Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013072 Daucus carota HOM05D007524 ORTHO05D009475 2.1e-160 568.9 279 100.0
Hma1.2p1_0057F.1_g032020 Hydrangea macrophylla HOM05D007524 ORTHO05D009475 7.9e-75 284.6 325 48.9
Sopen01g004060 Solanum pennellii HOM05D007524 ORTHO05D009475 5.9e-70 268.5 331 44.4
Dinv25593 Davidia involucrata HOM05D007524 ORTHO05D009475 4.2e-68 262.3 307 47.2
Solyc01g008520.3 Solanum lycopersicum HOM05D007524 ORTHO05D009475 5.5e-68 261.9 331 44.1
Peaxi162Scf00032g00619 Petunia axillaris HOM05D007524 ORTHO05D009475 7.9e-67 258.1 339 44.0
Actinidia07457 Actinidia chinensis HOM05D007524 ORTHO05D009475 3.9e-66 255.8 342 41.5
Thecc.02G312000 Theobroma cacao HOM05D007524 ORTHO05D009475 5.7e-65 251.9 331 42.3
Duzib248G0930 Durio zibethinus HOM05D007524 ORTHO05D009475 2.2e-64 250.0 330 41.5
TAR628G0034 Trochodendron aralioides HOM05D007524 ORTHO05D009475 2.4e-63 246.5 340 41.5
Aqoxy5G02489 Aquilegia oxysepala HOM05D007524 ORTHO05D009475 9.1e-63 244.6 316 43.7
Gohir.A13G091600 Gossypium hirsutum HOM05D007524 ORTHO05D009475 1.6e-62 243.8 331 42.0
Gorai.013G099200 Gossypium raimondii HOM05D007524 ORTHO05D009475 2.2e-61 240.0 331 41.7
GSVIVG01022414001 Vitis vinifera HOM05D007524 ORTHO05D009475 2.9e-61 239.6 324 43.5
Prupe.1G344400 Prunus persica HOM05D007524 ORTHO05D009475 5.0e-61 238.8 303 45.5
MD16G1006200 Malus domestica HOM05D007524 ORTHO05D009475 6.5e-61 238.4 315 43.8
Nitab4.5_0001747g0050 Nicotiana tabacum HOM05D007524 ORTHO05D009475 4.2e-60 235.7 328 42.4
RcHm_v2.0_Chr4g0446351 Rosa chinensis HOM05D007524 ORTHO05D009475 2.1e-59 233.4 315 41.0
Migut.C01263 Erythranthe guttata HOM05D007524 ORTHO05D009475 8.0e-59 231.5 317 40.1
Cc00_g05860 Coffea canephora HOM05D007524 ORTHO05D009475 3.0e-58 229.6 321 40.2
Lj3g0014826 Lotus japonicus HOM05D007524 ORTHO05D009475 3.0e-58 229.6 316 41.5
Rhsim08G0000700 Rhododendron simsii HOM05D007524 ORTHO05D009475 4.0e-58 229.2 314 42.7
PSO017G6978 Papaver somniferum HOM05D007524 ORTHO05D009475 5.7e-57 225.3 330 41.2
FAN07G0447 Fragaria x ananassa HOM05D007524 ORTHO05D009475 7.5e-57 224.9 309 40.8
Atru.chr11.1209 Acer truncatum HOM05D007524 ORTHO05D009475 9.7e-57 224.6 354 37.6
Nitab4.5_0000825g0060 Nicotiana tabacum HOM05D007524 ORTHO05D009475 1.7e-56 223.8 332 39.2
Glyma.12G029200 Glycine max HOM05D007524 ORTHO05D009475 2.2e-56 223.4 309 42.1
arahy.Tifrunner.gnm1.ann1.NAL0L4 Arachis hypogaea HOM05D007524 ORTHO05D009475 2.8e-56 223.0 314 40.1
Eucgr.J00844 Eucalyptus grandis HOM05D007524 ORTHO05D009475 2.8e-56 223.0 317 40.7
Medtr4g074200 Medicago truncatula HOM05D007524 ORTHO05D009475 6.3e-56 221.9 315 41.0
Haze_11736 Corylus avellana HOM05D007524 ORTHO05D009475 2.4e-55 219.9 383 37.6
