Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013093 Daucus carota HOM05D000300 ORTHO05D008505 8.2e-90 334.7 343 100.0
Manes.03G111900 Manihot esculenta HOM05D000300 ORTHO05D008505 4.4e-75 285.8 172 83.1
Potri.011G121000 Populus trichocarpa HOM05D000300 ORTHO05D008505 1.4e-73 280.8 172 82.0
Dinv04313 Davidia involucrata HOM05D000300 ORTHO05D008505 5.3e-73 278.9 172 82.0
PGR031G2267 Punica granatum HOM05D000300 ORTHO05D008505 5.3e-73 278.9 172 86.0
Cc05_g12170 Coffea canephora HOM05D000300 ORTHO05D000383 7.0e-73 278.5 172 81.4
Oeu060546.1 Olea europaea HOM05D000300 ORTHO05D008505 9.1e-73 278.1 172 80.8
Ciclev10007647m.g Citrus clementina HOM05D000300 ORTHO05D000383 2.0e-72 276.9 172 80.8
Duzib213G0972 Durio zibethinus HOM05D000300 ORTHO05D008505 4.5e-72 275.8 172 79.7
Prupe.4G183600 Prunus persica HOM05D000300 ORTHO05D008505 4.5e-72 275.8 172 80.8
Sabra11G0105000 Salix brachista HOM05D000300 ORTHO05D008505 7.7e-72 275.0 173 82.1
Thecc.07G080900 Theobroma cacao HOM05D000300 ORTHO05D008505 1.0e-71 274.6 172 79.7
Peaxi162Scf00000g00412 Petunia axillaris HOM05D000300 ORTHO05D008505 2.2e-71 273.5 172 79.1
PGSC0003DMG400015358 Solanum tuberosum HOM05D000300 ORTHO05D008505 2.2e-71 273.5 172 78.5
MSTRG.6839 Avicennia marina HOM05D000300 ORTHO05D008505 2.9e-71 273.1 172 80.8
Hma1.2p1_1618F.1_g293900 Hydrangea macrophylla HOM05D000300 ORTHO05D008505 3.8e-71 272.7 172 80.2
GSVIVG01014363001 Vitis vinifera HOM05D000300 ORTHO05D000383 3.8e-71 272.7 171 78.4
Atru.chr2.2664 Acer truncatum HOM05D000300 ORTHO05D008505 5.0e-71 272.3 172 80.8
Aqoxy1G02483 Aquilegia oxysepala HOM05D000300 ORTHO05D008505 8.5e-71 271.6 171 80.1
Nn1g06576 Nelumbo nucifera HOM05D000300 ORTHO05D008505 1.9e-70 270.4 172 79.1
CiPaw.11G167900 Carya illinoinensis HOM05D000300 ORTHO05D008505 2.5e-70 270.0 172 79.7
Gohir.A04G028900 Gossypium hirsutum HOM05D000300 ORTHO05D008505 4.2e-70 269.2 172 78.5
Gohir.D05G358300 Gossypium hirsutum HOM05D000300 ORTHO05D008505 4.2e-70 269.2 172 78.5
SalBow7G1295 Salvia bowleyana HOM05D000300 ORTHO05D008505 4.2e-70 269.2 170 83.5
SalBow7G3546 Salvia bowleyana HOM05D000300 ORTHO05D008505 4.2e-70 269.2 170 83.5
MD11G1245300 Malus domestica HOM05D000300 ORTHO05D008505 5.5e-70 268.9 172 78.5
CSS0002162 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D008505 7.2e-70 268.5 172 79.1
QL08p020830 Quercus lobata HOM05D000300 ORTHO05D008505 1.2e-69 267.7 171 77.8
FvH4_3g20100 Fragaria vesca HOM05D000300 ORTHO05D008505 2.1e-69 266.9 168 79.8
FAN11G2262 Fragaria x ananassa HOM05D000300 ORTHO05D008505 2.1e-69 266.9 168 79.8
