Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013148 Daucus carota HOM05D004677 ORTHO05D005746 2.7e-145 518.8 297 100.0
DCAR_019755 Daucus carota HOM05D004677 ORTHO05D005746 6.3e-30 135.6 77 84.4
vmacro12188 Vaccinium macrocarpon HOM05D004677 ORTHO05D005746 5.5e-26 122.5 77 76.6
COL.COLO4_20015 Corchorus olitorius HOM05D004677 ORTHO05D005746 1.2e-25 121.3 100 64.0
Aa31LG5G4780 Aethionema arabicum HOM05D004677 ORTHO05D005746 2.8e-25 120.2 105 60.0
Cfa014357 Carpinus fangiana HOM05D004677 ORTHO05D005746 2.8e-25 120.2 87 70.1
Nitab4.5_0000006g0310 Nicotiana tabacum HOM05D004677 ORTHO05D005746 2.8e-25 120.2 81 72.8
CiPaw.03G158200 Carya illinoinensis HOM05D004677 ORTHO05D005746 3.6e-25 119.8 79 73.4
Gohir.D07G176800 Gossypium hirsutum HOM05D004677 ORTHO05D005746 3.6e-25 119.8 81 71.6
Gorai.001G197600 Gossypium raimondii HOM05D004677 ORTHO05D005746 3.6e-25 119.8 81 71.6
Glyma.12G192200 Glycine max HOM05D004677 ORTHO05D005746 4.7e-25 119.4 78 73.1
TPR.G4610 Trifolium pratense HOM05D004677 ORTHO05D005746 4.7e-25 119.4 109 63.3
Actinidia09726 Actinidia chinensis HOM05D004677 ORTHO05D005746 6.1e-25 119.0 95 64.2
Duzib133G0523 Durio zibethinus HOM05D004677 ORTHO05D005746 6.1e-25 119.0 79 73.4
Gohir.A07G174750 Gossypium hirsutum HOM05D004677 ORTHO05D005746 8.0e-25 118.6 101 60.4
Potri.014G155200 Populus trichocarpa HOM05D004677 ORTHO05D005746 8.0e-25 118.6 76 75.0
AT2G32520 Arabidopsis thaliana HOM05D004677 ORTHO05D005746 1.0e-24 118.2 97 58.8
Glyma.06G307800 Glycine max HOM05D004677 ORTHO05D005746 1.0e-24 118.2 98 65.3
Rhsim06G0164500 Rhododendron simsii HOM05D004677 ORTHO05D005746 1.0e-24 118.2 74 75.7
Sabra14G0117500 Salix brachista HOM05D004677 ORTHO05D005746 1.0e-24 118.2 101 59.4
Cpa.g.sc572.2 Carica papaya HOM05D004677 ORTHO05D005746 1.4e-24 117.9 106 58.5
Lalb_Chr01g0023241 Lupinus albus HOM05D004677 ORTHO05D005746 1.4e-24 117.9 76 72.4
QL08p032142 Quercus lobata HOM05D004677 ORTHO05D005746 1.4e-24 117.9 96 65.6
TAR629G2143 Trochodendron aralioides HOM05D004677 ORTHO05D005746 1.4e-24 117.9 95 61.1
VMungo1080G1602 Vigna mungo HOM05D004677 ORTHO05D005746 1.4e-24 117.9 76 72.4
CSS0008737 Camellia sinensis var. sinensis HOM05D004677 ORTHO05D005746 1.8e-24 117.5 100 61.0
Cc05_g03990 Coffea canephora HOM05D004677 ORTHO05D005746 1.8e-24 117.5 107 60.7
Dinv08753 Davidia involucrata HOM05D004677 ORTHO05D005746 1.8e-24 117.5 76 75.0
Prupe.3G214600 Prunus persica HOM05D004677 ORTHO05D005746 1.8e-24 117.5 104 61.5
AL4G27910 Arabidopsis lyrata HOM05D004677 ORTHO05D005746 2.3e-24 117.1 97 58.8
Lj3g0012150 Lotus japonicus HOM05D004677 ORTHO05D005746 2.3e-24 117.1 76 73.7
Sed0004392 Sechium edule HOM05D004677 ORTHO05D005746 2.3e-24 117.1 85 67.1
Zm00001eb162930 Zea mays HOM05D004677 ORTHO05D005746 2.3e-24 117.1 84 71.4
Ciclev10016206m.g Citrus clementina HOM05D004677 ORTHO05D005746 3.0e-24 116.7 108 60.2
