Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013064 Daucus carota HOM05D005273 ORTHO05D006195 1.6e-202 709.1 349 100.0
GSVIVG01020564001 Vitis vinifera HOM05D005273 ORTHO05D006195 2.0e-176 622.5 345 83.2
Sopen02g021070 Solanum pennellii HOM05D005273 ORTHO05D006195 1.9e-174 615.9 343 84.0
Solyc02g072105.1 Solanum lycopersicum HOM05D005273 ORTHO05D006195 2.5e-174 615.5 343 84.0
Hma1.2p1_0002F.1_g002020 Hydrangea macrophylla HOM05D005273 ORTHO05D006195 1.2e-173 613.2 346 83.2
MSTRG.21306 Avicennia marina HOM05D005273 ORTHO05D006195 3.5e-173 611.7 346 80.9
PGSC0003DMG400028417 Solanum tuberosum HOM05D005273 ORTHO05D006195 3.5e-173 611.7 343 83.4
CSS0011944 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.0e-172 610.1 346 82.7
CSS0048709 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.0e-172 610.1 346 82.7
FvH4_6g26410 Fragaria vesca HOM05D005273 ORTHO05D006195 1.0e-172 610.1 343 82.5
Sabra07G0113000 Salix brachista HOM05D005273 ORTHO05D006195 1.3e-172 609.8 346 81.2
Migut.D02068 Erythranthe guttata HOM05D005273 ORTHO05D006195 1.8e-172 609.4 343 81.3
Gohir.A11G060000 Gossypium hirsutum HOM05D005273 ORTHO05D006195 3.9e-172 608.2 343 81.9
Potri.007G139700 Populus trichocarpa HOM05D005273 ORTHO05D006195 5.1e-172 607.8 346 80.9
FAN05G3218 Fragaria x ananassa HOM05D005273 ORTHO05D006195 6.7e-172 607.4 343 82.2
Nn1g04120 Nelumbo nucifera HOM05D005273 ORTHO05D006195 8.7e-172 607.1 343 81.9
RcHm_v2.0_Chr2g0127911 Rosa chinensis HOM05D005273 ORTHO05D006195 1.1e-171 606.7 345 81.7
Gorai.007G069300 Gossypium raimondii HOM05D005273 ORTHO05D006195 2.5e-171 605.5 343 81.3
QL08p039365 Quercus lobata HOM05D005273 ORTHO05D006195 2.5e-171 605.5 343 82.8
Ciclev10015816m.g Citrus clementina HOM05D005273 ORTHO05D006195 3.3e-171 605.1 346 81.2
CAN.G411.45 Capsicum annuum HOM05D005273 ORTHO05D006195 4.3e-171 604.7 342 82.5
Manes.02G045100 Manihot esculenta HOM05D005273 ORTHO05D006195 4.3e-171 604.7 341 81.5
CANSAT64G2383 Cannabis sativa HOM05D005273 ORTHO05D006195 5.7e-171 604.4 343 81.0
Gohir.D11G064100 Gossypium hirsutum HOM05D005273 ORTHO05D006195 7.4e-171 604.0 343 81.0
Lsat_1_v5_gn_4_66761 Lactuca sativa HOM05D005273 ORTHO05D006195 7.4e-171 604.0 343 80.5
CANSAT64G2205 Cannabis sativa HOM05D005273 ORTHO05D006195 9.6e-171 603.6 341 81.8
ECA246G2010 Erigeron canadensis HOM05D005273 ORTHO05D006195 1.3e-170 603.2 347 81.3
Nn1g06518 Nelumbo nucifera HOM05D005273 ORTHO05D006195 1.6e-170 602.8 346 80.6
Duzib264G0403 Durio zibethinus HOM05D005273 ORTHO05D006195 2.1e-170 602.4 343 82.2
Duzib147G0196 Durio zibethinus HOM05D005273 ORTHO05D006195 3.7e-170 601.7 343 81.6
HanXRQChr15g0466031 Helianthus annuus HOM05D005273 ORTHO05D006195 8.2e-170 600.5 343 80.2
Atru.chr6.2972 Acer truncatum HOM05D005273 ORTHO05D006195 3.1e-169 598.6 346 81.2
CDE08G0645 Ceratophyllum demersum HOM05D005273 ORTHO05D006195 4.1e-169 598.2 345 79.7
Cc06_g20460 Coffea canephora HOM05D005273 ORTHO05D006195 5.3e-169 597.8 346 81.5
SalBow1G1167 Salvia bowleyana HOM05D005273 ORTHO05D006195 6.9e-169 597.4 343 81.0
MD09G1233100 Malus domestica HOM05D005273 ORTHO05D006195 1.2e-168 596.7 341 81.2
