Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013156 Daucus carota HOM05D000718 ORTHO05D007431 5.9e-261 903.7 456 100.0
Lj1A829G32 Lonicera japonica HOM05D000718 ORTHO05D007431 9.2e-206 720.3 460 78.7
Rhsim06G0207800 Rhododendron simsii HOM05D000718 ORTHO05D007431 9.6e-203 710.3 456 78.1
Dinv18364 Davidia involucrata HOM05D000718 ORTHO05D007431 1.1e-201 706.8 461 77.4
Solyc07g062450.3 Solanum lycopersicum HOM05D000718 ORTHO05D007431 6.4e-199 697.6 460 76.5
PGSC0003DMG400007071 Solanum tuberosum HOM05D000718 ORTHO05D007431 6.4e-199 697.6 460 76.5
GSVIVG01014199001 Vitis vinifera HOM05D000718 ORTHO05D007431 5.4e-198 694.5 460 76.3
Sopen07g030690 Solanum pennellii HOM05D000718 ORTHO05D007431 1.2e-197 693.3 460 76.1
Nitab4.5_0006953g0050 Nicotiana tabacum HOM05D000718 ORTHO05D007431 2.5e-195 685.6 460 75.0
CAN.G375.14 Capsicum annuum HOM05D000718 ORTHO05D007431 1.6e-194 682.9 460 75.0
Actinidia12577 Actinidia chinensis HOM05D000718 ORTHO05D007431 2.1e-194 682.6 460 74.6
MD03G1243500 Malus domestica HOM05D000718 ORTHO05D007431 1.8e-193 679.5 455 73.0
CANSAT35G0289 Cannabis sativa HOM05D000718 ORTHO05D007431 3.1e-193 678.7 457 73.7
Peaxi162Scf00111g01475 Petunia axillaris HOM05D000718 ORTHO05D007431 4.0e-193 678.3 458 74.0
Atru.chr2.2147 Acer truncatum HOM05D000718 ORTHO05D007431 9.0e-193 677.2 459 74.3
Nitab4.5_0003565g0040 Nicotiana tabacum HOM05D000718 ORTHO05D007431 2.0e-192 676.0 460 74.1
CiPaw.11G160400 Carya illinoinensis HOM05D000718 ORTHO05D007431 3.4e-192 675.2 457 73.3
PGR031G2045 Punica granatum HOM05D000718 ORTHO05D007431 3.8e-191 671.8 459 75.4
Oeu025333.1 Olea europaea HOM05D000718 ORTHO05D007431 2.4e-190 669.1 461 72.7
RcHm_v2.0_Chr5g0030941 Rosa chinensis HOM05D000718 ORTHO05D007431 2.4e-190 669.1 455 72.3
Prupe.4G164800 Prunus persica HOM05D000718 ORTHO05D007431 3.2e-190 668.7 457 71.6
Ah.04g164270 Amaranthus hybridus HOM05D000718 ORTHO05D007431 5.4e-190 667.9 457 72.6
vmacro23465 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 5.4e-190 667.9 476 72.3
Cc05_g11090 Coffea canephora HOM05D000718 ORTHO05D007431 2.7e-189 665.6 460 73.9
THA.LOC104822564 Tarenaya hassleriana HOM05D000718 ORTHO05D007431 1.0e-188 663.7 456 72.1
FvH4_3g18310 Fragaria vesca HOM05D000718 ORTHO05D007431 2.3e-188 662.5 455 71.2
SalBow7G4178 Salvia bowleyana HOM05D000718 ORTHO05D007431 2.3e-188 662.5 465 72.0
SalBow7G4376 Salvia bowleyana HOM05D000718 ORTHO05D007431 6.7e-188 661.0 465 71.8
Eucgr.K01884 Eucalyptus grandis HOM05D000718 ORTHO05D007431 8.7e-188 660.6 453 73.1
Ca_12194_v3 Cicer arietinum L. HOM05D000718 ORTHO05D007431 1.6e-186 656.4 459 69.7
Lj3g0001987 Lotus japonicus HOM05D000718 ORTHO05D007431 2.1e-186 656.0 459 69.9
EL10Ac4g08344 Beta vulgaris HOM05D000718 ORTHO05D007431 3.7e-186 655.2 457 70.7
TPR.G16488 Trifolium pratense HOM05D000718 ORTHO05D007431 4.8e-186 654.8 460 69.3