Lsat_1_v5_gn_9_106900 Lactuca sativa HOM05D004677 ORTHO05D005746 3.0e-24 116.7 105 58.1
Nitab4.5_0004702g0010 Nicotiana tabacum HOM05D004677 ORTHO05D005746 3.0e-24 116.7 95 61.1
Thecc.01G176700 Theobroma cacao HOM05D004677 ORTHO05D005746 3.0e-24 116.7 100 62.0
TWI18G0105 Tripterygium wilfordii HOM05D004677 ORTHO05D005746 3.0e-24 116.7 94 66.0
Migut.M00416 Erythranthe guttata HOM05D004677 ORTHO05D005746 4.0e-24 116.3 80 70.0
Ca_19496_v3 Cicer arietinum L. HOM05D004677 ORTHO05D005746 5.2e-24 115.9 99 64.6
Hma1.2p1_0895F.1_g233790 Hydrangea macrophylla HOM05D004677 ORTHO05D005746 5.2e-24 115.9 89 66.3
Lj3g0003247 Lotus japonicus HOM05D004677 ORTHO05D005746 5.2e-24 115.9 77 70.1
Lalb_Chr01g0005771 Lupinus albus HOM05D004677 ORTHO05D005746 5.2e-24 115.9 82 72.0
Manes.13G068200 Manihot esculenta HOM05D004677 ORTHO05D005746 5.2e-24 115.9 76 73.7
Medtr4g049830 Medicago truncatula HOM05D004677 ORTHO05D005746 5.2e-24 115.9 118 56.8
Phvul.005G116100 Phaseolus vulgaris HOM05D004677 ORTHO05D005746 5.2e-24 115.9 75 72.0
RcHm_v2.0_Chr2g0158791 Rosa chinensis HOM05D004677 ORTHO05D005746 5.2e-24 115.9 97 63.9
Sc12g0002230 Simmondsia chinensis HOM05D004677 ORTHO05D005746 5.2e-24 115.9 79 69.6
CsaV3_7G003450 Cucumis sativus L. HOM05D004677 ORTHO05D005746 6.8e-24 115.5 106 57.5
MBI10_g41369_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 6.8e-24 115.5 85 68.2
MBI10_g43118_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 6.8e-24 115.5 85 68.2
Os01g0531500 Oryza sativa ssp. japonica HOM05D004677 ORTHO05D005746 6.8e-24 115.5 80 73.8
Solyc05g043430.4 Solanum lycopersicum HOM05D004677 ORTHO05D005746 6.8e-24 115.5 81 70.4
Sopen05g026690 Solanum pennellii HOM05D004677 ORTHO05D005746 6.8e-24 115.5 81 70.4
Oeu036746.3 Olea europaea HOM05D004677 ORTHO05D005746 8.9e-24 115.2 82 68.3
Peaxi162Scf00462g00089 Petunia axillaris HOM05D004677 ORTHO05D005746 8.9e-24 115.2 95 61.1
BolC4t27678H Brassica oleracea HOM05D004677 ORTHO05D005746 1.2e-23 114.8 85 64.7
BraA04t18010Z Brassica rapa HOM05D004677 ORTHO05D005746 1.2e-23 114.8 85 64.7
arahy.Tifrunner.gnm1.ann1.34K6GT Arachis hypogaea HOM05D004677 ORTHO05D005746 1.5e-23 114.4 91 65.9
BcaC02g07915 Brassica carinata HOM05D004677 ORTHO05D005746 1.5e-23 114.4 85 63.5
BcaC02g11313 Brassica carinata HOM05D004677 ORTHO05D005746 1.5e-23 114.4 85 64.7
C04p17150 Brassica napus HOM05D004677 ORTHO05D005746 1.5e-23 114.4 85 64.7
C04p62010 Brassica napus HOM05D004677 ORTHO05D005746 1.5e-23 114.4 85 63.5
BolC4t23265H Brassica oleracea HOM05D004677 ORTHO05D005746 1.5e-23 114.4 85 64.7
FvH4_6g42850 Fragaria vesca HOM05D004677 ORTHO05D005746 2.0e-23 114.0 81 69.1
FAN02G0422 Fragaria x ananassa HOM05D004677 ORTHO05D005746 2.0e-23 114.0 81 69.1
FAN05G4912 Fragaria x ananassa HOM05D004677 ORTHO05D005746 2.0e-23 114.0 81 69.1
Atru.chr6.3221 Acer truncatum HOM05D004677 ORTHO05D005746 2.6e-23 113.6 88 64.8
