Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013111 Daucus carota HOM05D003240 ORTHO05D009426 5.0e-47 191.4 115 100.0
DCAR_017136 Daucus carota HOM05D003240 ORTHO05D009426 4.4e-35 151.8 116 67.2
FvH4_3g19820 Fragaria vesca HOM05D003240 ORTHO05D009426 5.4e-25 118.2 79 67.1
FAN25G3490 Fragaria x ananassa HOM05D003240 ORTHO05D009426 5.4e-25 118.2 79 67.1
Dinv14922 Davidia involucrata HOM05D003240 ORTHO05D009426 2.7e-24 115.9 78 70.5
FAN16G0971 Fragaria x ananassa HOM05D003240 ORTHO05D009426 3.5e-24 115.5 79 65.8
Eucgr.F01147 Eucalyptus grandis HOM05D003240 ORTHO05D009426 4.6e-24 115.2 73 75.3
FAN21G1097 Fragaria x ananassa HOM05D003240 ORTHO05D009426 4.6e-24 115.2 79 65.8
TWI38G1889 Tripterygium wilfordii HOM05D003240 ORTHO05D009426 7.8e-24 114.4 78 65.4
Manes.15G087500 Manihot esculenta HOM05D003240 ORTHO05D009426 1.0e-23 114.0 78 66.7
Oeu019313.1 Olea europaea HOM05D003240 ORTHO05D009426 1.3e-23 113.6 79 65.8
Potri.001G399200 Populus trichocarpa HOM05D003240 ORTHO05D009426 1.7e-23 113.2 114 53.5
Cc05_g11970 Coffea canephora HOM05D003240 ORTHO05D009426 2.3e-23 112.8 74 70.3
PGR083G0779 Punica granatum HOM05D003240 ORTHO05D009426 2.3e-23 112.8 80 67.5
Potri.011G118600 Populus trichocarpa HOM05D003240 ORTHO05D009426 3.0e-23 112.5 110 57.3
Haze_09433 Corylus avellana HOM05D003240 ORTHO05D009426 5.0e-23 111.7 113 52.2
Cpa.g.sc80.73 Carica papaya HOM05D003240 ORTHO05D009426 1.1e-22 110.5 79 63.3
Hma1.2p1_0458F.1_g157060 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 1.1e-22 110.5 112 54.5
Hma1.2p1_0458F.1_g157080 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 1.1e-22 110.5 117 54.7
Haze_09435 Corylus avellana HOM05D003240 ORTHO05D009426 1.5e-22 110.2 113 52.2
RcHm_v2.0_Chr5g0033251 Rosa chinensis HOM05D003240 ORTHO05D009426 1.9e-22 109.8 114 53.5
Sabra16G0261800 Salix brachista HOM05D003240 ORTHO05D009426 2.5e-22 109.4 109 56.0
Nn1g06519 Nelumbo nucifera HOM05D003240 ORTHO05D009426 3.3e-22 109.0 78 62.8
CiPaw.12G118800 Carya illinoinensis HOM05D003240 ORTHO05D009426 9.5e-22 107.5 83 63.9
Nitab4.5_0001336g0090 Nicotiana tabacum HOM05D003240 ORTHO05D009426 1.2e-21 107.1 79 60.8
Atru.chr2.2486 Acer truncatum HOM05D003240 ORTHO05D009426 2.8e-21 105.9 78 66.7
MD03G1228400 Malus domestica HOM05D003240 ORTHO05D009426 2.8e-21 105.9 114 50.0
Thecc.07G091300 Theobroma cacao HOM05D003240 ORTHO05D009426 2.8e-21 105.9 84 63.1
Hma1.2p1_0898F.1_g234470 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 4.7e-21 105.1 110 56.4
Hma1.2p1_0458F.1_g157090 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 6.2e-21 104.8 80 66.2
Prupe.4G180300 Prunus persica HOM05D003240 ORTHO05D009426 6.2e-21 104.8 109 51.4
CANSAT56G1752 Cannabis sativa HOM05D003240 ORTHO05D009426 8.1e-21 104.4 85 62.4
Ciclev10010456m.g Citrus clementina HOM05D003240 ORTHO05D009426 8.1e-21 104.4 77 62.3
Migut.M00801 Erythranthe guttata HOM05D003240 ORTHO05D009426 1.1e-20 104.0 88 63.6