FAN16G1727 Fragaria x ananassa HOM05D000718 ORTHO05D007431 2.4e-185 652.5 464 69.6
Lsat_1_v5_gn_9_99900 Lactuca sativa HOM05D000718 ORTHO05D007431 2.4e-185 652.5 456 73.2
Haze_09324 Corylus avellana HOM05D000718 ORTHO05D007431 4.0e-185 651.7 474 69.6
FAN25G1161 Fragaria x ananassa HOM05D000718 ORTHO05D007431 4.0e-185 651.7 455 70.3
Migut.H01998 Erythranthe guttata HOM05D000718 ORTHO05D007431 6.9e-185 651.0 466 70.6
Psat0s1037g0040 Pisum sativum HOM05D000718 ORTHO05D007431 1.5e-184 649.8 461 69.8
COL.COLO4_17547 Corchorus olitorius HOM05D000718 ORTHO05D007431 2.0e-184 649.4 475 70.9
Thecc.07G114900 Theobroma cacao HOM05D000718 ORTHO05D007431 2.0e-184 649.4 461 72.5
AUR62042779 Chenopodium quinoa HOM05D000718 ORTHO05D007431 2.6e-184 649.0 471 69.4
TWI39G0589 Tripterygium wilfordii HOM05D000718 ORTHO05D007431 5.8e-184 647.9 456 70.0
Potri.001G390700 Populus trichocarpa HOM05D000718 ORTHO05D007431 9.9e-184 647.1 457 71.6
arahy.Tifrunner.gnm1.ann1.6IHZ0U Arachis hypogaea HOM05D000718 ORTHO05D007431 1.7e-183 646.4 460 69.1
FAN11G0057 Fragaria x ananassa HOM05D000718 ORTHO05D007431 2.9e-183 645.6 455 70.3
CARHR089850 Cardamine hirsuta HOM05D000718 ORTHO05D007431 3.8e-183 645.2 459 71.0
Cfa019567 Carpinus fangiana HOM05D000718 ORTHO05D007431 4.9e-183 644.8 445 71.9
Duzib187G1570 Durio zibethinus HOM05D000718 ORTHO05D007431 4.9e-183 644.8 461 71.6
HanXRQChr15g0476211 Helianthus annuus HOM05D000718 ORTHO05D007431 7.1e-182 641.0 458 70.7
Hund02254 Selenicereus undatus HOM05D000718 ORTHO05D007431 9.3e-182 640.6 456 70.2
ECA240G1747 Erigeron canadensis HOM05D000718 ORTHO05D007431 1.2e-181 640.2 457 70.5
arahy.Tifrunner.gnm1.ann1.STN4DM Arachis hypogaea HOM05D000718 ORTHO05D007431 1.6e-181 639.8 456 69.3
AL3G27230 Arabidopsis lyrata HOM05D000718 ORTHO05D007431 6.0e-181 637.9 458 69.7
ClCG11G017460 Citrullus lanatus HOM05D000718 ORTHO05D007431 6.0e-181 637.9 455 69.9
Sed0007644 Sechium edule HOM05D000718 ORTHO05D007431 6.0e-181 637.9 458 68.8
SGA_v2.0_scaffold130G34293 Striga asiatica HOM05D000718 ORTHO05D007431 7.9e-181 637.5 455 71.6
MELO3C025639.2 Cucumis melo HOM05D000718 ORTHO05D007431 1.3e-180 636.7 458 69.9
Gohir.A01G054400 Gossypium hirsutum HOM05D000718 ORTHO05D007431 1.8e-180 636.3 461 71.4
QL08p026242 Quercus lobata HOM05D000718 ORTHO05D007431 1.8e-180 636.3 471 69.2
Gorai.002G054700 Gossypium raimondii HOM05D000718 ORTHO05D007431 3.9e-180 635.2 461 70.9
AT3G14910 Arabidopsis thaliana HOM05D000718 ORTHO05D007431 6.7e-180 634.4 458 69.7
Carub.0003s1457 Capsella rubella HOM05D000718 ORTHO05D007431 1.1e-179 633.6 458 69.0
Gohir.D01G042724 Gossypium hirsutum HOM05D000718 ORTHO05D007431 1.1e-179 633.6 461 70.7
BolC5t33913H Brassica oleracea HOM05D000718 ORTHO05D007431 1.9e-179 632.9 459 70.6
Thhalv10020708m.g Eutrema salsugineum HOM05D000718 ORTHO05D007431 4.3e-179 631.7 458 69.9