Carub.0004s1386 Capsella rubella HOM05D004677 ORTHO05D005746 2.6e-23 113.6 97 56.7
CANSAT64G2258 Cannabis sativa HOM05D004677 ORTHO05D005746 3.4e-23 113.2 95 63.2
PSO675G6993 Papaver somniferum HOM05D004677 ORTHO05D005746 3.4e-23 113.2 72 75.0
Psat7g201040 Pisum sativum HOM05D004677 ORTHO05D005746 3.4e-23 113.2 99 63.6
SGA_v2.0_scaffold34G13862 Striga asiatica HOM05D004677 ORTHO05D005746 3.4e-23 113.2 80 67.5
Thhalv10017055m.g Eutrema salsugineum HOM05D004677 ORTHO05D005746 4.4e-23 112.8 85 63.5
MBI10_g35587_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 4.4e-23 112.8 76 71.1
Oeu027244.1 Olea europaea HOM05D004677 ORTHO05D005746 4.4e-23 112.8 78 69.2
Phvul.011G101800 Phaseolus vulgaris HOM05D004677 ORTHO05D005746 4.4e-23 112.8 92 66.3
Hund06461 Selenicereus undatus HOM05D004677 ORTHO05D005746 4.4e-23 112.8 77 70.1
BraA05t20266Z Brassica rapa HOM05D004677 ORTHO05D005746 5.7e-23 112.5 85 63.5
AUR62027103 Chenopodium quinoa HOM05D004677 ORTHO05D005746 5.7e-23 112.5 79 67.1
VMungo1127G1216 Vigna mungo HOM05D004677 ORTHO05D005746 5.7e-23 112.5 81 71.6
FAN09G3259 Fragaria x ananassa HOM05D004677 ORTHO05D005746 7.5e-23 112.1 81 66.7
HanXRQChr03g0073261 Helianthus annuus HOM05D004677 ORTHO05D005746 7.5e-23 112.1 79 69.6
PGR142G1137 Punica granatum HOM05D004677 ORTHO05D005746 7.5e-23 112.1 107 55.1
Aqoxy1G03069 Aquilegia oxysepala HOM05D004677 ORTHO05D005746 1.3e-22 111.3 76 71.1
arahy.Tifrunner.gnm1.ann1.5LK61T Arachis hypogaea HOM05D004677 ORTHO05D005746 1.3e-22 111.3 91 64.8
A05p13260 Brassica napus HOM05D004677 ORTHO05D005746 1.3e-22 111.3 85 63.5
FAN14G2731 Fragaria x ananassa HOM05D004677 ORTHO05D005746 1.3e-22 111.3 81 66.7
Sp4g14870 Schrenkiella parvula HOM05D004677 ORTHO05D005746 1.3e-22 111.3 77 68.8
MSTRG.14847 Avicennia marina HOM05D004677 ORTHO05D005746 1.7e-22 110.9 80 66.2
TWI36G1343 Tripterygium wilfordii HOM05D004677 ORTHO05D005746 1.7e-22 110.9 76 68.4
A04p24990 Brassica napus HOM05D004677 ORTHO05D005746 2.2e-22 110.5 77 67.5
CARHR126350 Cardamine hirsuta HOM05D004677 ORTHO05D005746 2.2e-22 110.5 77 67.5
AUR62012879 Chenopodium quinoa HOM05D004677 ORTHO05D005746 2.2e-22 110.5 79 67.1
ClCG02G002040 Citrullus lanatus HOM05D004677 ORTHO05D005746 2.2e-22 110.5 75 69.3
EL10Ac9g22065 Beta vulgaris HOM05D004677 ORTHO05D005746 2.8e-22 110.2 79 65.8
BcaB06g28600 Brassica carinata HOM05D004677 ORTHO05D005746 2.8e-22 110.2 77 66.2
MELO3C018827.2 Cucumis melo HOM05D004677 ORTHO05D005746 3.7e-22 109.8 82 67.1
THA.LOC104800998 Tarenaya hassleriana HOM05D004677 ORTHO05D005746 3.7e-22 109.8 105 56.2
BcaB02g10464 Brassica carinata HOM05D004677 ORTHO05D005746 4.9e-22 109.4 77 67.5
MBI10_g41368_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 4.9e-22 109.4 76 68.4
CDE08G0164 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 8.3e-22 108.6 77 66.2
CDE02G1429 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 1.1e-21 108.2 77 66.2