ClCG10G015250 Citrullus lanatus HOM05D005273 ORTHO05D006195 1.5e-168 596.3 343 79.9
TWI59G0041 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 2.6e-168 595.5 346 80.6
Prupe.3G131200 Prunus persica HOM05D005273 ORTHO05D006195 4.5e-168 594.7 343 81.3
Sabra07G0117800 Salix brachista HOM05D005273 ORTHO05D006195 4.5e-168 594.7 363 76.9
Thhalv10025474m.g Eutrema salsugineum HOM05D005273 ORTHO05D006195 1.3e-167 593.2 343 79.9
Sc21g0002980 Simmondsia chinensis HOM05D005273 ORTHO05D006195 3.8e-167 591.7 343 77.8
Carub.0007s1834 Capsella rubella HOM05D005273 ORTHO05D006195 5.0e-167 591.3 345 78.6
COL.COLO4_33584 Corchorus olitorius HOM05D005273 ORTHO05D006195 5.0e-167 591.3 343 78.4
SalBow1G7481 Salvia bowleyana HOM05D005273 ORTHO05D006195 6.5e-167 590.9 346 80.1
PGR142G4354 Punica granatum HOM05D005273 ORTHO05D006195 1.4e-166 589.7 343 80.5
Haze_12807 Corylus avellana HOM05D005273 ORTHO05D006195 1.9e-166 589.3 358 78.5
PSO782G4868 Papaver somniferum HOM05D005273 ORTHO05D006195 1.9e-166 589.3 348 78.4
VMungo1127G0137 Vigna mungo HOM05D005273 ORTHO05D006195 5.5e-166 587.8 341 79.8
Sp7g21020 Schrenkiella parvula HOM05D005273 ORTHO05D006195 7.2e-166 587.4 343 78.7
PSO478G2492 Papaver somniferum HOM05D005273 ORTHO05D006195 9.3e-166 587.0 348 78.2
Aqoxy6G00048 Aquilegia oxysepala HOM05D005273 ORTHO05D006195 1.2e-165 586.6 349 78.5
CARHR229970 Cardamine hirsuta HOM05D005273 ORTHO05D006195 1.6e-165 586.3 343 77.8
CsaV3_3G041260 Cucumis sativus L. HOM05D005273 ORTHO05D006195 2.7e-165 585.5 343 78.4
A03p53890 Brassica napus HOM05D005273 ORTHO05D006195 4.6e-165 584.7 343 78.4
BraA03t14458Z Brassica rapa HOM05D005273 ORTHO05D006195 4.6e-165 584.7 343 78.4
Sed0018091 Sechium edule HOM05D005273 ORTHO05D006195 4.6e-165 584.7 343 77.8
Hund09652 Selenicereus undatus HOM05D005273 ORTHO05D006195 4.6e-165 584.7 345 77.7
arahy.Tifrunner.gnm1.ann1.EEV1KR Arachis hypogaea HOM05D005273 ORTHO05D006195 7.9e-165 583.9 341 79.2
A01p14180 Brassica napus HOM05D005273 ORTHO05D006195 7.9e-165 583.9 343 77.6
AUR62012902 Chenopodium quinoa HOM05D005273 ORTHO05D006195 7.9e-165 583.9 345 79.1
unitig_899.g15313 Utricularia gibba HOM05D005273 ORTHO05D006195 7.9e-165 583.9 343 79.9
ATR0737G119 Amborella trichopoda HOM05D005273 ORTHO05D006195 1.0e-164 583.6 343 78.1
Carub.0001s3611 Capsella rubella HOM05D005273 ORTHO05D006195 1.3e-164 583.2 343 77.8
THA.LOC104823543 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 1.3e-164 583.2 341 78.6
BraA01t01367Z Brassica rapa HOM05D005273 ORTHO05D006195 2.3e-164 582.4 343 77.3
AL7G30590 Arabidopsis lyrata HOM05D005273 ORTHO05D006195 3.0e-164 582.0 343 78.1
Aa31LG2G13370 Aethionema arabicum HOM05D005273 ORTHO05D006195 3.9e-164 581.6 343 77.3
arahy.Tifrunner.gnm1.ann1.RDE8QD Arachis hypogaea HOM05D005273 ORTHO05D006195 3.9e-164 581.6 341 78.6
Ca_18943_v3 Cicer arietinum L. HOM05D005273 ORTHO05D006195 3.9e-164 581.6 341 78.3
Glyma.12G114500 Glycine max HOM05D005273 ORTHO05D006195 3.9e-164 581.6 341 78.9
Ah.11g045620 Amaranthus hybridus HOM05D005273 ORTHO05D006195 6.7e-164 580.9 343 77.3
arahy.Tifrunner.gnm1.ann1.891C6J Arachis hypogaea HOM05D005273 ORTHO05D006195 1.5e-163 579.7 341 78.6