MD03G1225800 Malus domestica HOM05D000300 ORTHO05D008505 2.1e-69 266.9 172 77.9
Migut.M00819 Erythranthe guttata HOM05D000300 ORTHO05D008505 2.7e-69 266.5 169 82.2
RcHm_v2.0_Chr5g0033901 Rosa chinensis HOM05D000300 ORTHO05D008505 2.7e-69 266.5 168 79.8
TWI38G1039 Tripterygium wilfordii HOM05D000300 ORTHO05D008505 2.7e-69 266.5 172 78.5
Gorai.009G390800 Gossypium raimondii HOM05D000300 ORTHO05D008505 3.6e-69 266.2 172 77.9
FAN21G2789 Fragaria x ananassa HOM05D000300 ORTHO05D008505 1.0e-68 264.6 168 79.2
Lj3g0005060 Lotus japonicus HOM05D000300 ORTHO05D008505 1.0e-68 264.6 172 77.9
THA.LOC104813391 Tarenaya hassleriana HOM05D000300 ORTHO05D008505 1.0e-68 264.6 172 75.6
arahy.Tifrunner.gnm1.ann1.UT5NS3 Arachis hypogaea HOM05D000300 ORTHO05D008505 1.8e-68 263.8 172 78.5
arahy.Tifrunner.gnm1.ann1.Z7GNQ3 Arachis hypogaea HOM05D000300 ORTHO05D008505 1.8e-68 263.8 172 78.5
VMungo1080G0699 Vigna mungo HOM05D000300 ORTHO05D008505 1.8e-68 263.8 172 77.3
CANSAT56G2812 Cannabis sativa HOM05D000300 ORTHO05D008505 3.0e-68 263.1 172 78.5
MELO3C016520.2 Cucumis melo HOM05D000300 ORTHO05D008505 4.0e-68 262.7 172 76.7
Lalb_Chr20g0109791 Lupinus albus HOM05D000300 ORTHO05D008505 5.2e-68 262.3 172 77.3
Phvul.005G071500 Phaseolus vulgaris HOM05D000300 ORTHO05D008505 5.2e-68 262.3 172 76.7
vmacro11851 Vaccinium macrocarpon HOM05D000300 ORTHO05D008505 5.2e-68 262.3 172 77.3
PSO541G3772 Papaver somniferum HOM05D000300 ORTHO05D008505 6.8e-68 261.9 172 76.7
ClCG10G006870 Citrullus lanatus HOM05D000300 ORTHO05D008505 8.8e-68 261.5 172 76.2
Glyma.12G223300 Glycine max HOM05D000300 ORTHO05D008505 2.0e-67 260.4 172 75.6
PSO675G9140 Papaver somniferum HOM05D000300 ORTHO05D008505 2.6e-67 260.0 172 76.2
Glyma.13G278100 Glycine max HOM05D000300 ORTHO05D008505 3.4e-67 259.6 169 76.3
CsaV3_3G006220 Cucumis sativus L. HOM05D000300 ORTHO05D008505 5.7e-67 258.8 172 75.6
Thhalv10013922m.g Eutrema salsugineum HOM05D000300 ORTHO05D008505 7.5e-67 258.5 172 75.6
Medtr2g079460 Medicago truncatula HOM05D000300 ORTHO05D008505 7.5e-67 258.5 172 76.2
TPR.G38968 Trifolium pratense HOM05D000300 ORTHO05D008505 1.7e-66 257.3 172 76.2
Psat3g101080 Pisum sativum HOM05D000300 ORTHO05D008505 2.2e-66 256.9 172 76.2
Hma1.2p1_1738F.1_g299980 Hydrangea macrophylla HOM05D000300 ORTHO05D008505 2.8e-66 256.5 172 82.0
Os04g0530300 Oryza sativa ssp. japonica HOM05D000300 ORTHO05D008505 3.7e-66 256.1 171 74.3
ECA240G3136 Erigeron canadensis HOM05D000300 ORTHO05D008505 4.8e-66 255.8 166 81.3
Sp6g15870 Schrenkiella parvula HOM05D000300 ORTHO05D008505 4.8e-66 255.8 172 74.4