Eucgr.K00785 Eucalyptus grandis HOM05D004677 ORTHO05D005746 1.1e-21 108.2 75 68.0
HPP92_020158 Vanilla planifolia HOM05D004677 ORTHO05D005746 1.1e-21 108.2 84 63.1
ATR0585G016 Amborella trichopoda HOM05D004677 ORTHO05D005746 1.4e-21 107.8 82 65.9
SEGI_04984 Sequoiadendron giganteum HOM05D004677 ORTHO05D005746 1.4e-21 107.8 84 64.3
Nn1g03456 Nelumbo nucifera HOM05D004677 ORTHO05D005746 1.8e-21 107.5 85 61.2
Hund00385 Selenicereus undatus HOM05D004677 ORTHO05D005746 1.8e-21 107.5 79 67.1
SGA_v2.0_scaffold445G51724 Striga asiatica HOM05D004677 ORTHO05D005746 3.2e-21 106.7 88 59.1
Sed0023389 Sechium edule HOM05D004677 ORTHO05D005746 7.0e-21 105.5 78 65.4
Lsat_1_v5_gn_9_106880 Lactuca sativa HOM05D004677 ORTHO05D005746 2.7e-20 103.6 77 63.6
HanXRQChr15g0490311 Helianthus annuus HOM05D004677 ORTHO05D005746 2.9e-19 100.1 77 64.9
MD17G1099200 Malus domestica HOM05D004677 ORTHO05D005746 2.9e-19 100.1 80 56.2
SHI10364 Sapria himalayana HOM05D004677 ORTHO05D005746 2.9e-19 100.1 83 59.0
SGA_v2.0_scaffold186G40184 Striga asiatica HOM05D004677 ORTHO05D005746 2.9e-19 100.1 108 50.0
ECA240G0706 Erigeron canadensis HOM05D004677 ORTHO05D005746 1.9e-18 97.4 73 64.4
SMO351G0384 Selaginella moellendorffii HOM05D004677 ORTHO05D005746 1.9e-18 97.4 80 61.2
Lj1A770G43 Lonicera japonica HOM05D004677 ORTHO05D005746 2.5e-18 97.1 59 79.7
Haze_12810 Corylus avellana HOM05D004677 ORTHO05D005746 3.3e-18 96.7 67 74.6
HPP92_020157 Vanilla planifolia HOM05D004677 ORTHO05D005746 9.5e-18 95.1 71 63.4
Pp3c16_5740 Physcomitrium patens HOM05D004677 ORTHO05D005746 3.1e-16 90.1 74 62.2
arahy.Tifrunner.gnm1.ann1.4D0QE2 Arachis hypogaea HOM05D004677 ORTHO05D005746 6.8e-16 89.0 81 55.6
Nn3g18971 Nelumbo nucifera HOM05D004677 ORTHO05D005746 2.6e-15 87.0 61 62.3
Lj5g0020236 Lotus japonicus HOM05D004677 ORTHO05D005746 3.7e-14 83.2 84 52.4
Mapoly0043s0053 Marchantia polymorpha HOM05D004677 ORTHO05D005746 4.9e-14 82.8 83 56.6
SGA_v2.0_scaffold228G43250 Striga asiatica HOM05D004677 ORTHO05D005746 6.4e-14 82.4 59 66.1
AagrBONN_evm.TU.Sc2ySwM_117.68 Anthoceros agrestis HOM05D004677 ORTHO05D005746 3.2e-13 80.1 74 52.7
MD09G1072400 Malus domestica HOM05D004677 ORTHO05D005746 2.7e-12 77.0 54 68.5
Lj2g0012873 Lotus japonicus HOM05D004677 ORTHO05D005746 6.0e-12 75.9 99 40.4
CBR_g23740 Chara braunii HOM05D004677 ORTHO05D005746 1.7e-11 74.3 74 51.4
FAN09G2974 Fragaria x ananassa HOM05D004677 ORTHO05D005746 6.2e-09 65.9 44 65.9
arahy.Tifrunner.gnm1.ann1.65RE86 Arachis hypogaea HOM05D004677 ORTHO05D005746 5.2e-08 62.8 42 69.0
arahy.Tifrunner.gnm1.ann1.IJK42W Arachis hypogaea HOM05D004677 ORTHO05D005746 8.9e-08 62.0 42 69.0
Lj2g0026590 Lotus japonicus HOM05D004677 ORTHO05D005746 9.8e-07 58.5 64 43.8
arahy.Tifrunner.gnm1.ann1.LRB7BH Arachis hypogaea HOM05D004677 ORTHO05D005746 1.7e-06 57.8 69 44.9


User provided reference genes

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