TPR.G21554 Trifolium pratense HOM05D007524 ORTHO05D009475 2.4e-55 219.9 316 41.5
FvH4_4g36590 Fragaria vesca HOM05D007524 ORTHO05D009475 3.1e-55 219.5 312 39.4
FAN17G0147 Fragaria x ananassa HOM05D007524 ORTHO05D009475 3.1e-55 219.5 304 41.1
VMungo1127G1744 Vigna mungo HOM05D007524 ORTHO05D009475 9.1e-55 218.0 311 41.5
Glyma.11G104200 Glycine max HOM05D007524 ORTHO05D009475 1.2e-54 217.6 309 41.1
arahy.Tifrunner.gnm1.ann1.SSM27G Arachis hypogaea HOM05D007524 ORTHO05D009475 3.5e-54 216.1 313 39.6
Sed0011089 Sechium edule HOM05D007524 ORTHO05D009475 3.8e-53 212.6 309 40.8
Gohir.D13G086900 Gossypium hirsutum HOM05D007524 ORTHO05D009475 5.0e-53 212.2 298 40.6
MELO3C020032.2 Cucumis melo HOM05D007524 ORTHO05D009475 1.9e-52 210.3 323 39.3
PGR119G1695 Punica granatum HOM05D007524 ORTHO05D009475 4.2e-52 209.1 327 37.6
THA.LOC104818453 Tarenaya hassleriana HOM05D007524 ORTHO05D009475 7.2e-52 208.4 346 36.4
Sc06g0003090 Simmondsia chinensis HOM05D007524 ORTHO05D009475 9.4e-52 208.0 329 38.0
Manes.03G082500 Manihot esculenta HOM05D007524 ORTHO05D009475 1.2e-51 207.6 315 41.3
Lsat_1_v5_gn_1_28521 Lactuca sativa HOM05D007524 ORTHO05D009475 2.1e-51 206.8 320 37.5
Thhalv10005594m.g Eutrema salsugineum HOM05D007524 ORTHO05D009475 6.1e-51 205.3 310 40.0
CsaV3_5G013190 Cucumis sativus L. HOM05D007524 ORTHO05D009475 8.0e-51 204.9 313 39.6
Oeu032986.1 Olea europaea HOM05D007524 ORTHO05D009475 8.0e-51 204.9 268 44.4
FAN12G0445 Fragaria x ananassa HOM05D007524 ORTHO05D009475 4.0e-50 202.6 272 41.2
Carub.0008s2532 Capsella rubella HOM05D007524 ORTHO05D009475 1.5e-49 200.7 346 37.0
AUR62039047 Chenopodium quinoa HOM05D007524 ORTHO05D009475 3.4e-49 199.5 317 38.5
Psat7g173160 Pisum sativum HOM05D007524 ORTHO05D009475 3.4e-49 199.5 281 40.9
Lalb_Chr19g0139281 Lupinus albus HOM05D007524 ORTHO05D009475 5.7e-49 198.7 327 38.2
HanXRQChr04g0100921 Helianthus annuus HOM05D007524 ORTHO05D009475 7.5e-49 198.4 315 38.7
SGA_v2.0_scaffold118G32494 Striga asiatica HOM05D007524 ORTHO05D009475 1.3e-48 197.6 346 36.7
AT5G64520 Arabidopsis thaliana HOM05D007524 ORTHO05D009475 1.7e-48 197.2 340 38.2
BraA09t36516Z Brassica rapa HOM05D007524 ORTHO05D009475 2.2e-48 196.8 333 38.4
A09p08680 Brassica napus HOM05D007524 ORTHO05D009475 3.7e-48 196.1 329 37.7
PSO063G3654 Papaver somniferum HOM05D007524 ORTHO05D009475 3.7e-48 196.1 285 42.5
Sp2g27600 Schrenkiella parvula HOM05D007524 ORTHO05D009475 3.7e-48 196.1 342 37.4
BcaC04g23318 Brassica carinata HOM05D007524 ORTHO05D009475 4.8e-48 195.7 334 37.4
BolC9t53889H Brassica oleracea HOM05D007524 ORTHO05D009475 1.8e-47 193.7 332 38.3
BcaB04g19971 Brassica carinata HOM05D007524 ORTHO05D009475 3.1e-47 193.0 338 36.4