BolC7t45723H Brassica oleracea HOM05D005273 ORTHO05D006195 1.9e-163 579.3 343 77.8
AT4G22930 Arabidopsis thaliana HOM05D005273 ORTHO05D006195 5.7e-163 577.8 343 77.0
THA.LOC104814179 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 5.7e-163 577.8 341 78.9
Phvul.011G119600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 7.4e-163 577.4 341 78.3
Eucgr.K01040 Eucalyptus grandis HOM05D005273 ORTHO05D006195 9.7e-163 577.0 343 78.4
BcaNung01659 Brassica carinata HOM05D005273 ORTHO05D006195 1.3e-162 576.6 344 76.7
Os01g0747500 Oryza sativa ssp. japonica HOM05D005273 ORTHO05D006195 2.2e-162 575.9 342 76.6
C07p52300 Brassica napus HOM05D005273 ORTHO05D006195 3.7e-162 575.1 343 77.3
MELO3C009854.2 Cucumis melo HOM05D005273 ORTHO05D006195 3.7e-162 575.1 352 76.1
Lj3g0011026 Lotus japonicus HOM05D005273 ORTHO05D006195 4.8e-162 574.7 341 77.7
Lalb_Chr03g0027211 Lupinus albus HOM05D005273 ORTHO05D006195 1.8e-161 572.8 341 77.7
Glyma.06G291600 Glycine max HOM05D005273 ORTHO05D006195 3.1e-161 572.0 341 77.4
Medtr4g078370 Medicago truncatula HOM05D005273 ORTHO05D006195 3.1e-161 572.0 341 76.5
arahy.Tifrunner.gnm1.ann1.YR7R6W Arachis hypogaea HOM05D005273 ORTHO05D006195 6.9e-161 570.9 337 78.0
Psat7g169200 Pisum sativum HOM05D005273 ORTHO05D006195 6.9e-161 570.9 341 76.5
HPP92_004898 Vanilla planifolia HOM05D005273 ORTHO05D006195 6.9e-161 570.9 346 76.3
EL10Ac3g07435 Beta vulgaris HOM05D005273 ORTHO05D006195 9.0e-161 570.5 357 75.6
SGA_v2.0_scaffold25G10971 Striga asiatica HOM05D005273 ORTHO05D006195 9.0e-161 570.5 350 78.6
Phvul.010G107600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 1.2e-160 570.1 341 77.7
vmacro12316 Vaccinium macrocarpon HOM05D005273 ORTHO05D006195 1.2e-160 570.1 432 65.7
TAR627G0042 Trochodendron aralioides HOM05D005273 ORTHO05D006195 3.4e-160 568.5 362 74.0
CiPaw.04G127500 Carya illinoinensis HOM05D005273 ORTHO05D006195 7.7e-160 567.4 318 83.0
AUR62011776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 2.5e-158 562.4 390 69.5
TWI18G0085 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 3.6e-157 558.5 343 77.6
Zm00001eb153030 Zea mays HOM05D005273 ORTHO05D006195 7.9e-157 557.4 342 74.3
Rhsim06G0140600 Rhododendron simsii HOM05D005273 ORTHO05D006195 1.7e-154 549.7 449 62.1
SHI10390 Sapria himalayana HOM05D005273 ORTHO05D006195 4.5e-152 541.6 345 71.9
C01p17440 Brassica napus HOM05D000022 ORTHO05D006195 3.9e-148 528.5 349 71.9
BcaC09g51057 Brassica carinata HOM05D000022 ORTHO05D006195 1.3e-146 523.5 354 69.8
Dinv04937 Davidia involucrata HOM05D005273 ORTHO05D006195 1.0e-143 513.8 346 72.5
Lj5g0005541 Lotus japonicus HOM05D005273 ORTHO05D006195 1.0e-143 513.8 304 78.0
SMO347G0496 Selaginella moellendorffii HOM05D005273 ORTHO05D006195 2.7e-141 505.8 346 69.7
Cpa.g.sc83.46 Carica papaya HOM05D005273 ORTHO05D006195 1.0e-140 503.8 341 71.0
Mapoly0001s0029 Marchantia polymorpha HOM05D005273 ORTHO05D006195 1.4e-140 503.4 347 68.0
Pp3c13_8930 Physcomitrium patens HOM05D005273 ORTHO05D006195 7.0e-137 491.1 339 68.4
Thecc.01G150900 Theobroma cacao HOM05D005273 ORTHO05D006195 3.6e-133 478.8 270 82.2
CBR_g21229 Chara braunii HOM05D005273 ORTHO05D006195 2.2e-127 459.5 326 65.3
