Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013048 Daucus carota HOM05D007603 ORTHO05D009604 7.3e-110 400.6 205 100.0
SalBow7G0820 Salvia bowleyana HOM05D007603 ORTHO05D009604 9.7e-30 134.4 217 48.4
CSS0037684 Camellia sinensis var. sinensis HOM05D007603 ORTHO05D009604 4.1e-28 129.0 234 44.9
Oeu016901.1 Olea europaea HOM05D007603 ORTHO05D009604 5.3e-28 128.6 237 44.7
Actinidia10989 Actinidia chinensis HOM05D007603 ORTHO05D009604 2.7e-27 126.3 185 45.9
Oeu036085.1 Olea europaea HOM05D007603 ORTHO05D009604 4.5e-27 125.6 247 42.9
HanXRQChr08g0231781 Helianthus annuus HOM05D007603 ORTHO05D009604 1.7e-26 123.6 217 47.5
Hma1.2p1_0002F.1_g002370 Hydrangea macrophylla HOM05D007603 ORTHO05D009604 8.5e-26 121.3 228 44.3
PGSC0003DMG400009384 Solanum tuberosum HOM05D007603 ORTHO05D009604 8.5e-26 121.3 248 44.0
Solyc07g150145.1 Solanum lycopersicum HOM05D007603 ORTHO05D009604 5.5e-25 118.6 240 44.2
ClCG02G002280 Citrullus lanatus HOM05D007603 ORTHO05D009604 2.1e-24 116.7 241 43.6
Manes.13G141000 Manihot esculenta HOM05D007603 ORTHO05D009604 2.1e-24 116.7 242 43.0
Sabra13G0062200 Salix brachista HOM05D007603 ORTHO05D009604 1.4e-23 114.0 244 45.1
MELO3C018861.2 Cucumis melo HOM05D007603 ORTHO05D009604 4.0e-23 112.5 238 43.7
Nitab4.5_0002629g0010 Nicotiana tabacum HOM05D007603 ORTHO05D009604 4.0e-23 112.5 233 42.9
CiPaw.03G182900 Carya illinoinensis HOM05D007603 ORTHO05D009604 5.2e-23 112.1 225 44.0
Dinv06842 Davidia involucrata HOM05D007603 ORTHO05D009604 6.8e-23 111.7 236 43.2
Lsat_1_v5_gn_8_137160 Lactuca sativa HOM05D007603 ORTHO05D009604 8.8e-23 111.3 218 43.1
MSTRG.14321 Avicennia marina HOM05D007603 ORTHO05D009604 2.0e-22 110.2 230 40.4
Sabra13G0102000 Salix brachista HOM05D007603 ORTHO05D009604 2.0e-22 110.2 244 45.5
Atru.chr6.2855 Acer truncatum HOM05D007603 ORTHO05D009604 3.4e-22 109.4 233 43.8
Potri.013G120700 Populus trichocarpa HOM05D007603 ORTHO05D009604 1.3e-21 107.5 245 43.7
Potri.013G072200 Populus trichocarpa HOM05D007603 ORTHO05D009604 1.7e-21 107.1 244 44.3
Actinidia11119 Actinidia chinensis HOM05D007603 ORTHO05D009604 4.8e-21 105.5 213 40.4
TWI23G0636 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 1.4e-20 104.0 229 40.2
Thecc.02G187900 Theobroma cacao HOM05D007603 ORTHO05D009604 1.8e-20 103.6 235 39.1
Sed0026242 Sechium edule HOM05D007603 ORTHO05D009604 2.4e-20 103.2 221 40.7
vmacro12353 Vaccinium macrocarpon HOM05D007603 ORTHO05D009604 2.4e-20 103.2 212 45.3
arahy.Tifrunner.gnm1.ann1.76DKB4 Arachis hypogaea HOM05D007603 ORTHO05D009604 3.1e-20 102.8 240 39.6
TPR.G6485 Trifolium pratense HOM05D007603 ORTHO05D009604 4.1e-20 102.4 211 42.2
VMungo1080G0021 Vigna mungo HOM05D007603 ORTHO05D009604 4.1e-20 102.4 232 36.6
arahy.Tifrunner.gnm1.ann1.M59RYT Arachis hypogaea HOM05D007603 ORTHO05D009604 7.0e-20 101.7 240 39.2
Medtr2g090770 Medicago truncatula HOM05D007603 ORTHO05D009604 1.2e-19 100.9 220 42.7
Ciclev10017455m.g Citrus clementina HOM05D007603 ORTHO05D009604 1.6e-19 100.5 245 39.6
Lalb_Chr14g0367241 Lupinus albus HOM05D007603 ORTHO05D009604 2.0e-19 100.1 224 40.6
PSO541G0270 Papaver somniferum HOM05D007603 ORTHO05D009604 4.5e-19 99.0 244 38.1
Sed0002279 Sechium edule HOM05D007603 ORTHO05D009604 4.5e-19 99.0 229 43.7
Dinv39835 Davidia involucrata HOM05D007603 ORTHO05D009604 1.0e-18 97.8 231 42.0
Phvul.005G099400 Phaseolus vulgaris HOM05D007603 ORTHO05D009604 1.3e-18 97.4 218 39.9
Prupe.3G128600 Prunus persica HOM05D007603 ORTHO05D009604 1.3e-18 97.4 223 41.3
Aqoxy1G02256 Aquilegia oxysepala HOM05D007603 ORTHO05D009604 1.7e-18 97.1 241 38.2
Glyma.12G207700 Glycine max HOM05D007603 ORTHO05D009604 5.0e-18 95.5 212 40.6