BcaC04g20418 Brassica carinata HOM05D000300 ORTHO05D008505 1.1e-65 254.6 171 74.3
A10p11170 Brassica napus HOM05D000300 ORTHO05D008505 1.1e-65 254.6 171 74.3
C09p43740 Brassica napus HOM05D000300 ORTHO05D008505 1.1e-65 254.6 171 74.3
BolC9t57259H Brassica oleracea HOM05D000300 ORTHO05D008505 1.1e-65 254.6 171 74.3
BraA10t43209Z Brassica rapa HOM05D000300 ORTHO05D008505 1.1e-65 254.6 171 74.3
BcaB08g35739 Brassica carinata HOM05D000300 ORTHO05D008505 1.8e-65 253.8 171 73.7
Lsat_1_v5_gn_9_97040 Lactuca sativa HOM05D000300 ORTHO05D008505 2.4e-65 253.4 168 81.0
Carub.0008s1409 Capsella rubella HOM05D000300 ORTHO05D008505 4.1e-65 252.7 171 74.3
Cpa.g.sc80.49 Carica papaya HOM05D000300 ORTHO05D008505 7.0e-65 251.9 165 75.8
AL8G28840 Arabidopsis lyrata HOM05D000300 ORTHO05D008505 1.2e-64 251.1 171 74.3
AT5G53800 Arabidopsis thaliana HOM05D000300 ORTHO05D008505 1.2e-64 251.1 171 74.3
HPP92_025994 Vanilla planifolia HOM05D000300 ORTHO05D008505 2.7e-64 250.0 172 73.3
SGA_v2.0_scaffold34G13828 Striga asiatica HOM05D000300 ORTHO05D008505 3.5e-64 249.6 205 66.3
Haze_09412 Corylus avellana HOM05D000300 ORTHO05D008505 1.0e-63 248.1 172 75.0
Solyc12g013790.3 Solanum lycopersicum HOM05D000300 ORTHO05D008505 1.2e-61 241.1 172 70.9
SEGI_35024 Sequoiadendron giganteum HOM05D000300 ORTHO05D008505 1.6e-61 240.7 165 72.7
Sopen12g007100 Solanum pennellii HOM05D000300 ORTHO05D008505 1.6e-61 240.7 171 71.3
Sed0021435 Sechium edule HOM05D000300 ORTHO05D008505 2.1e-61 240.4 172 75.6
Nitab4.5_0007374g0020 Nicotiana tabacum HOM05D000300 ORTHO05D008505 2.8e-61 240.0 221 60.2
Aa31LG3G10120 Aethionema arabicum HOM05D000300 ORTHO05D008505 3.6e-61 239.6 200 63.5
HanXRQChr03g0078531 Helianthus annuus HOM05D000300 ORTHO05D008505 4.7e-61 239.2 156 82.7
Hund02219 Selenicereus undatus HOM05D000300 ORTHO05D008505 3.0e-60 236.5 171 71.9
ATR0680G062 Amborella trichopoda HOM05D000300 ORTHO05D008505 6.8e-60 235.3 169 70.4
Sc16g0006940 Simmondsia chinensis HOM05D000300 ORTHO05D008505 7.5e-59 231.9 196 63.8
CDE02G0965 Ceratophyllum demersum HOM05D000300 ORTHO05D008505 4.1e-57 226.1 150 80.7
Zm00001eb075780 Zea mays HOM05D000300 ORTHO05D008505 4.1e-57 226.1 156 73.1
Rhsim06G0197200 Rhododendron simsii HOM05D000300 ORTHO05D008505 7.8e-56 221.9 150 76.7
Mapoly0026s0140 Marchantia polymorpha HOM05D000300 ORTHO05D008505 1.3e-55 221.1 163 67.5
Nitab4.5_0000662g0230 Nicotiana tabacum HOM05D000300 ORTHO05D008505 1.3e-55 221.1 193 62.7
MD11G1245600 Malus domestica HOM05D000300 ORTHO05D008505 6.6e-55 218.8 152 75.0
Ah.04g164930 Amaranthus hybridus HOM05D000300 ORTHO05D008505 1.1e-54 218.0 168 66.1