MBI07_g30188_MAGBIO Magnolia biondii HOM05D005273 ORTHO05D006195 1.1e-126 457.2 346 65.0
AUR62011723 Chenopodium quinoa HOM05D005273 ORTHO05D006195 3.6e-125 452.2 256 80.9
AUR62024621 Chenopodium quinoa HOM05D005273 ORTHO05D006195 4.4e-123 445.3 254 80.3
Nitab4.5_0006070g0020 Nicotiana tabacum HOM05D005273 ORTHO05D006195 1.3e-119 433.7 311 69.1
Nitab4.5_0000437g0040 Nicotiana tabacum HOM05D005273 ORTHO05D006195 2.3e-119 433.0 311 68.8
Cfa014627 Carpinus fangiana HOM05D005273 ORTHO05D006195 6.8e-116 421.4 386 57.5
Cre11.g467550 Chlamydomonas reinhardtii HOM05D005273 ORTHO05D006195 8.9e-116 421.0 339 59.0
BolC1t01684H Brassica oleracea HOM05D005273 ORTHO05D006195 1.2e-109 400.6 232 77.2
CSS0013056 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.5e-107 393.7 318 62.9
Thecc.K0007100 Theobroma cacao HOM05D005273 ORTHO05D006195 1.5e-107 393.7 228 80.7
MCO16G183 Micromonas commoda HOM05D005273 ORTHO05D006195 3.4e-107 392.5 339 55.5
CSS0022573 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.1e-102 377.5 348 58.9
AagrBONN_evm.TU.Sc2ySwM_117.50 Anthoceros agrestis HOM05D005273 ORTHO05D006195 5.2e-100 368.6 245 70.6
Haze_27262 Corylus avellana HOM05D005273 ORTHO05D006195 7.8e-96 354.8 345 51.6
PRCOL_00003989 Prasinoderma coloniale HOM05D005273 ORTHO05D006195 3.6e-93 345.9 341 52.8
Lj1C718T2 Lonicera japonica HOM05D005273 ORTHO05D006195 4.0e-92 342.4 190 85.8
QL08p039454 Quercus lobata HOM05D005273 ORTHO05D006195 4.4e-91 339.0 254 67.3
FAN02G4311 Fragaria x ananassa HOM05D005273 ORTHO05D006195 1.2e-88 330.9 189 82.0
Actinidia11084 Actinidia chinensis HOM05D005273 ORTHO05D006195 3.2e-81 306.2 175 82.9
Atru.chr6.2977 Acer truncatum HOM05D005273 ORTHO05D006195 6.9e-76 288.5 221 66.1
SEGI_10566 Sequoiadendron giganteum HOM05D005273 ORTHO05D006195 7.4e-62 241.9 151 73.5
Peaxi162Scf00112g00113 Petunia axillaris HOM05D005273 ORTHO05D006195 8.4e-58 228.4 134 80.6
Lj1A718G26 Lonicera japonica HOM05D005273 ORTHO05D006195 2.4e-52 210.3 117 79.5
Peaxi162Scf00112g00110 Petunia axillaris HOM05D005273 ORTHO05D006195 3.1e-52 209.9 114 81.6
Oeu007130.1 Olea europaea HOM05D005273 ORTHO05D006195 1.7e-50 204.1 345 37.4
TPR.G7356 Trifolium pratense HOM05D005273 ORTHO05D006195 2.7e-40 170.2 94 81.9
EL10Ac9g21222 Beta vulgaris HOM05D005273 ORTHO05D006195 1.8e-39 167.5 276 41.3
Atru.chr6.2976 Acer truncatum HOM05D005273 ORTHO05D006195 8.8e-39 165.2 99 78.8
Cfa022577 Carpinus fangiana HOM05D005273 ORTHO05D006195 9.1e-36 155.2 319 34.8
Lj3g0005703 Lotus japonicus HOM05D002777 ORTHO05D001516 8.0e-24 115.5 81 70.4
AUR62041872 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.2e-22 111.7 95 56.8
AUR62036776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 6.3e-21 105.9 171 40.4
BcaNung01011 Brassica carinata HOM05D005273 ORTHO05D006195 8.2e-21 105.5 261 32.2
Lalb_Chr09g0333161 Lupinus albus HOM05D005273 ORTHO05D006195 1.0e-18 98.6 85 58.8
TPR.G31736 Trifolium pratense HOM05D005273 ORTHO05D006195 1.8e-12 77.8 45 75.6
Lj5A796T26 Lonicera japonica HOM05D005273 ORTHO05D006195 4.5e-11 73.2 44 72.7


User provided reference genes

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