Cfa020576 Carpinus fangiana HOM05D003240 ORTHO05D009426 1.8e-20 103.2 106 52.8
Prupe.4G180400 Prunus persica HOM05D003240 ORTHO05D009426 1.8e-20 103.2 74 66.2
Gohir.A04G031760 Gossypium hirsutum HOM05D003240 ORTHO05D009426 4.0e-20 102.1 85 60.0
Gohir.A04G031920 Gossypium hirsutum HOM05D003240 ORTHO05D009426 4.0e-20 102.1 85 60.0
Gohir.D05G352600 Gossypium hirsutum HOM05D003240 ORTHO05D009426 4.0e-20 102.1 85 60.0
Gohir.D05G352700 Gossypium hirsutum HOM05D003240 ORTHO05D009426 4.0e-20 102.1 85 60.0
Gorai.009G384900 Gossypium raimondii HOM05D003240 ORTHO05D009426 4.0e-20 102.1 85 60.0
Gorai.009G385100 Gossypium raimondii HOM05D003240 ORTHO05D009426 4.0e-20 102.1 85 60.0
Lj3g0021284 Lotus japonicus HOM05D003240 ORTHO05D009426 4.0e-20 102.1 78 60.3
Nitab4.5_0001241g0070 Nicotiana tabacum HOM05D003240 ORTHO05D009426 6.8e-20 101.3 79 59.5
Duzib213G1023 Durio zibethinus HOM05D003240 ORTHO05D009426 8.9e-20 100.9 85 60.0
Gorai.009G384700 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.2e-19 100.5 85 58.8
CAN.G162.53 Capsicum annuum HOM05D003240 ORTHO05D009426 2.6e-19 99.4 78 57.7
SGA_v2.0_scaffold73G24260 Striga asiatica HOM05D003240 ORTHO05D009426 5.8e-19 98.2 68 70.6
Glyma.12G225100 Glycine max HOM05D003240 ORTHO05D009426 7.5e-19 97.8 79 57.0
Cfa020578 Carpinus fangiana HOM05D003240 ORTHO05D009426 9.8e-19 97.4 103 50.5
Nn4g25258 Nelumbo nucifera HOM05D003240 ORTHO05D009426 9.8e-19 97.4 78 57.7
Sabra11G0103500 Salix brachista HOM05D003240 ORTHO05D009426 9.8e-19 97.4 118 47.5
VMungo1080G0324 Vigna mungo HOM05D003240 ORTHO05D009426 9.8e-19 97.4 79 58.2
MBI07_g30192_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 2.2e-18 96.3 80 58.8
CARHR043350 Cardamine hirsuta HOM05D003240 ORTHO05D009426 3.7e-18 95.5 84 54.8
Gohir.D05G352500 Gossypium hirsutum HOM05D003240 ORTHO05D009426 3.7e-18 95.5 85 55.3
Gorai.009G384600 Gossypium raimondii HOM05D003240 ORTHO05D009426 3.7e-18 95.5 85 55.3
Gohir.A04G032100 Gossypium hirsutum HOM05D003240 ORTHO05D009426 4.9e-18 95.1 85 55.3
Gorai.009G385000 Gossypium raimondii HOM05D003240 ORTHO05D009426 4.9e-18 95.1 74 60.8
MBI06_g23076_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 6.4e-18 94.7 80 58.8
Gohir.A04G032000 Gossypium hirsutum HOM05D003240 ORTHO05D009426 8.3e-18 94.4 85 55.3
Lj3g0010365 Lotus japonicus HOM05D003240 ORTHO05D009426 8.3e-18 94.4 78 57.7
Sopen07g031280 Solanum pennellii HOM05D003240 ORTHO05D009426 8.3e-18 94.4 79 57.0
TPR.G38961 Trifolium pratense HOM05D003240 ORTHO05D009426 8.3e-18 94.4 70 60.0
Thhalv10012399m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 1.1e-17 94.0 67 62.7
Phvul.005G072700 Phaseolus vulgaris HOM05D003240 ORTHO05D009426 1.1e-17 94.0 79 57.0
AT1G53130 Arabidopsis thaliana HOM05D003240 ORTHO05D009426 1.4e-17 93.6 84 54.8
CSS0038111 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 1.4e-17 93.6 108 52.8