unitig_747.g21571 Utricularia gibba HOM05D000300 ORTHO05D008505 3.3e-54 216.5 160 71.2
Ca_01834_v3 Cicer arietinum L. HOM05D000300 ORTHO05D008505 7.3e-54 215.3 149 75.2
AagrBONN_evm.TU.Sc2ySwM_340.171 Anthoceros agrestis HOM05D000300 ORTHO05D008505 3.1e-52 209.9 165 64.2
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 7.8e-48 195.3 131 76.3
Pp3c25_13690 Physcomitrium patens HOM05D000300 ORTHO05D008505 8.6e-47 191.8 169 58.6
SMO367G0821 Selaginella moellendorffii HOM05D000300 ORTHO05D008505 2.5e-46 190.3 149 64.4
FAN16G2347 Fragaria x ananassa HOM05D000300 ORTHO05D008505 6.0e-40 169.1 118 75.4
Actinidia12817 Actinidia chinensis HOM05D000300 ORTHO05D008505 2.7e-32 143.7 72 91.7
AUR62029376 Chenopodium quinoa HOM05D000300 ORTHO05D008505 3.1e-28 130.2 105 65.7
AUR62034261 Chenopodium quinoa HOM05D000300 ORTHO05D008505 6.8e-28 129.0 105 64.8
MD11G1132100 Malus domestica HOM05D000300 ORTHO05D008505 2.0e-27 127.5 67 86.6
FAN25G2371 Fragaria x ananassa HOM05D000300 ORTHO05D008505 2.6e-27 127.1 65 90.8
Cre03.g176050 Chlamydomonas reinhardtii HOM05D000300 ORTHO05D008505 2.4e-25 120.6 168 41.7
COL.COLO4_09413 Corchorus olitorius HOM05D000300 ORTHO05D008505 7.1e-25 119.0 93 69.9
Nn1g04059 Nelumbo nucifera HOM05D000300 ORTHO05D008505 9.3e-25 118.6 96 65.6
EL10Ac4g08146 Beta vulgaris HOM05D000300 ORTHO05D008505 2.7e-24 117.1 123 56.1
MCO10G111 Micromonas commoda HOM05D000300 ORTHO05D008505 8.1e-21 105.5 164 36.0
CBR_g12199 Chara braunii HOM05D000300 ORTHO05D008505 6.9e-20 102.4 65 67.7
AL8G13240 Arabidopsis lyrata HOM05D000300 ORTHO05D008505 6.4e-18 95.9 61 77.0
GSVIVG01021702001 Vitis vinifera HOM05D000300 ORTHO05D008505 7.9e-16 89.0 67 73.1
GSVIVG01021454001 Vitis vinifera HOM05D000300 ORTHO05D008505 6.6e-15 85.9 67 70.1
TAR626G1261 Trochodendron aralioides HOM05D000300 ORTHO05D008505 4.3e-14 83.2 69 66.7
arahy.Tifrunner.gnm1.ann1.MM4FDC Arachis hypogaea HOM05D000300 ORTHO05D008505 9.6e-14 82.0 79 59.5
arahy.Tifrunner.gnm1.ann1.MF7AUF Arachis hypogaea HOM05D003391 ORTHO05D008505 2.2e-10 70.9 40 90.0
FAN25G3258 Fragaria x ananassa HOM05D000300 ORTHO05D008505 2.4e-09 67.4 72 51.4
GSVIVG01014364001 Vitis vinifera HOM05D000300 ORTHO05D008505 2.4e-09 67.4 32 90.6
arahy.Tifrunner.gnm1.ann1.1E0HE3 Arachis hypogaea HOM05D001903 ORTHO05D013215 2.7e-08 63.9 47 78.7
arahy.Tifrunner.gnm1.ann1.5AH57W Arachis hypogaea HOM05D000300 ORTHO05D008505 3.0e-07 60.5 36 88.9
arahy.Tifrunner.gnm1.ann1.VIP1CP Arachis hypogaea HOM05D000058 ORTHO05D008505 5.1e-07 59.7 37 73.0


User provided reference genes

Program Settings