Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 8.3e-191 670.2 345 100.0
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 1.3e-55 221.1 290 46.9
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 3.0e-55 219.9 349 42.4
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 7.3e-54 215.3 289 45.3
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 2.1e-53 213.8 205 56.6
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 2.8e-53 213.4 354 41.8
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 3.6e-53 213.0 286 44.8
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 1.8e-52 210.7 205 56.1
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 3.1e-52 209.9 351 41.6
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 5.2e-52 209.1 205 55.6
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 6.8e-52 208.8 298 44.3
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 8.9e-52 208.4 351 41.9
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 8.9e-52 208.4 337 41.8
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 1.2e-51 208.0 215 53.5
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 1.5e-51 207.6 337 42.1
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 1.5e-51 207.6 199 56.3
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 2.0e-51 207.2 229 49.8
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 2.0e-51 207.2 341 39.3
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 4.4e-51 206.1 171 62.0
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 2.2e-50 203.8 179 57.5
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 2.9e-50 203.4 341 40.2
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 3.8e-50 203.0 171 61.4
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 4.9e-50 202.6 255 47.5
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 8.4e-50 201.8 338 40.5
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 1.4e-49 201.1 305 43.3
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 3.2e-49 199.9 213 51.6
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 4.1e-49 199.5 297 42.4
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 7.1e-49 198.7 295 42.7
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 9.2e-49 198.4 235 48.5
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 1.2e-48 198.0 170 57.6
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 1.2e-48 198.0 283 45.6
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 1.6e-48 197.6 279 43.7
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 4.6e-48 196.1 305 40.3
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 4.6e-48 196.1 354 39.8
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 6.0e-48 195.7 209 50.7
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 6.0e-48 195.7 281 45.2
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 7.8e-48 195.3 234 47.9
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 7.8e-48 195.3 224 49.1
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 1.3e-47 194.5 311 39.9
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 2.3e-47 193.7 280 45.4
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 5.1e-47 192.6 338 41.7
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 6.6e-47 192.2 348 38.8
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 8.6e-47 191.8 281 42.7
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 8.6e-47 191.8 198 53.5
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 8.6e-47 191.8 350 38.9
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 1.1e-46 191.4 278 43.5
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 1.1e-46 191.4 195 52.3
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 1.5e-46 191.0 213 50.2
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 3.3e-46 189.9 198 51.5
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 4.3e-46 189.5 234 46.6
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 4.3e-46 189.5 230 47.0
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 5.6e-46 189.1 308 41.2
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 5.6e-46 189.1 293 43.0
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 9.6e-46 188.3 340 39.7
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 1.6e-45 187.6 197 52.3
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 2.1e-45 187.2 215 48.8
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 2.1e-45 187.2 243 46.1
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 2.1e-45 187.2 280 42.1
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 2.8e-45 186.8 215 48.8
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 2.8e-45 186.8 170 57.1
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 2.8e-45 186.8 167 56.9
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 3.6e-45 186.4 293 42.3
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 4.7e-45 186.0 300 42.0
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 6.2e-45 185.7 239 44.4
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 6.2e-45 185.7 215 48.4
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 8.1e-45 185.3 167 57.5
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 1.1e-44 184.9 193 52.3
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 1.8e-44 184.1 335 37.0
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 2.4e-44 183.7 216 47.7
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 2.4e-44 183.7 181 51.9
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 6.9e-44 182.2 345 37.4
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 1.5e-43 181.0 262 44.3
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 1.5e-43 181.0 347 38.0
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 4.4e-43 179.5 393 34.6
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 4.4e-43 179.5 355 36.9
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 4.4e-43 179.5 209 48.3
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 1.3e-42 177.9 343 37.0
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 1.7e-42 177.6 362 37.3
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 1.7e-42 177.6 218 46.8
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 4.9e-42 176.0 170 54.1
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 4.9e-42 176.0 354 36.2
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 6.4e-42 175.6 243 42.4
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 8.4e-42 175.3 203 48.3
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 2.4e-41 173.7 166 50.0
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 3.2e-41 173.3 167 50.9
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 4.2e-41 172.9 203 47.3
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 1.6e-40 171.0 343 36.7
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 2.1e-40 170.6 356 36.5
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 2.7e-40 170.2 235 43.8
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 1.3e-39 167.9 353 33.4
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 1.9e-38 164.1 179 48.6
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 2.5e-38 163.7 204 46.6
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 4.3e-38 162.9 257 40.9
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 1.6e-37 161.0 173 53.8
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 1.8e-36 157.5 290 38.3
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 4.0e-36 156.4 264 41.3
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 2.2e-34 150.6 117 65.0
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 3.7e-29 133.3 164 48.2
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 3.8e-26 123.2 116 48.3
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 2.7e-24 117.1 173 38.7
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 6.0e-24 115.9 123 43.9
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 5.6e-22 109.4 215 32.6
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 1.9e-17 94.4 251 34.7
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 3.2e-17 93.6 168 30.4
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 5.5e-17 92.8 85 50.6
MCO16G170 Micromonas commoda HOM05D006765 ORTHO05D008554 3.5e-16 90.1 201 30.3
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 8.7e-15 85.5 90 45.6
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 2.4e-12 77.4 87 46.0
Hma1.2p1_1094F.1_g256330 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 3.6e-08 63.5 169 33.1


User provided reference genes

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