PGSC0003DMG400012465 Solanum tuberosum HOM05D003240 ORTHO05D009426 1.4e-17 93.6 80 57.5
BcaB07g33356 Brassica carinata HOM05D003240 ORTHO05D009426 1.9e-17 93.2 84 56.0
CSS0044584 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 1.9e-17 93.2 108 52.8
Carub.0001s4229 Capsella rubella HOM05D003240 ORTHO05D009426 2.4e-17 92.8 67 61.2
AL1G61490 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 3.2e-17 92.4 84 53.6
BraA06t23346Z Brassica rapa HOM05D003240 ORTHO05D009426 3.2e-17 92.4 84 54.8
A06p01190 Brassica napus HOM05D003240 ORTHO05D009426 4.1e-17 92.0 84 54.8
Thhalv10022293m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 5.4e-17 91.7 84 54.8
Medtr2g085370 Medicago truncatula HOM05D003240 ORTHO05D009426 7.1e-17 91.3 78 56.4
TAR627G0347 Trochodendron aralioides HOM05D003240 ORTHO05D009426 7.1e-17 91.3 73 54.8
Sp1g39680 Schrenkiella parvula HOM05D003240 ORTHO05D009426 1.2e-16 90.5 84 52.4
Aa31LG10G2000 Aethionema arabicum HOM05D003240 ORTHO05D009426 1.6e-16 90.1 84 52.4
BcaC08g43498 Brassica carinata HOM05D003240 ORTHO05D009426 1.6e-16 90.1 84 53.6
C06p08830 Brassica napus HOM05D003240 ORTHO05D009426 1.6e-16 90.1 84 53.6
BolC6t35961H Brassica oleracea HOM05D003240 ORTHO05D017503 1.6e-16 90.1 84 53.6
AL3G27700 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 2.1e-16 89.7 84 52.4
COL.COLO4_27180 Corchorus olitorius HOM05D003240 ORTHO05D009426 2.1e-16 89.7 86 52.3
Medtr2g085360 Medicago truncatula HOM05D003240 ORTHO05D009426 3.5e-16 89.0 78 52.6
Aqoxy1G02389 Aquilegia oxysepala HOM05D003240 ORTHO05D009426 6.0e-16 88.2 78 47.4
Sp3g13510 Schrenkiella parvula HOM05D003240 ORTHO05D009426 6.0e-16 88.2 84 52.4
THA.LOC104818082 Tarenaya hassleriana HOM05D003240 ORTHO05D009426 1.0e-15 87.4 56 64.3
Carub.0003s1496 Capsella rubella HOM05D003240 ORTHO05D009426 1.3e-15 87.0 84 50.0
BcaNung07375 Brassica carinata HOM05D003240 ORTHO05D009426 1.5e-14 83.6 56 60.7
BcaB04g20937 Brassica carinata HOM05D000882 ORTHO05D009426 3.3e-14 82.4 86 51.2
BcaC09g48486 Brassica carinata HOM05D003240 ORTHO05D009426 5.6e-14 81.6 55 60.0
ATR0737G149 Amborella trichopoda HOM05D003240 ORTHO05D009426 9.5e-14 80.9 69 60.9
TPR.G39028 Trifolium pratense HOM05D003240 ORTHO05D009426 9.5e-14 80.9 108 43.5
Lalb_Chr03g0042631 Lupinus albus HOM05D003240 ORTHO05D009426 2.8e-13 79.3 109 43.1
Nn1g04123 Nelumbo nucifera HOM05D003240 ORTHO05D009426 5.2e-12 75.1 76 47.4
Glyma.13G276200 Glycine max HOM05D003240 ORTHO05D009426 8.9e-12 74.3 57 54.4
PSO675G7736 Papaver somniferum HOM05D003240 ORTHO05D009426 1.9e-09 66.6 79 38.0
PSO541G3864 Papaver somniferum HOM05D003240 ORTHO05D009426 5.4e-09 65.1 79 36.7
Rhsim06G0199500 Rhododendron simsii HOM05D003240 ORTHO05D009426 1.0e-07 60.8 72 45.8
unitig_37.g12571 Utricularia gibba HOM05D003240 ORTHO05D009426 3.9e-07 58.9 69 39.1


User provided reference genes

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