Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 4.9e-143 511.1 263 100.0
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 4.1e-105 385.2 320 65.9
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 6.1e-101 371.3 331 62.5
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 1.0e-100 370.5 333 63.1
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 1.8e-100 369.8 333 61.0
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 1.5e-99 366.7 329 61.4
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 2.0e-99 366.3 320 63.1
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 5.7e-99 364.8 340 60.0
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 9.7e-99 364.0 328 61.0
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 3.7e-98 362.1 327 61.5
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 3.7e-98 362.1 332 60.2
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 6.3e-98 361.3 334 61.1
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 1.4e-97 360.1 340 59.7
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.4e-97 360.1 326 61.0
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 1.4e-97 360.1 333 62.8
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 2.4e-97 359.4 330 60.3
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 4.1e-97 358.6 326 61.3
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 4.1e-97 358.6 333 59.8
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 5.3e-97 358.2 322 60.9
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 6.9e-97 357.8 340 57.4
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 2.0e-96 356.3 320 61.2
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 3.4e-96 355.5 323 60.7
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 1.0e-95 354.0 320 60.9
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 1.3e-95 353.6 333 58.0
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 1.3e-95 353.6 328 60.4
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 1.7e-95 353.2 337 59.3
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 2.9e-95 352.4 338 59.8
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 3.8e-95 352.1 333 58.9
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 5.0e-95 351.7 323 60.1
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 5.0e-95 351.7 333 58.9
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 6.5e-95 351.3 333 58.6
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 1.4e-94 350.1 333 59.2
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 2.7e-93 345.9 332 56.6
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 7.9e-93 344.4 335 57.6
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 1.4e-92 343.6 333 56.5
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 5.2e-92 341.7 332 56.9
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 6.7e-92 341.3 322 57.8
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 1.1e-91 340.5 335 57.6
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 3.3e-91 339.0 329 56.8
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 4.4e-91 338.6 319 58.0
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 4.4e-91 338.6 323 57.3
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 7.4e-91 337.8 322 58.7
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 9.7e-91 337.4 322 58.4
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 9.7e-91 337.4 322 58.4
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 9.7e-91 337.4 335 55.8
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.3e-90 337.0 333 57.1
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 4.8e-90 335.1 319 57.7
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 5.3e-89 331.6 333 55.6
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 7.0e-89 331.3 322 57.1
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 1.2e-88 330.5 332 54.5
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 2.0e-88 329.7 337 54.6
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 4.5e-88 328.6 332 54.5
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 4.2e-86 322.0 335 54.0
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 4.2e-86 322.0 319 56.4
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 1.2e-85 320.5 332 54.2
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 2.7e-85 319.3 329 53.8
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 1.4e-84 317.0 383 50.7
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 8.2e-82 307.8 444 45.0
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 1.0e-79 300.8 277 60.6
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 1.3e-74 283.9 328 52.7
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 2.8e-74 282.7 336 51.5
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 1.3e-71 273.9 246 60.6
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 5.0e-71 271.9 246 60.6
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 8.6e-71 271.2 227 64.3
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 8.0e-69 264.6 240 59.6
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.5e-67 260.4 347 48.7
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 5.7e-67 258.5 240 58.8
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 9.8e-67 257.7 300 50.7
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 2.3e-63 246.5 291 49.5
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 3.8e-63 245.7 276 49.3
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 3.8e-63 245.7 339 43.4
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 1.2e-61 240.7 322 43.5
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 4.7e-61 238.8 245 54.3
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 3.2e-57 226.1 328 39.9
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 1.2e-56 224.2 264 48.1
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 6.0e-56 221.9 131 84.7
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 1.0e-55 221.1 146 76.7
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 7.3e-54 214.9 146 75.3
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 2.3e-52 209.9 140 72.1
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 8.9e-44 181.4 317 37.5
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 5.8e-43 178.7 102 84.3
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 3.2e-41 172.9 325 32.9
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 6.0e-40 168.7 326 34.7
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 3.9e-39 166.0 197 51.3
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 1.1e-38 164.5 171 53.2
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 2.3e-31 140.2 344 31.1
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 3.0e-31 139.8 172 46.5
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 1.1e-30 137.9 232 40.1
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 1.1e-28 131.3 395 28.1
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 2.4e-28 130.2 296 31.1
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 3.1e-28 129.8 136 52.2
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 1.5e-27 127.5 299 29.4
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 2.9e-26 123.2 105 60.0
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 1.1e-25 121.3 299 31.8
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 1.1e-25 121.3 302 30.8
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.0e-23 114.8 145 49.7
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 1.7e-23 114.0 61 90.2
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 4.3e-22 109.4 308 28.2
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 4.8e-21 105.9 307 27.0
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 1.2e-19 101.3 126 46.0
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 3.4e-19 99.8 71 71.8
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 1.7e-18 97.4 71 70.4
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 7.9e-16 88.6 156 40.4
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 1.3e-15 87.8 176 36.9
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 7.4e-14 82.0 68 63.2
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 3.7e-13 79.7 318 24.5
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 4.8e-13 79.3 92 48.9
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 8.1e-13 78.6 139 38.1
Ah.07g202300 Amaranthus hybridus HOM05D006652 ORTHO05D008645 1.1e-12 78.2 57 66.7
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.8e-12 77.4 327 25.7
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 2.2e-10 70.5 147 32.0
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 2.2e-10 70.5 46 67.4
Ah.08g222620 Amaranthus hybridus HOM05D006652 ORTHO05D008645 3.8e-10 69.7 65 56.9
Haze_13352 Corylus avellana HOM05D006652 ORTHO05D008645 1.1e-09 68.2 97 39.2


User provided reference genes

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