Medtr8g464030 Medicago truncatula HOM05D000718 ORTHO05D007431 2.1e-178 629.4 499 63.9
Glyma.06G228900 Glycine max HOM05D000718 ORTHO05D007431 3.7e-178 628.6 460 67.6
A05p34500 Brassica napus HOM05D000718 ORTHO05D007431 4.8e-178 628.2 453 70.6
BraA05t22270Z Brassica rapa HOM05D000718 ORTHO05D007431 4.8e-178 628.2 453 70.6
Lalb_Chr01g0006831 Lupinus albus HOM05D000718 ORTHO05D007431 1.8e-177 626.3 455 67.5
Glyma.12G157600 Glycine max HOM05D000718 ORTHO05D007431 5.3e-177 624.8 459 67.1
BcaB06g25332 Brassica carinata HOM05D000718 ORTHO05D007431 2.6e-176 622.5 449 70.6
Nn1g04439 Nelumbo nucifera HOM05D000718 ORTHO05D007431 4.5e-176 621.7 427 73.3
CSS0021542 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 5.8e-176 621.3 462 69.5
Aa31LG8G2120 Aethionema arabicum HOM05D000718 ORTHO05D007431 7.6e-176 620.9 452 69.2
PSO782G3001 Papaver somniferum HOM05D000718 ORTHO05D007431 3.2e-174 615.5 463 67.2
PSO478G1672 Papaver somniferum HOM05D000718 ORTHO05D007431 2.7e-173 612.5 463 66.7
Aqoxy4G00321 Aquilegia oxysepala HOM05D000718 ORTHO05D007431 3.5e-173 612.1 468 67.1
Lalb_Chr03g0031171 Lupinus albus HOM05D000718 ORTHO05D007431 5.1e-172 608.2 455 65.9
Phvul.011G162200 Phaseolus vulgaris HOM05D000718 ORTHO05D007431 5.1e-172 608.2 462 65.4
MBI07_g09566_MAGBIO Magnolia biondii HOM05D000718 ORTHO05D007431 1.8e-169 599.7 503 61.2
C05p52240 Brassica napus HOM05D000718 ORTHO05D007431 9.0e-169 597.4 434 70.3
Nn1g09174 Nelumbo nucifera HOM05D000718 ORTHO05D007431 7.6e-168 594.3 460 66.3
Manes.03G101200 Manihot esculenta HOM05D000718 ORTHO05D007431 3.2e-166 589.0 397 72.8
CSS0043856 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 5.1e-164 581.6 458 66.2
FAN21G3716 Fragaria x ananassa HOM05D000718 ORTHO05D007431 7.4e-163 577.8 396 71.5
ATR0602G196 Amborella trichopoda HOM05D000718 ORTHO05D007431 3.4e-160 568.9 451 64.1
vmacro11939 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.3e-159 567.0 476 64.5
CDE04G1093 Ceratophyllum demersum HOM05D000718 ORTHO05D007431 2.5e-158 562.8 450 62.4
CSS0014195 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 4.6e-157 558.5 460 63.9
AUR62019575 Chenopodium quinoa HOM05D000718 ORTHO05D007431 1.4e-156 557.0 425 66.1
VMungo1127G0879 Vigna mungo HOM05D000718 ORTHO05D007431 1.5e-152 543.5 410 65.6
unitig_52.g17395 Utricularia gibba HOM05D000718 ORTHO05D007431 5.3e-145 518.5 465 59.1
Os09g0315800 Oryza sativa ssp. japonica HOM05D000718 ORTHO05D007431 2.5e-142 509.6 470 57.4
HPP92_023429 Vanilla planifolia HOM05D000718 ORTHO05D007431 3.2e-142 509.2 464 58.6
SEGI_16322 Sequoiadendron giganteum HOM05D000718 ORTHO05D007431 9.4e-134 481.1 447 53.5
Ciclev10021305m.g Citrus clementina HOM05D000718 ORTHO05D007431 5.2e-132 475.3 311 77.8
Zm00001eb309730 Zea mays HOM05D000718 ORTHO05D007431 9.5e-126 454.5 338 65.7