Lj3g0007744 Lotus japonicus HOM05D007603 ORTHO05D009604 2.5e-17 93.2 217 40.6
QL08p040785 Quercus lobata HOM05D007603 ORTHO05D009604 3.2e-17 92.8 227 40.1
Haze_13265 Corylus avellana HOM05D007603 ORTHO05D009604 7.2e-17 91.7 228 39.9
Psat5g274200 Pisum sativum HOM05D007603 ORTHO05D009604 1.2e-16 90.9 205 40.5
Cc05_g07840 Coffea canephora HOM05D007603 ORTHO05D009604 3.6e-16 89.4 210 39.5
BcaB02g07727 Brassica carinata HOM05D007603 ORTHO05D009604 6.1e-16 88.6 230 36.1
Gohir.A03G153900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 1.0e-15 87.8 225 37.8
unitig_749.g13962 Utricularia gibba HOM05D007603 ORTHO05D009604 1.4e-15 87.4 219 39.3
PGR042G1843 Punica granatum HOM05D007603 ORTHO05D009604 1.8e-15 87.0 253 37.5
Gohir.D02G176900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 6.8e-15 85.1 226 37.6
TWI14G0603 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 8.8e-15 84.7 228 35.1
PSO675G7067 Papaver somniferum HOM05D007603 ORTHO05D009604 2.0e-14 83.6 243 35.0
FAN02G2478 Fragaria x ananassa HOM05D007603 ORTHO05D009604 4.4e-14 82.4 224 36.2
Sopen07g027470 Solanum pennellii HOM05D007603 ORTHO05D009604 4.4e-14 82.4 245 36.7
CAN.G1543.2 Capsicum annuum HOM05D007603 ORTHO05D009604 5.7e-14 82.0 165 44.8
Nn1g04268 Nelumbo nucifera HOM05D007603 ORTHO05D009604 2.8e-13 79.7 246 34.1
Carub.0005s2128 Capsella rubella HOM05D007603 ORTHO05D009604 3.7e-13 79.3 221 35.3
Nitab4.5_0006973g0020 Nicotiana tabacum HOM05D007603 ORTHO05D009604 4.9e-13 79.0 180 42.8
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 4.9e-13 79.0 197 37.6
CDE10G0532 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 2.4e-12 76.6 211 34.1
BcaC08g44692 Brassica carinata HOM05D007603 ORTHO05D009604 3.1e-12 76.3 231 35.9
C06p22280 Brassica napus HOM05D007603 ORTHO05D009604 3.1e-12 76.3 231 35.9
BolC6t37414H Brassica oleracea HOM05D007603 ORTHO05D009604 3.1e-12 76.3 231 35.9
Glyma.13G293400 Glycine max HOM05D007603 ORTHO05D009604 3.1e-12 76.3 220 37.7
Sp5g07770 Schrenkiella parvula HOM05D007603 ORTHO05D009604 3.1e-12 76.3 246 32.5
CsaV3_7G003160 Cucumis sativus L. HOM05D007603 ORTHO05D009604 4.1e-12 75.9 175 44.0
Aa31sc35G40 Aethionema arabicum HOM05D007603 ORTHO05D009604 7.0e-12 75.1 242 32.6
BraA07t29901Z Brassica rapa HOM05D007603 ORTHO05D009604 9.2e-12 74.7 226 35.4
Cpa.g.sc50.10 Carica papaya HOM05D007603 ORTHO05D009604 9.2e-12 74.7 262 36.3
A07p22220 Brassica napus HOM05D007603 ORTHO05D009604 2.7e-11 73.2 223 34.1
CDE10G1214 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 2.9e-10 69.7 219 32.4
TAR624G0387 Trochodendron aralioides HOM05D007603 ORTHO05D009604 8.6e-10 68.2 155 37.4
Thhalv10010720m.g Eutrema salsugineum HOM05D007603 ORTHO05D009604 1.1e-09 67.8 232 34.5
EL10Ac9g20838 Beta vulgaris HOM05D007603 ORTHO05D009604 1.5e-09 67.4 239 31.4
BcaB01g00169 Brassica carinata HOM05D007603 ORTHO05D009604 1.5e-09 67.4 177 35.0
Hund01003 Selenicereus undatus HOM05D007603 ORTHO05D009604 3.3e-09 66.2 244 29.1
THA.LOC104825256 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 5.6e-09 65.5 238 33.6
MBI06_g00805_MAGBIO Magnolia biondii HOM05D007603 ORTHO05D009604 2.1e-08 63.5 163 36.8
FAN14G3046 Fragaria x ananassa HOM05D007603 ORTHO05D016291 3.6e-08 62.8 204 32.8
A09p47630 Brassica napus HOM05D007603 ORTHO05D009604 8.0e-08 61.6 183 35.5
THA.LOC104823514 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 8.0e-08 61.6 241 32.8
AL5G35760 Arabidopsis lyrata HOM05D007603 ORTHO05D009604 6.8e-07 58.5 224 31.7
AT3G54680 Arabidopsis thaliana HOM05D007603 ORTHO05D009604 8.9e-07 58.2 235 32.3
BcaC07g39795 Brassica carinata HOM05D007603 ORTHO05D009604 3.4e-06 56.2 183 33.3


User provided reference genes

Program Settings