 202 39.1
MSTRG.6747 Avicennia marina HOM05D009485 ORTHO05D006259 6.6e-20 102.4 164 41.5
Nitab4.5_0002027g0170 Nicotiana tabacum HOM05D009485 ORTHO05D006259 1.9e-19 100.9 220 39.1
CAN.G585.40 Capsicum annuum HOM05D009485 ORTHO05D006259 2.5e-19 100.5 160 43.1
TAR627G0640 Trochodendron aralioides HOM05D006785 ORTHO05D006259 9.6e-19 98.6 178 41.6
HanXRQChr08g0227971 Helianthus annuus HOM05D009485 ORTHO05D006259 1.6e-18 97.8 156 40.4
Nitab4.5_0001402g0020 Nicotiana tabacum HOM05D009485 ORTHO05D006259 2.1e-18 97.4 224 37.9
PGSC0003DMG400021282 Solanum tuberosum HOM05D009485 ORTHO05D006259 2.1e-18 97.4 186 41.9
Hma1.2p1_0960F.1_g241635 Hydrangea macrophylla HOM05D006785 ORTHO05D006259 6.2e-18 95.9 360 37.8
THA.LOC104800823 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 3.1e-17 93.6 227 35.2
Migut.M00503 Erythranthe guttata HOM05D009485 ORTHO05D006259 4.0e-17 93.2 240 34.6
Manes.02G084200 Manihot esculenta HOM05D006785 ORTHO05D006259 6.9e-17 92.4 335 28.1
CiPaw.03G189000 Carya illinoinensis HOM05D006785 ORTHO05D006259 1.5e-16 91.3 357 37.8
TWI59G0461 Tripterygium wilfordii HOM05D006785 ORTHO05D006259 2.6e-16 90.5 352 27.6
CAN.G1191.3 Capsicum annuum HOM05D009485 ORTHO05D006259 7.6e-16 89.0 180 40.0
Nn3g20927 Nelumbo nucifera HOM05D006785 ORTHO05D006259 9.9e-16 88.6 240 34.6
AT1G06530 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 1.7e-15 87.8 220 33.2
Cc05_g09420 Coffea canephora HOM05D009485 ORTHO05D006259 1.7e-15 87.8 187 36.9
Manes.01G127500 Manihot esculenta HOM05D006785 ORTHO05D006259 2.2e-15 87.4 215 34.0
QL08p044083 Quercus lobata HOM05D006785 ORTHO05D006259 2.9e-15 87.0 347 28.2
Eucgr.A01969 Eucalyptus grandis HOM05D006785 ORTHO05D006259 3.8e-15 86.7 337 43.6
Duzib264G0099 Durio zibethinus HOM05D006785 ORTHO05D006259 4.9e-15 86.3 153 44.4
Gorai.008G098200 Gossypium raimondii HOM05D006785 ORTHO05D006259 1.9e-14 84.3 217 32.3
Solyc10g007780.3 Solanum lycopersicum HOM05D009485 ORTHO05D006259 2.4e-14 84.0 126 43.7
Sed0007746 Sechium edule HOM05D006785 ORTHO05D006259 3.2e-14 83.6 335 26.6
Gohir.D12G068400 Gossypium hirsutum HOM05D006785 ORTHO05D006259 9.3e-14 82.0 217 32.7
Carub.0001s0590 Capsella rubella HOM05D006785 ORTHO05D006259 2.1e-13 80.9 231 34.2
Peaxi162Scf00035g00291 Petunia axillaris HOM05D009485 ORTHO05D006259 2.7e-13 80.5 243 32.9
Thecc.01G161700 Theobroma cacao HOM05D006785 ORTHO05D006259 4.6e-13 79.7 210 35.2
Gohir.D04G036800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 6.0e-13 79.3 182 36.3
Oeu036701.1 Olea europaea HOM05D006851 ORTHO05D008844 1.0e-12 78.6 189 32.8
Cfa021376 Carpinus fangiana HOM05D006785 ORTHO05D006259 1.3e-12 78.2 355 26.5
Gohir.A05G378800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.3e-12 78.2 182 35.7
Gorai.012G041600 Gossypium raimondii HOM05D006785 ORTHO05D006259 1.3e-12 78.2 182 36.3
CARHR006150 Cardamine hirsuta HOM05D006785 ORTHO05D006259 1.7e-12 77.8 221 31.7
PGR042G2728 Punica granatum HOM05D006785 ORTHO05D006259 3.0e-12 77.0 347 26.8
Sopen07g029750 Solanum pennellii HOM05D009485 ORTHO05D006259 3.9e-12 76.6 150 39.3
Nitab4.5_0001675g0090 Nicotiana tabacum HOM05D009485 ORTHO05D006259 6.6e-12 75.9 155 38.1
Gohir.A12G079000 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.1e-11 75.1 217 31.8
CANSAT64G1891 Cannabis sativa HOM05D006785 ORTHO05D006259 1.9e-11 74.3 347 25.1
PSO675G6378 Papaver somniferum HOM05D006785 ORTHO05D006259 4.3e-11 73.2 138 40.6