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 2.6e-123 446.4 424 57.8
MD11G1263600 Malus domestica HOM05D000718 ORTHO05D007431 4.3e-118 429.1 281 74.0
Sc16g0007570 Simmondsia chinensis HOM05D000718 ORTHO05D007431 2.2e-114 416.8 299 71.9
CsaV3_4G033110 Cucumis sativus L. HOM05D000718 ORTHO05D007431 1.6e-109 400.6 298 65.8
vmacro11937 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 2.7e-104 383.3 337 63.2
vmacro23384 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 6.8e-100 368.6 348 59.5
SHI27609 Sapria himalayana HOM05D000718 ORTHO05D007431 2.6e-99 366.7 404 48.5
AagrBONN_evm.TU.Sc2ySwM_228.1801 Anthoceros agrestis HOM05D000718 ORTHO05D007431 8.6e-95 351.7 462 44.4
SMO367G0522 Selaginella moellendorffii HOM05D000718 ORTHO05D007431 7.1e-89 332.0 453 44.6
BcaB06g29518 Brassica carinata HOM05D000718 ORTHO05D002712 1.9e-86 323.9 454 46.0
Pp3c4_25540 Physcomitrium patens HOM05D000718 ORTHO05D007431 7.3e-86 322.0 463 38.2
Thecc.07G114700 Theobroma cacao HOM05D000718 ORTHO05D007431 1.1e-84 318.2 378 49.2
Mapoly0061s0004 Marchantia polymorpha HOM05D000718 ORTHO05D007431 3.8e-82 309.7 454 41.0
Sp3g13120 Schrenkiella parvula HOM05D000718 ORTHO05D007431 9.3e-81 305.1 224 63.4
vmacro11938 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 3.6e-77 293.1 302 56.0
MSTRG.14233 Avicennia marina HOM05D000718 ORTHO05D007431 4.9e-74 282.7 233 60.5
Psat4g090840 Pisum sativum HOM05D000718 ORTHO05D007431 1.6e-72 277.7 270 58.9
Psat3g077000 Pisum sativum HOM05D000718 ORTHO05D007431 4.3e-70 269.6 253 53.0
Sc16g0007580 Simmondsia chinensis HOM05D000718 ORTHO05D007431 1.7e-58 231.1 163 63.8
Thecc.07G115900 Theobroma cacao HOM05D000718 ORTHO05D007431 6.5e-50 202.6 164 62.2
Hund02252 Selenicereus undatus HOM05D000718 ORTHO05D007431 7.7e-43 179.1 161 62.1
PGSC0003DMG400011947 Solanum tuberosum HOM05D000718 ORTHO05D007431 1.7e-42 177.9 119 75.6
TAR627G0847 Trochodendron aralioides HOM05D000718 ORTHO05D007431 3.7e-37 160.2 127 66.1
MD11G1263700 Malus domestica HOM05D000718 ORTHO05D007431 4.8e-37 159.8 121 60.3
Cpa.g.sc77.7 Carica papaya HOM05D000718 ORTHO05D007431 2.9e-34 150.6 117 63.2
Thecc.07G115200 Theobroma cacao HOM05D000718 ORTHO05D007431 5.5e-33 146.4 126 57.9
Psat2g113040 Pisum sativum HOM05D000718 ORTHO05D004709 2.5e-25 120.9 102 62.7
CBR_g49411 Chara braunii HOM05D000019 ORTHO05D000353 5.5e-25 119.8 411 27.0
CAN.G713.20 Capsicum annuum HOM05D000718 ORTHO05D007431 3.7e-21 107.1 109 54.1
Thecc.07G114100 Theobroma cacao HOM05D000718 ORTHO05D007431 9.8e-14 82.4 52 78.8
Thecc.07G113800 Theobroma cacao HOM05D000718 ORTHO05D007431 6.3e-13 79.7 58 69.0
Thecc.07G114000 Theobroma cacao HOM05D000718 ORTHO05D007431 8.3e-13 79.3 96 44.8
Lsat_1_v5_gn_9_99920 Lactuca sativa HOM05D000718 ORTHO05D007431 1.6e-08 65.1 54 66.7


User provided reference genes

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