C09p09780 Brassica napus HOM05D007524 ORTHO05D009475 3.1e-47 193.0 328 37.5
ECA247G1633 Erigeron canadensis HOM05D007524 ORTHO05D009475 4.1e-47 192.6 326 37.1
ATR0584G209 Amborella trichopoda HOM05D007524 ORTHO05D009475 1.6e-46 190.7 281 40.6
AL8G41910 Arabidopsis lyrata HOM05D007524 ORTHO05D009475 2.0e-46 190.3 344 37.5
CARHR278490 Cardamine hirsuta HOM05D007524 ORTHO05D009475 4.5e-46 189.1 343 36.2
Aa31LG1G17400 Aethionema arabicum HOM05D007524 ORTHO05D009475 7.7e-46 188.3 336 34.8
Zm00001eb146450 Zea mays HOM05D007524 ORTHO05D009475 2.3e-45 186.8 333 34.2
AUR62004790 Chenopodium quinoa HOM05D007524 ORTHO05D009475 3.8e-45 186.0 280 41.4
unitig_46.g18111 Utricularia gibba HOM05D007524 ORTHO05D009475 4.0e-42 176.0 319 35.7
vmacro18683 Vaccinium macrocarpon HOM05D007524 ORTHO05D009475 4.4e-41 172.6 252 40.1
CANSAT11G0990 Cannabis sativa HOM05D007524 ORTHO05D009475 2.8e-40 169.9 249 40.2
Hund06881 Selenicereus undatus HOM05D007524 ORTHO05D009475 4.9e-40 169.1 285 37.5
EL10Ac4g08947 Beta vulgaris HOM05D007524 ORTHO05D009475 3.1e-39 166.4 403 31.3
Phvul.011G032400 Phaseolus vulgaris HOM05D007524 ORTHO05D009475 1.6e-38 164.1 216 43.1
Ca_03043_v3 Cicer arietinum L. HOM05D007524 ORTHO05D009475 5.0e-37 159.1 208 43.3
PGSC0003DMG401031484 Solanum tuberosum HOM05D007524 ORTHO05D009475 1.6e-35 154.1 111 66.7
PGSC0003DMG400019097 Solanum tuberosum HOM05D007524 ORTHO05D009475 1.4e-34 151.0 118 61.9
Mapoly0070s0006 Marchantia polymorpha HOM05D007524 ORTHO05D009475 2.6e-33 146.7 325 31.1
Nn5g27871 Nelumbo nucifera HOM05D007524 ORTHO05D009475 1.3e-32 144.4 119 58.8
CAN.G821.7 Capsicum annuum HOM05D007524 ORTHO05D009475 1.8e-31 140.6 115 60.0
COL.COLO4_27673 Corchorus olitorius HOM05D007524 ORTHO05D009475 9.2e-31 138.3 108 60.2
PGSC0003DMG400010497 Solanum tuberosum HOM05D007524 ORTHO05D009475 1.1e-28 131.3 150 48.7
Cpa.g.sc63.24 Carica papaya HOM05D007524 ORTHO05D009475 2.1e-27 127.1 95 65.3
ClCG11G001140 Citrullus lanatus HOM05D007524 ORTHO05D009475 4.7e-27 125.9 100 59.0
Nn5g27870 Nelumbo nucifera HOM05D007524 ORTHO05D009475 6.2e-27 125.6 171 39.8
AagrBONN_evm.TU.Sc2ySwM_368.2219 Anthoceros agrestis HOM05D007524 ORTHO05D009475 1.7e-24 117.5 297 30.6
CiPaw.06G059700 Carya illinoinensis HOM05D007524 ORTHO05D009475 4.9e-24 115.9 218 35.8
SMO367G0885 Selaginella moellendorffii HOM05D007524 ORTHO05D009475 6.4e-24 115.5 289 28.4
Pp3c1_6220 Physcomitrium patens HOM05D007524 ORTHO05D009475 1.9e-15 87.4 319 26.6
Ah.06g191680 Amaranthus hybridus HOM05D007524 ORTHO05D009475 3.6e-11 73.2 57 66.7
CBR_g6685 Chara braunii HOM05D007524 ORTHO05D009475 1.8e-10 70.9 110 36.4
MCO09G042 Micromonas commoda HOM05D007524 ORTHO05D009475 8.9e-10 68.6 137 31.4


User provided reference genes

Program Settings