Atru.chr6.2094 Acer truncatum HOM05D006785 ORTHO05D006259 7.3e-11 72.4 333 27.3
MELO3C019688.2 Cucumis melo HOM05D006785 ORTHO05D006259 1.3e-10 71.6 348 24.4
Oeu020927.1 Olea europaea HOM05D009485 ORTHO05D006259 2.1e-10 70.9 185 30.8
MBI10_g42732_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 2.8e-10 70.5 141 37.6
Solyc07g056370.3 Solanum lycopersicum HOM05D009485 ORTHO05D006259 2.8e-10 70.5 129 40.3
unitig_747.g21610 Utricularia gibba HOM05D009485 ORTHO05D006259 2.8e-10 70.5 237 28.3
TPR.G12660 Trifolium pratense HOM05D006785 ORTHO05D006259 3.6e-10 70.1 330 32.4
TAR622G1344 Trochodendron aralioides HOM05D006785 ORTHO05D006259 3.6e-10 70.1 144 38.2
Thhalv10009835m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 4.8e-10 69.7 225 29.3
unitig_46.g18281 Utricularia gibba HOM05D009485 ORTHO05D006259 6.2e-10 69.3 181 32.0
PSO541G2000 Papaver somniferum HOM05D006785 ORTHO05D006259 6.9e-09 65.9 256 29.3
FAN14G2666 Fragaria x ananassa HOM05D006785 ORTHO05D006259 1.2e-08 65.1 345 25.2
TAR629G3165 Trochodendron aralioides HOM05D006785 ORTHO05D006259 2.0e-08 64.3 141 39.7
Cpa.g.sc50.80 Carica papaya HOM05D006785 ORTHO05D006259 2.6e-08 63.9 354 26.3
MD17G1139500 Malus domestica HOM05D006785 ORTHO05D006259 2.6e-08 63.9 264 25.0
Potri.002G060200 Populus trichocarpa HOM05D006785 ORTHO05D006259 2.6e-08 63.9 134 37.3
FAN02G2853 Fragaria x ananassa HOM05D006785 ORTHO05D006259 5.8e-08 62.8 335 24.8
MD09G1151900 Malus domestica HOM05D006785 ORTHO05D006259 9.9e-08 62.0 264 23.9
Potri.005G201400 Populus trichocarpa HOM05D006785 ORTHO05D006259 1.7e-07 61.2 230 28.7
FAN05G2931 Fragaria x ananassa HOM05D006785 ORTHO05D006259 2.2e-07 60.8 335 24.5
Gohir.D11G228900 Gossypium hirsutum HOM05D006785 ORTHO05D006259 2.2e-07 60.8 93 40.9
Thhalv10006112m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 3.8e-07 60.1 120 39.2
Aa31LG10G13400 Aethionema arabicum HOM05D006785 ORTHO05D006259 6.4e-07 59.3 212 31.6
Phvul.008G191300 Phaseolus vulgaris HOM05D006785 ORTHO05D006259 6.4e-07 59.3 229 27.1
Sp4g24990 Schrenkiella parvula HOM05D006785 ORTHO05D006259 6.4e-07 59.3 345 24.1
Aqoxy4G00148 Aquilegia oxysepala HOM05D006785 ORTHO05D006259 8.4e-07 58.9 208 29.8
Haze_13495 Corylus avellana HOM05D006785 ORTHO05D006259 8.4e-07 58.9 355 24.5
Glyma.14G027900 Glycine max HOM05D006785 ORTHO05D006259 1.1e-06 58.5 347 39.5
Nitab4.5_0003934g0050 Nicotiana tabacum HOM05D009485 ORTHO05D006259 1.1e-06 58.5 76 48.7
ATR0568G074 Amborella trichopoda HOM05D006785 ORTHO05D006259 1.4e-06 58.2 203 28.1
arahy.Tifrunner.gnm1.ann1.W4MS3F Arachis hypogaea HOM05D006785 ORTHO05D006259 1.4e-06 58.2 258 24.4
LjContig00310g0014416 Lotus japonicus HOM05D006785 ORTHO05D006259 1.9e-06 57.8 225 28.4
C04p03820 Brassica napus HOM05D006785 ORTHO05D006259 2.4e-06 57.4 138 27.5
BolC4t22018H Brassica oleracea HOM05D006785 ORTHO05D006259 2.4e-06 57.4 138 27.5
Lalb_Chr17g0348301 Lupinus albus HOM05D006785 ORTHO05D006259 2.4e-06 57.4 313 25.6
Duzib147G0591 Durio zibethinus HOM05D006785 ORTHO05D006259 3.2e-06 57.0 137 37.2
FAN09G1973 Fragaria x ananassa HOM05D006785 ORTHO05D006259 5.4e-06 56.2 335 23.9
Aa31LG5G5980 Aethionema arabicum HOM05D006785 ORTHO05D006259 7.1e-06 55.8 130 36.2
CDE07G0721 Ceratophyllum demersum HOM05D050733 ORTHO05D006259 7.1e-06 55.8 103 35.0
BraA05t19307Z Brassica rapa HOM05D006785 ORTHO05D006259 9.3e-06 55.5 136 33.1


User provided reference genes

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